| Clone Name | rbast08g12 |
|---|---|
| Clone Library Name | barley_pub |
>TNR6_MOUSE (P25446) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 327 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 139 PTTEGKEYSTPNNPA--IRRCILCSE 210 P TEGKEY N+ A RRC LC E Sbjct: 80 PCTEGKEYMDKNHYADKCRRCTLCDE 105
>TECTA_CHICK (Q9YH85) Alpha-tectorin precursor| Length = 2120 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 33 CTSRSTSRYCTIIQATIRSSTGLGTTHLWSKG 128 C++R T R C IQ T+R GLG W G Sbjct: 537 CSARRTHRLCQAIQVTLRCCQGLGIR--WENG 566
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 119 EQGLIMTLQQKGRNTVHLIIQPSGDAS 199 E+ + T +Q+G +T HLI PS D S Sbjct: 346 EEAALATPEQRGDDTEHLIFSPSDDMS 372
>CHEA_ENTAE (P21813) Chemotaxis protein cheA (EC 2.7.13.3) (Fragment)| Length = 226 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +2 Query: 80 YKV*HWAGHNTSLEQGLIMTLQQKGRNTVHLIIQPSG 190 Y+V AG T QG+++ LQ GR L+ Q G Sbjct: 138 YRVFECAGAKTEATQGIVVILQSAGRRNALLVDQLIG 174
>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)| (EC 3.1.3.-) Length = 849 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/58 (24%), Positives = 29/58 (50%) Frame = +2 Query: 11 SSKRTITVYQQIDQPLLHNHTGNYKV*HWAGHNTSLEQGLIMTLQQKGRNTVHLIIQP 184 SS R++ V+ ++ + L + + + +S L+M L +G++ HL+I P Sbjct: 369 SSNRSVLVFDELSEELEYKVSAKRSMKALYDKMSSNNTALVMPLFGQGKSVTHLLISP 426
>Y218_BARHE (Q6G4W4) UPF0090 protein BH02180| Length = 216 Score = 27.7 bits (60), Expect = 8.0 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 44 IDQPLLHNHTGNYKV*HWAGHNTSLEQGLIMTLQQKGRNTVHLIIQPSGDASSAPKALHG 223 ID+PL+ HW GH +E +I+ ++K R T+ I Q G + KA +G Sbjct: 107 IDRPLVRKSD----FFHWQGHIAKIETKIILEGRRKFRGTLTNITQ-DGFTLNTDKAAYG 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,744,768 Number of Sequences: 219361 Number of extensions: 880534 Number of successful extensions: 2224 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2224 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)