>ref|XM_550586.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2943

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                        
Query: 185  tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
            |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 2943 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 2884

                         
Query: 245  gctgttgtcgccg 257
            |||||||||||||
Sbjct: 2883 gctgttgtcgccg 2871

>gb|AY332474.1| Oryza sativa (japonica cultivar-group) transmembrane protein kinase
            (PK3) mRNA, complete cds
          Length = 3184

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                        
Query: 185  tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
            |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 3056 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 2997

                         
Query: 245  gctgttgtcgccg 257
            |||||||||||||
Sbjct: 2996 gctgttgtcgccg 2984

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                           
Query: 185     tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
               |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 1610952 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 1610893

                            
Query: 245     gctgttgtcgccg 257
               |||||||||||||
Sbjct: 1610892 gctgttgtcgccg 1610880

>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0493C11
          Length = 143113

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                         
Query: 185   tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
             |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 14114 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 14055

                          
Query: 245   gctgttgtcgccg 257
             |||||||||||||
Sbjct: 14054 gctgttgtcgccg 14042

>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0538C01
          Length = 155643

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                          
Query: 185    tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
              |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 139676 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 139617

                           
Query: 245    gctgttgtcgccg 257
              |||||||||||||
Sbjct: 139616 gctgttgtcgccg 139604

>dbj|AK064052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E11, full
            insert sequence
          Length = 1881

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                        
Query: 185  tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
            |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 1423 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 1364

                         
Query: 245  gctgttgtcgccg 257
            |||||||||||||
Sbjct: 1363 gctgttgtcgccg 1351

>dbj|AP000395.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           G8010 RFLP marker
          Length = 1924

 Score =  105 bits (53), Expect = 7e-20
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                       
Query: 185 tcacatggtgtgcttggagatgacctcgccgaatcgcacgaaccactgctcgtcggagga 244
           |||||| ||||||||||| |||||||||||||| |  |||||||||||||||||||||||
Sbjct: 181 tcacattgtgtgcttggatatgacctcgccgaacctgacgaaccactgctcgtcggagga 122

                        
Query: 245 gctgttgtcgccg 257
           |||||||||||||
Sbjct: 121 gctgttgtcgccg 109

>gb|DQ334102.1| Drosophila miranda CG14967 gene, partial cds
          Length = 1038

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 237 tcggaggagctgttgtcgccgtgg 260
           ||||||||||||||||||||||||
Sbjct: 628 tcggaggagctgttgtcgccgtgg 651

>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete sequence
          Length = 176510

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    cacggtcatggtcacggtcac 188
              |||||||||||||||||||||
Sbjct: 146362 cacggtcatggtcacggtcac 146382

>gb|BC063771.1| Mus musculus cDNA clone IMAGE:30141912, partial cds
          Length = 1735

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 168 cacggtcatggtcacggtcac 188
           |||||||||||||||||||||
Sbjct: 224 cacggtcatggtcacggtcac 204

>ref|NM_172500.1| Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), mRNA
          Length = 5069

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  cacggtcatggtcacggtcac 188
            |||||||||||||||||||||
Sbjct: 3609 cacggtcatggtcacggtcac 3589

>dbj|AK166152.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730047L17 product:Hypothetical spectrin
            repeat containing protein homolog [Mus musculus], full
            insert sequence
          Length = 2959

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  cacggtcatggtcacggtcac 188
            |||||||||||||||||||||
Sbjct: 1473 cacggtcatggtcacggtcac 1453

>dbj|AK029216.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4831426I19 product:hypothetical Spectrin
            repeat containing protein, full insert sequence
          Length = 5069

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  cacggtcatggtcacggtcac 188
            |||||||||||||||||||||
Sbjct: 3609 cacggtcatggtcacggtcac 3589

>dbj|AK030542.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
            enriched library, clone:5330429E21 product:hypothetical
            protein, full insert sequence
          Length = 3080

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  cacggtcatggtcacggtcac 188
            |||||||||||||||||||||
Sbjct: 1599 cacggtcatggtcacggtcac 1579

>ref|XM_235488.3| PREDICTED: Rattus norvegicus CDC42 effector protein (Rho GTPase
           binding) 1 (predicted) (Cdc42ep1_predicted), mRNA
          Length = 1269

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 168 cacggtcatggtcacggtcac 188
           |||||||||||||||||||||
Sbjct: 646 cacggtcatggtcacggtcac 626

>dbj|AK119739.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F05, full
            insert sequence
          Length = 4633

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 168  cacggtcatggtcacggtcac 188
            |||||||||||||||||||||
Sbjct: 4113 cacggtcatggtcacggtcac 4093

>gb|AY826120.1| Aedes albopictus clone AL_14 30 kDa salivary gland allergen 30k-2
           mRNA, complete cds
          Length = 633

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  atttttccctgcactgtgct 75
           ||||||||||||||||||||
Sbjct: 581 atttttccctgcactgtgct 562

>gb|AY826119.1| Aedes albopictus clone AL-7-90-90-15-CLU putative 30 kDa
           allergen-like protein 30k-1 mRNA, complete cds
          Length = 633

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  atttttccctgcactgtgct 75
           ||||||||||||||||||||
Sbjct: 581 atttttccctgcactgtgct 562

>gb|AC132262.2| Mus musculus chromosome 5 clone RP24-370J24, complete sequence
          Length = 176466

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    atttttccctgcactgtgct 75
             ||||||||||||||||||||
Sbjct: 50661 atttttccctgcactgtgct 50680

>ref|XM_960674.1| Neurospora crassa OR74A hypothetical protein (NCU00627.1) partial
            mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cacggtcatggtcacggtca 187
            ||||||||||||||||||||
Sbjct: 1225 cacggtcatggtcacggtca 1206

>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete
            sequence
          Length = 216207

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   atttttccctgcactgtgct 75
            ||||||||||||||||||||
Sbjct: 9199 atttttccctgcactgtgct 9180

>ref|XM_324806.1| Neurospora crassa OR74A hypothetical protein (NCU00627.1) partial
            mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cacggtcatggtcacggtca 187
            ||||||||||||||||||||
Sbjct: 1225 cacggtcatggtcacggtca 1206

>gb|AC104101.5| Mus musculus BAC clone RP24-377D2 from chromosome 5, complete sequence
          Length = 185414

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     atttttccctgcactgtgct 75
              ||||||||||||||||||||
Sbjct: 138114 atttttccctgcactgtgct 138095

>gb|AC121603.4| Mus musculus BAC clone RP23-310D9 from 18, complete sequence
          Length = 195555

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    atgctacagcttggggagga 144
              ||||||||||||||||||||
Sbjct: 183980 atgctacagcttggggagga 183999

>emb|AL357060.31| Human DNA sequence from clone RP11-356I2 on chromosome 6 Contains three
              novel genes, the TNFAIP3 gene for tumour necrosis factor
              alpha-induced protein 3 and a CpG island, complete sequence
          Length = 182209

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     ttttccctgcactgtgctct 77
              ||||||||||||||||||||
Sbjct: 148909 ttttccctgcactgtgctct 148890

>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds
          Length = 1962

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  ctcgtcggaggagctgttgt 252
            ||||||||||||||||||||
Sbjct: 1020 ctcgtcggaggagctgttgt 1039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,055,053
Number of Sequences: 3902068
Number of extensions: 2055053
Number of successful extensions: 35873
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35817
Number of HSP's gapped (non-prelim): 56
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)