>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score = 67.9 bits (34), Expect = 1e-09
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 1    aaaatggccccaacgttgctataattgatttagggaag 38
            |||||||| |||||||||||||||||||||||||||||
Sbjct: 1401 aaaatggcaccaacgttgctataattgatttagggaag 1364

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 11      caacgttgctataattgatttagg 34
               |||| |||||||||||||||||||
Sbjct: 9412547 caacattgctataattgatttagg 9412524

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     caacgttgctataattgatttagg 34
              |||| |||||||||||||||||||
Sbjct: 109947 caacattgctataattgatttagg 109924

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 11      caacgttgctataattgatttagg 34
               |||| |||||||||||||||||||
Sbjct: 9410668 caacattgctataattgatttagg 9410645

>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   caacgttgctataattgatttagg 34
            |||| |||||||||||||||||||
Sbjct: 1797 caacattgctataattgatttagg 1774

>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  caacgttgctataattgatttagg 34
           |||| |||||||||||||||||||
Sbjct: 462 caacattgctataattgatttagg 439

>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score = 40.1 bits (20), Expect = 0.25
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   caacgttgctataattgatttagg 34
            |||| |||||||||||||||||||
Sbjct: 1408 caacattgctataattgatttagg 1385

>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence
          Length = 212172

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 91951 ttgctataattgatttggggaag 91929

>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence
          Length = 130492

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 23860 ttgctataattgatttggggaag 23838

>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence
          Length = 200015

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 18509 ttgctataattgatttggggaag 18487

>gb|AC151300.2| Xenopus tropicalis clone CH216-107C14, complete sequence
          Length = 134023

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 30334 ttgctataattgatttggggaag 30356

>gb|AC147215.4| Pan troglodytes BAC clone RP43-141N5 from chromosome 7, complete
             sequence
          Length = 179309

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 33466 ttgctataattgatttggggaag 33488

>gb|AC104548.6| Mus musculus chromosome 5, clone RP24-83N12, complete sequence
          Length = 214247

 Score = 38.2 bits (19), Expect = 1.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    ttgctataattgatttagggaag 38
             |||||||||||||||| ||||||
Sbjct: 55672 ttgctataattgatttggggaag 55694

>gb|U41277.1| Caenorhabditis elegans cosmid C06E4, complete sequence
          Length = 31201

 Score = 36.2 bits (18), Expect = 4.0
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 15   gttgctataattgattta 32
            ||||||||||||||||||
Sbjct: 3171 gttgctataattgattta 3188

>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence
          Length = 108159

 Score = 36.2 bits (18), Expect = 4.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 20    tataattgatttagggaa 37
             ||||||||||||||||||
Sbjct: 69374 tataattgatttagggaa 69357

>emb|BX005397.20| Zebrafish DNA sequence from clone CH211-270B18 in linkage group 21,
             complete sequence
          Length = 157225

 Score = 36.2 bits (18), Expect = 4.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 15    gttgctataattgattta 32
             ||||||||||||||||||
Sbjct: 59281 gttgctataattgattta 59264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 224,784
Number of Sequences: 3902068
Number of extensions: 224784
Number of successful extensions: 59343
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59296
Number of HSP's gapped (non-prelim): 47
length of query: 38
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 18
effective length of database: 17,155,003,908
effective search space: 308790070344
effective search space used: 308790070344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)