ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast09b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide s... 595 e-167
2gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) m... 109 5e-21
3gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full... 84 3e-13
4gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete... 46 0.066
5gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell ... 46 0.066
6gb|AC022343.2|AC022343 Drosophila melanogaster, chromosome X, re... 46 0.066
7gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 ... 46 0.066
8gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 o... 46 0.066
9emb|AL138971.1|DMBR43E12 Drosophila melanogaster BAC clone BACR4... 46 0.066
10emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in... 44 0.26
11gb|AC120982.2| Homo sapiens chromosome 19 clone LLNLR-289A1, com... 44 0.26
12gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, com... 42 1.0
13gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co... 42 1.0
14emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chr... 42 1.0
15gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosom... 42 1.0
16gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosom... 42 1.0
17gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome... 42 1.0
18gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map... 42 1.0
19gb|AF499544.1| Wilsonia pusilla isolate 76 mitochondrial control... 42 1.0
20gb|AF499538.1| Wilsonia pusilla isolate 70 mitochondrial control... 42 1.0
21emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid con... 42 1.0
22emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on ch... 42 1.0
23emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chr... 42 1.0
24dbj|AB035859.1| Coturnix coturnix japonica DNA, microsatellite G... 42 1.0
25gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331... 42 1.0
26dbj|AK159060.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 42 1.0
27gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, com... 42 1.0
28gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence 42 1.0
29emb|BX572080.18| Zebrafish DNA sequence from clone DKEY-22N17 in... 42 1.0
30gb|AC102262.9| Mus musculus chromosome 15, clone RP24-216B4, com... 42 1.0
31emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, ... 42 1.0
32gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 42 1.0
33gb|AY780525.1| Bacillus sp. MB24 transposon TnARS1, complete seq... 40 4.0
34gb|AY022493.1| Oryza sativa microsatellite MRG4818 containing (A... 40 4.0
35gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.0
36gb|AC122060.3| Mus musculus BAC clone RP24-468P4 from chromosome... 40 4.0
37gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, co... 40 4.0
38gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, co... 40 4.0
39gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, co... 40 4.0
40emb|AJ427928.1|ABI427928 Adalia bipunctata microsatellite DNA, c... 40 4.0
41gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosom... 40 4.0
42gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, compl... 40 4.0
43gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, comple... 40 4.0
44gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, comple... 40 4.0
45gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete se... 40 4.0
46gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete se... 40 4.0
47gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete s... 40 4.0
48gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete s... 40 4.0
49emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 o... 40 4.0
50emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chr... 40 4.0
51emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chr... 40 4.0
52gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, com... 40 4.0
53gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cance... 40 4.0
54gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosom... 40 4.0
55gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Can... 40 4.0
56emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4,... 40 4.0
57emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5,... 40 4.0
58emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in... 40 4.0
59emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 i... 40 4.0
60emb|BX294444.7| Zebrafish DNA sequence from clone CH211-281E15 i... 40 4.0
61emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in... 40 4.0
62gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, com... 40 4.0
63gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, co... 40 4.0
64gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, comp... 40 4.0
65gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, com... 40 4.0
66gb|DQ020086.1| Heliconius melpomene clone Hm16 microsatellite se... 40 4.0
67gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's ... 40 4.0
68emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 i... 40 4.0
69gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 m... 40 4.0
70gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-29... 40 4.0
71gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Can... 40 4.0
72dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
73dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
74gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Canc... 40 4.0
75gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosom... 40 4.0
76gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complet... 40 4.0
77gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, comple... 40 4.0
78gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complet... 40 4.0
79emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chr... 40 4.0
80emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 ma... 40 4.0
81gb|AF398400.1| Beauveria bassiana isolate Bsp 590 small subunit ... 40 4.0
82gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 4.0
83emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on ch... 40 4.0 
>emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide synthase (aos gene)
          Length = 1819

 Score =  595 bits (300), Expect = e-167
 Identities = 307/308 (99%), Gaps = 1/308 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 1755

                                                                        
Query: 61   caaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaagcaaccgaa 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1754 caaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaag-aaccgaa 1696

                                                                        
Query: 121  caagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatatagcgag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 caagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatatagcgag 1636

                                                                        
Query: 181  gcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgatccctt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 gcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgatccctt 1576

                                                                        
Query: 241  tgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgttgcct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 tgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgttgcct 1516

                    
Query: 301  tggtgacg 308
            ||||||||
Sbjct: 1515 tggtgacg 1508
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>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds
          Length = 1779

 Score =  109 bits (55), Expect = 5e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Minus

                                                                        
Query: 14   gaatcttattgtagaaaagtccggcttattacactgggcaagattgccaaaagtaaacac 73
            ||||||||||  || ||||| |||||||||||||||||||||||||| ||||||||    
Sbjct: 1746 gaatcttattacaggaaagtacggcttattacactgggcaagattgcgaaaagtaa---- 1691

                                                                        
Query: 74   aacacacgcacacatacacgagggcacaatgctgcgaagcaaccgaacaagatgcatgca 133
            ||||| | ||||||||||| ||||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 1690 aacacgcacacacatacacaagggcaccatgcagcgaagcaaccggacaaggtgcatgca 1631



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 171  atatagcgaggcacgtacgtacgtacgtgatgacgg 206
            |||||||||||||||||||||||| |||| ||||||
Sbjct: 1606 atatagcgaggcacgtacgtacgtgcgtgctgacgg 1571
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>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA
            sequence
          Length = 1870

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1    acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 60
            ||||||| || | ||||||||||  || ||||||||||||||||||||||||||||||||
Sbjct: 1824 acgccaagagtgagaatcttattacaggaaagtccggcttattacactgggcaagattgc 1765

                      
Query: 61   caaaagtaaa 70
             |||||||||
Sbjct: 1764 gaaaagtaaa 1755



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 102  atgctgcgaagcaaccgaacaagatgcatgca 133
            |||| |||||||||||||||||||||||||||
Sbjct: 1718 atgcagcgaagcaaccgaacaagatgcatgca 1687



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 171  atatagcgaggcacgtacgtacgt 194
            ||||||||||||||||||||||||
Sbjct: 1665 atatagcgaggcacgtacgtacgt 1642
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>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence
          Length = 181052

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 70     acacaacacacgcacacatacac 92
              |||||||||||||||||||||||
Sbjct: 104684 acacaacacacgcacacatacac 104662
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>gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181395

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 75    acacacgcacacatacacgaggg 97
             |||||||||||||||||||||||
Sbjct: 68544 acacacgcacacatacacgaggg 68522
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>gb|AC022343.2|AC022343 Drosophila melanogaster, chromosome X, region 12E-12F, BAC clone
              BACR33F13, complete sequence
          Length = 164853

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 70     acacaacacacgcacacatacac 92
              |||||||||||||||||||||||
Sbjct: 161072 acacaacacacgcacacatacac 161094
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>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete
              sequence
          Length = 299868

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 70     acacaacacacgcacacatacac 92
              |||||||||||||||||||||||
Sbjct: 103225 acacaacacacgcacacatacac 103247
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>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete
              sequence
          Length = 309053

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 75     acacacgcacacatacacgaggg 97
              |||||||||||||||||||||||
Sbjct: 221237 acacacgcacacatacacgaggg 221215
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>emb|AL138971.1|DMBR43E12 Drosophila melanogaster BAC clone BACR43E12
          Length = 102621

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 75    acacacgcacacatacacgaggg 97
             |||||||||||||||||||||||
Sbjct: 51435 acacacgcacacatacacgaggg 51413
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>emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in linkage group 7,
             complete sequence
          Length = 180396

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 67    taaacacaacacacgcacacatacac 92
             |||||||||||||| |||||||||||
Sbjct: 99571 taaacacaacacacacacacatacac 99596
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>gb|AC120982.2| Homo sapiens chromosome 19 clone LLNLR-289A1, complete sequence
          Length = 32173

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    acacaacacacgcacacataca 91
             ||||||||||||||||||||||
Sbjct: 21490 acacaacacacgcacacataca 21511
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>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence
          Length = 194261

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 68     aaacacaacacacgcacacatacac 92
              ||||||||||||| |||||||||||
Sbjct: 158060 aaacacaacacacacacacatacac 158036
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>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aaacacaacacacgcacacat 88
              |||||||||||||||||||||
Sbjct: 150304 aaacacaacacacgcacacat 150324
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>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete
             sequence
          Length = 226435

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 13201 aaacacaacacacacacacatacac 13177
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>gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosome 10, complete
             sequence
          Length = 150502

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 59535 aaacacaacacacacacacatacac 59511
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>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence
          Length = 207817

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     aaacacaacacacgcacacatacac 92
              ||||||||||||| |||||||||||
Sbjct: 162059 aaacacaacacacacacacatacac 162083
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>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence
          Length = 193830

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    acacacgcacacatacacgagggca 99
             |||||||||||||||||| ||||||
Sbjct: 74496 acacacgcacacatacacaagggca 74472
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>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence
          Length = 179382

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 22724 aaacacaacacacacacacatacac 22748
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>gb|AF499544.1| Wilsonia pusilla isolate 76 mitochondrial control region, partial
           sequence
          Length = 343

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gaggcacgtacgtacgtacgt 198
           |||||||||||||||||||||
Sbjct: 57  gaggcacgtacgtacgtacgt 77
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>gb|AF499538.1| Wilsonia pusilla isolate 70 mitochondrial control region, partial
           sequence
          Length = 343

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 gaggcacgtacgtacgtacgt 198
           |||||||||||||||||||||
Sbjct: 57  gaggcacgtacgtacgtacgt 77
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>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14
          Length = 68050

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   cgtacactactaaggtagata 173
             |||||||||||||||||||||
Sbjct: 24283 cgtacactactaaggtagata 24303
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>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete
             sequence
          Length = 196122

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 18467 aaacacaacacacacacacatacac 18443
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>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete
             sequence
          Length = 202812

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 63131 aaacacaacacacacacacatacac 63107
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>dbj|AB035859.1| Coturnix coturnix japonica DNA, microsatellite GUJ0049 sequence
          Length = 243

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  aaacacaacacacgcacacatacac 92
           |||||||||||||||||||| ||||
Sbjct: 130 aaacacaacacacgcacacacacac 154
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>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence
          Length = 198695

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     acacacgcacacatacacgagggca 99
              |||||||||||||||||| ||||||
Sbjct: 120282 acacacgcacacatacacaagggca 120306
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>dbj|AK159060.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K530047H15 product:hypothetical protein,
           full insert sequence
          Length = 4837

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 75  acacacgcacacatacacgagggca 99
           |||||||||||||||||| ||||||
Sbjct: 496 acacacgcacacatacacaagggca 472
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>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence
          Length = 208509

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     acacacgcacacatacacgagggca 99
              |||||| ||||||||||||||||||
Sbjct: 175831 acacacacacacatacacgagggca 175807
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>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence
          Length = 166987

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 69     aacacaacacacgcacacatacacg 93
              |||||||||| ||||||||||||||
Sbjct: 148735 aacacaacacgcgcacacatacacg 148759
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>emb|BX572080.18| Zebrafish DNA sequence from clone DKEY-22N17 in linkage group 13,
              complete sequence
          Length = 224120

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     acacacgcacacatacacgag 95
              |||||||||||||||||||||
Sbjct: 206971 acacacgcacacatacacgag 206951
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>gb|AC102262.9| Mus musculus chromosome 15, clone RP24-216B4, complete sequence
          Length = 191626

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     acacacgcacacatacacgagggca 99
              |||||| ||||||||||||||||||
Sbjct: 140059 acacacacacacatacacgagggca 140083
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>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence
          Length = 171830

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     acacacgcacacatacacgag 95
              |||||||||||||||||||||
Sbjct: 140933 acacacgcacacatacacgag 140953
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 68    aaacacaacacacgcacacatacac 92
             ||||||||||||| |||||||||||
Sbjct: 62147 aaacacaacacacacacacatacac 62171
to top
>gb|AY780525.1| Bacillus sp. MB24 transposon TnARS1, complete sequence
          Length = 13790

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  aagcaaccgaacaagatgca 129
            ||||||||||||||||||||
Sbjct: 4548 aagcaaccgaacaagatgca 4567
to top
>gb|AY022493.1| Oryza sativa microsatellite MRG4818 containing (AGT)X12, genomic
           sequence
          Length = 236

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 gcacgtacgtacgtacgtga 200
           ||||||||||||||||||||
Sbjct: 213 gcacgtacgtacgtacgtga 194
to top
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   gcacgtacgtacgtacgtga 200
             ||||||||||||||||||||
Sbjct: 13654 gcacgtacgtacgtacgtga 13673
to top
>gb|AC122060.3| Mus musculus BAC clone RP24-468P4 from chromosome 12, complete
           sequence
          Length = 170916

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  caacacacgcacacatacac 92
           ||||||||||||||||||||
Sbjct: 117 caacacacgcacacatacac 98
to top
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence
          Length = 159753

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 69   aacacaacacacgcacacatacac 92
            |||||||||||| |||||||||||
Sbjct: 7081 aacacaacacacacacacatacac 7058
to top
>gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, complete sequence
          Length = 172076

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 83908 aacacaacacacgcacacacacac 83931
to top
>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence
          Length = 224351

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             |||||||||||| |||||||||||
Sbjct: 26137 aacacaacacacacacacatacac 26160
to top
>emb|AJ427928.1|ABI427928 Adalia bipunctata microsatellite DNA, clone Ab5
          Length = 126

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 69 aacacaacacacgcacacatacac 92
          ||||||||||||||||||| ||||
Sbjct: 83 aacacaacacacgcacacacacac 60
to top
>gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosome 8, complete sequence
          Length = 221035

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ttgccaaaagtaaacacaac 76
              ||||||||||||||||||||
Sbjct: 147001 ttgccaaaagtaaacacaac 146982
to top
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence
          Length = 188243

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   caacacacgcacacatacac 92
            ||||||||||||||||||||
Sbjct: 5678 caacacacgcacacatacac 5697
to top
>gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, complete sequence
          Length = 180922

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 58    tgccaaaagtaaacaca-acacacgcacacatacac 92
             ||||||||||||||||| |||||| |||||| ||||
Sbjct: 12154 tgccaaaagtaaacacacacacacacacacacacac 12189
to top
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence
          Length = 183991

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 69   aacacaacacacgcacacatacac 92
            ||||||||||||||||||| ||||
Sbjct: 2289 aacacaacacacgcacacacacac 2266
to top
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence
          Length = 119355

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 32998 aacacaacacacgcacacacacac 33021
to top
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     aacacaacacacgcacacatacac 92
              ||||||||||||||||||| ||||
Sbjct: 120658 aacacaacacacgcacacacacac 120635
to top
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence
          Length = 145905

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 12879 aacacaacacacgcacacacacac 12902
to top
>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence
          Length = 88701

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 69   aacacaacacacgcacacatacac 92
            ||||||||||||||||||| ||||
Sbjct: 6406 aacacaacacacgcacacacacac 6383
to top
>emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 on chromosome Xp22.11-22.2,
             complete sequence
          Length = 134403

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 61    caaaagtaaacacaacacacgcacacatacac 92
             |||||| | |||| ||||||||||||||||||
Sbjct: 87453 caaaagaatacaccacacacgcacacatacac 87422
to top
>emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chromosome 1 Contains part of
              the NEGR1 gene for neuronal growth regulator 1, complete
              sequence
          Length = 149587

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ttgccaaaagtaaacacaac 76
              ||||||||||||||||||||
Sbjct: 115371 ttgccaaaagtaaacacaac 115352
to top
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the
             5' end of the RAB3B gene for RAB3B member RAS oncogene
             family, a 40s ribosomal protein S26 (RPS26) pseudogene,
             the gene for endoplasmic reticulum thioredoxin superfamily
             member 18 kDa (TLP19), three novel genes, the 5' end of
             the gene for a novel protein similar to RNA polymerase B
             transcription factor 3 (MGC23908) and a CpG island,
             complete sequence
          Length = 142790

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             |||||||||||| |||||||||||
Sbjct: 80627 aacacaacacacacacacatacac 80604
to top
>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence
          Length = 154201

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  aagatgcatgcacatgcatg 141
            ||||||||||||||||||||
Sbjct: 2136 aagatgcatgcacatgcatg 2117
to top
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC
              Library) complete sequence
          Length = 146175

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     aacacaacacacgcacacatacac 92
              |||||||||||| |||||||||||
Sbjct: 128194 aacacaacacacacacacatacac 128171
to top
>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete sequence
          Length = 193801

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     cacacatacacgagggcacaatgc 105
              |||||||||| |||||||||||||
Sbjct: 155246 cacacatacaggagggcacaatgc 155269
to top
>gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 172752

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             |||||||||||| |||||||||||
Sbjct: 38593 aacacaacacacacacacatacac 38570
to top
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
              complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    acgtacgtacgtacgtgatg 202
              ||||||||||||||||||||
Sbjct: 119570 acgtacgtacgtacgtgatg 119589
to top
>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE
          Length = 199033

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 57867 aacacaacacacgcacacacacac 57890



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 43743 aacacaacacacgcacacacacac 43766
to top
>emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in linkage group 25,
             complete sequence
          Length = 187055

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    taaacacaacacacgcacac 86
             ||||||||||||||||||||
Sbjct: 60071 taaacacaacacacgcacac 60052
to top
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17,
              complete sequence
          Length = 161999

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     aacacacgcacacatacacg 93
              ||||||||||||||||||||
Sbjct: 153412 aacacacgcacacatacacg 153393
to top
>emb|BX294444.7| Zebrafish DNA sequence from clone CH211-281E15 in linkage group 14,
              complete sequence
          Length = 169694

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 65     agtaaacacaacacacgcacacatacac 92
              |||||||||||||||| |||||| ||||
Sbjct: 155608 agtaaacacaacacacacacacacacac 155581
to top
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23,
             complete sequence
          Length = 74936

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aaacacaacacacgcacaca 87
             ||||||||||||||||||||
Sbjct: 39618 aaacacaacacacgcacaca 39599
to top
>gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, complete sequence
          Length = 163180

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 68     aaacacaacacacgcacacataca 91
              ||||||||||||| ||||||||||
Sbjct: 111135 aaacacaacacacacacacataca 111158
to top
>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence
          Length = 187380

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    aagatgcatgcacatgcatg 141
              ||||||||||||||||||||
Sbjct: 178893 aagatgcatgcacatgcatg 178874
to top
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence
          Length = 180650

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 65    agtaaacacaacacacgcacacatacac 92
             |||| ||||||||||| |||||||||||
Sbjct: 72971 agtacacacaacacacacacacatacac 72998
to top
>gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, complete sequence
          Length = 180160

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    acaacacacgcacacatacacgag 95
             |||||||||||||||| |||||||
Sbjct: 34958 acaacacacgcacacacacacgag 34935
to top
>gb|DQ020086.1| Heliconius melpomene clone Hm16 microsatellite sequence
          Length = 269

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 70  acacaacacacgcacacatacacg 93
           ||||||||||| ||||||||||||
Sbjct: 119 acacaacacacacacacatacacg 96
to top
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 65     agtaaacacaacacacgcacacatacac 92
              ||||| ||||||||||||||||| ||||
Sbjct: 101300 agtaatcacaacacacgcacacaaacac 101273
to top
>emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 in linkage group 23,
             complete sequence
          Length = 107132

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aaacacaacacacgcacaca 87
             ||||||||||||||||||||
Sbjct: 45043 aaacacaacacacgcacaca 45024
to top
>gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 map 18q21, complete sequence
          Length = 180000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     acaacacacgcacacatacacgag 95
              |||||||||||||||| |||||||
Sbjct: 166575 acaacacacgcacacacacacgag 166598
to top
>gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-297D21, complete sequence
          Length = 200618

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             |||||||||||| |||||||||||
Sbjct: 42154 aacacaacacacacacacatacac 42177
to top
>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190387

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             |||||||||||| |||||||||||
Sbjct: 77774 aacacaacacacacacacatacac 77751
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     acgtacgtacgtacgtgatg 202
               ||||||||||||||||||||
Sbjct: 3653278 acgtacgtacgtacgtgatg 3653297
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 181      gcacgtacgtacgtacgtga 200
                ||||||||||||||||||||
Sbjct: 29529152 gcacgtacgtacgtacgtga 29529171
to top
>gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128729

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    aacacaacacacgcacacatacac 92
             ||||||||||||||||||| ||||
Sbjct: 36559 aacacaacacacgcacacacacac 36536
to top
>gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosome 13, complete sequence
          Length = 186758

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     cacacatacacgagggcacaatgc 105
              |||||||||| |||||||||||||
Sbjct: 161348 cacacatacaggagggcacaatgc 161325
to top
>gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complete sequence
          Length = 196288

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                  
Query: 58     tgccaaaagtaaacaca-acacacgcacacatacac 92
              ||||||||||||||||| |||||| |||||| ||||
Sbjct: 167863 tgccaaaagtaaacacacacacacacacacacacac 167898
to top
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence
          Length = 219234

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     caacacacgcacacatacac 92
              ||||||||||||||||||||
Sbjct: 182046 caacacacgcacacatacac 182027
to top
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence
          Length = 198621

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    acacaacacacgcacacatacacg 93
             |||||||||| |||||||||||||
Sbjct: 32968 acacaacacatgcacacatacacg 32945
to top
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     caacacacgcacacatacac 92
              ||||||||||||||||||||
Sbjct: 217293 caacacacgcacacatacac 217274
to top
>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete
             sequence
          Length = 145822

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 61    caaaagtaaacacaacacacgcacacatacac 92
             |||||| | |||| ||||||||||||||||||
Sbjct: 30697 caaaagaatacactacacacgcacacatacac 30728
to top
>gb|AF398400.1| Beauveria bassiana isolate Bsp 590 small subunit ribosomal RNA
           gene, partial sequence
          Length = 462

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 ggcacgtacgtacgtacgtg 199
           ||||||||||||||||||||
Sbjct: 170 ggcacgtacgtacgtacgtg 189
to top
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gcacgtacgtacgtacgtga 200
              ||||||||||||||||||||
Sbjct: 113422 gcacgtacgtacgtacgtga 113441
to top
>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete
             sequence
          Length = 175689

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acaacacacgcacacataca 91
             ||||||||||||||||||||
Sbjct: 95655 acaacacacgcacacataca 95636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,302,601
Number of Sequences: 3902068
Number of extensions: 2302601
Number of successful extensions: 174463
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 173867
Number of HSP's gapped (non-prelim): 595
length of query: 308
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 286
effective length of database: 17,147,199,772
effective search space: 4904099134792
effective search space used: 4904099134792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top