>PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3)
          Length = 250

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = -2

Query: 242 VQPGTGEVQYQVCSPDAMGKLLAKAGLTQPAPEA 141
           +QPGTGEVQYQVCSP+AMGKLLAKAGL+QPAPEA
Sbjct: 217 LQPGTGEVQYQVCSPEAMGKLLAKAGLSQPAPEA 250

>PSA4_PETHY (O82530) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3)
          Length = 249

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -2

Query: 227 GEVQYQVCSPDAMGKLLAKAGLTQPAPE 144
           G+V+YQ CSP+ +  +L K+GLTQP+ E
Sbjct: 220 GKVKYQACSPEKLNSMLVKSGLTQPSAE 247

>PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3) (Proteasome 27 kDa subunit)
          Length = 250

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 16/29 (55%), Positives = 25/29 (86%)
 Frame = -2

Query: 230 TGEVQYQVCSPDAMGKLLAKAGLTQPAPE 144
           +G+V+YQV SP+++ +LL ++GLTQPA E
Sbjct: 220 SGKVKYQVHSPESLNRLLTESGLTQPAAE 248

>PSA4_ARATH (O81148) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome|
           subunit alpha type 3) (20S proteasome alpha subunit C-1)
           (Proteasome 27 kDa subunit) (Proteasome component 9)
          Length = 250

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 221 VQYQVCSPDAMGKLLAKAGLTQPAPE 144
           V+Y V SP+++ KLL K G+TQPA E
Sbjct: 223 VKYHVHSPESLTKLLVKHGVTQPAAE 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,462,799
Number of Sequences: 219361
Number of extensions: 534447
Number of successful extensions: 1626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)