ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast10d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TYRO_CHICK (P55024) Tyrosinase precursor (EC 1.14.18.1) (Monophe... 30 1.6
2TYRO_COTJA (Q08410) Tyrosinase precursor (EC 1.14.18.1) (Monophe... 30 2.2
3YDBC_SCHPO (Q10363) Hypothetical protein C22E12.12 in chromosome I 29 3.7
4TYRO_MOUSE (P11344) Tyrosinase precursor (EC 1.14.18.1) (Monophe... 29 3.7
5TYRO_BOVIN (Q8MIU0) Tyrosinase precursor (EC 1.14.18.1) (Monophe... 28 4.8
6TYRO_RANNI (Q04604) Tyrosinase precursor (EC 1.14.18.1) (Monophe... 28 6.3
7SPRT_SALTY (P60190) Protein sprT 28 6.3
8SPRT_SALTI (P60189) Protein sprT 28 6.3

>TYRO_CHICK (P55024) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase)
          Length = 529

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
 Frame = -2

Query: 215 SYLLIWEMDCWEFCSDC*YEILLVDWRHGEICMVLLRQF--------PSCL-PIAFFYSV 63
           ++LL+WE +  +   D  + I   DWR  E C++   ++        P+ L P +FF S 
Sbjct: 213 AFLLLWEREIQKITGDENFTIPYWDWRDAEDCVICTDEYMGGQHPTNPNLLSPASFFSSW 272

Query: 62  HVL 54
            V+
Sbjct: 273 QVI 275



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>TYRO_COTJA (Q08410) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase) (Fragment)
          Length = 273

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = -2

Query: 215 SYLLIWEMDCWEFCSDC*YEILLVDWRHGEICMVLLRQF--------PSCLPIAFFYS 66
           ++LL+WE +  +   D  + I   DWR  E C++   ++        P+ L  A F+S
Sbjct: 213 AFLLLWEREIQKITGDENFTIPYWDWRDAEDCVICTDEYMGGQHPTNPNLLSPASFFS 270



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>YDBC_SCHPO (Q10363) Hypothetical protein C22E12.12 in chromosome I|
          Length = 96

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 98  ETVVAKPYRFLHASNQLVVSRTNNLNR-IPNNPFPK 202
           E +  +  R LH     V++ TNN+N+ IP  PF K
Sbjct: 23  EAMFYRSSRILHFEEAFVINETNNINQFIPKQPFFK 58



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>TYRO_MOUSE (P11344) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase) (Albino locus protein)
          Length = 533

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
 Frame = -2

Query: 212 YLLIWEMDCWEFCSDC*YEILLVDWRHGEICMVLLRQF--------PSCLPIAFFYS 66
           +LL+WE +  E   D  + +   DWR  E C +   ++        P+ L  A F+S
Sbjct: 214 FLLLWEQEIRELTGDENFTVPYWDWRDAENCDICTDEYLGGRHPENPNLLSPASFFS 270



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>TYRO_BOVIN (Q8MIU0) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase)
          Length = 530

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
 Frame = -2

Query: 212 YLLIWEMDCWEFCSDC*YEILLVDWRHGEICMVLLRQF--------PSCLPIAFFYS 66
           +LL+WE +  +   D  + I   DWR  E C V   ++        P+ L  A F+S
Sbjct: 214 FLLLWEQEIQKLTGDENFTIPYWDWRDAENCDVCTDEYMGGRNPANPNLLSPASFFS 270



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>TYRO_RANNI (Q04604) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase)
          Length = 532

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 212 YLLIWEMDCWEFCSDC*YEILLVDWRHGEICMVLLRQF 99
           YLL+WE +  +   D  + I   DWR  + C +   +F
Sbjct: 218 YLLLWEREIQKVTGDDNFTIPFWDWRDAQQCELCTDEF 255



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>SPRT_SALTY (P60190) Protein sprT|
          Length = 165

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 20  HQFHHALQLEHLGHEQSKRMLWADMMETVVAKPYRFLH 133
           H+  H L  +H G +      W  MME+V+  P R  H
Sbjct: 78  HELAHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTH 115



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>SPRT_SALTI (P60189) Protein sprT|
          Length = 165

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 20  HQFHHALQLEHLGHEQSKRMLWADMMETVVAKPYRFLH 133
           H+  H L  +H G +      W  MME+V+  P R  H
Sbjct: 78  HELAHLLVWKHFGRKAPHGKEWKWMMESVLGVPARRTH 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,025,621
Number of Sequences: 219361
Number of extensions: 573976
Number of successful extensions: 1313
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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