ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast10d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DGKG_MOUSE (Q91WG7) Diacylglycerol kinase gamma (EC 2.7.1.107) (... 30 2.2
2ADHX_MAIZE (P93629) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (... 29 3.8

>DGKG_MOUSE (Q91WG7) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride|
           kinase gamma) (DGK-gamma) (DAG kinase gamma) (88 kDa
           diacylglycerol kinase)
          Length = 788

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 128 HKLLGFEAGRDP*QDPQCSIASTHRRQPP 214
           +KLL  +   +P   PQC+I  TH+ Q P
Sbjct: 738 NKLLPMQVDGEPWMQPQCTIKITHKNQAP 766



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>ADHX_MAIZE (P93629) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol|
           dehydrogenase class III) (S-(hydroxymethyl)glutathione
           dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent
           formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH)
          Length = 381

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 216 EGGCLRCVLAME 181
           EGGCLRCVLAM+
Sbjct: 369 EGGCLRCVLAMQ 380


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,692,823
Number of Sequences: 219361
Number of extensions: 544439
Number of successful extensions: 1217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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