| Clone Name | rbast10a07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence Length = 185777 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ttacatcaaagttcaaacctt 61 ||||||||||||||||||||| Sbjct: 74464 ttacatcaaagttcaaacctt 74444
>gb|AC139746.15| Medicago truncatula clone mth2-17b20, complete sequence Length = 118157 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcaaagttcaaaccttagga 65 |||||||||||||||||||| Sbjct: 237 tcaaagttcaaaccttagga 256
>gb|AC148177.13| Medicago truncatula clone mth2-4c9, complete sequence Length = 117329 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcaaagttcaaaccttagga 65 |||||||||||||||||||| Sbjct: 58004 tcaaagttcaaaccttagga 58023
>emb|CT573041.4| Platypus DNA sequence from clone CLM1-404E12, complete sequence Length = 53489 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tccctccccactttttccaa 91 |||||||||||||||||||| Sbjct: 36205 tccctccccactttttccaa 36186
>ref|XM_426050.1| PREDICTED: Gallus gallus similar to predicted CDS, endonuclease/exonuclease/phosphatase family and RNA-directed DNA polymerase (XR69) (LOC428494), mRNA Length = 444 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 acaggacaggtcccagtac 22 ||||||||||||||||||| Sbjct: 316 acaggacaggtcccagtac 298
>gb|AC114403.15| Mus musculus chromosome 1, clone RP23-197H1, complete sequence Length = 221305 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 caggacaggtcccagtacc 23 ||||||||||||||||||| Sbjct: 148259 caggacaggtcccagtacc 148277
>emb|AL662806.20| Mouse DNA sequence from clone RP23-273O7 on chromosome 11 Contains the 5' end of the Cyfip2 gene for cytoplasmic FMR1 interacting protein 2, the Itk gene for IL2-inducible T-cell kinase, two novel genes and a CpG island, complete sequence Length = 161754 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 catggtccctccccacttt 85 ||||||||||||||||||| Sbjct: 118271 catggtccctccccacttt 118253
>gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, complete sequence Length = 122012 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agcacaggacaggtcccag 19 ||||||||||||||||||| Sbjct: 56026 agcacaggacaggtcccag 56044
>gb|AF400586.1|AF400586 Acinetobacter johnsonii mismatch repair protein (mutS) gene, partial cds Length = 2772 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 acatcaaagttcaaacctt 61 ||||||||||||||||||| Sbjct: 267 acatcaaagttcaaacctt 285
>emb|AL163872.2|CNS05TBN Human chromosome 14 DNA sequence BAC R-76E12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168486 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 gttttatttggacacagca 189 ||||||||||||||||||| Sbjct: 31426 gttttatttggacacagca 31408
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 38.2 bits (19), Expect = 9.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 160 catcgcacacggttttatttggacaca 186 ||||||||||| ||||||||| ||||| Sbjct: 128878 catcgcacacgattttatttgcacaca 128852
>emb|AL355098.3|CNS05TCH Human chromosome 14 DNA sequence BAC R-241E13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 153094 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 171 gttttatttggacacagca 189 ||||||||||||||||||| Sbjct: 96310 gttttatttggacacagca 96292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,112,008 Number of Sequences: 3902068 Number of extensions: 1112008 Number of successful extensions: 81534 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81507 Number of HSP's gapped (non-prelim): 27 length of query: 191 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 169 effective length of database: 17,147,199,772 effective search space: 2897876761468 effective search space used: 2897876761468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)