>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                          
Query: 228    gctgcagggcgcgagcgggcggccgcagaggcacttgttgggcgcgaagtgcctggggcc 287
              |||||| ||||  ||||||||| ||||||||||||||||    ||||||||| |||  ||
Sbjct: 128332 gctgcacggcggcagcgggcggtcgcagaggcacttgttcccggcgaagtgcttggcccc 128273

                                                                          
Query: 288    gaacctgtgcgtgtaccggccctgcggtatgggcccgcacagattgttgtagctcacgtc 347
              ||||| |||||||||||| ||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 128272 gaaccggtgcgtgtaccgcccctgcggtatgggcccgcacagctggttgtagctgacgtc 128213

                   
Query: 348    gaacg 352
              |||||
Sbjct: 128212 gaacg 128208

>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence,
            complete sequence
          Length = 35334

 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 228  gctgcagggcgcgagcgggcggccgcagaggcacttgttgggcgcgaagtgcctggggcc 287
            |||||| ||||  ||||||||| ||||||||||||||||    ||||||||| |||  ||
Sbjct: 7853 gctgcacggcggcagcgggcggtcgcagaggcacttgttcccggcgaagtgcttggcccc 7794

                                                                        
Query: 288  gaacctgtgcgtgtaccggccctgcggtatgggcccgcacagattgttgtagctcacgtc 347
            ||||| |||||||||||| ||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 7793 gaaccggtgcgtgtaccgcccctgcggtatgggcccgcacagctggttgtagctgacgtc 7734

                 
Query: 348  gaacg 352
            |||||
Sbjct: 7733 gaacg 7729

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                            
Query: 228      gctgcagggcgcgagcgggcggccgcagaggcacttgttgggcgcgaagtgcctggggcc 287
                |||||| ||||  ||||||||| ||||||||||||||||    ||||||||| |||  ||
Sbjct: 18223347 gctgcacggcggcagcgggcggtcgcagaggcacttgttcccggcgaagtgcttggcccc 18223288

                                                                            
Query: 288      gaacctgtgcgtgtaccggccctgcggtatgggcccgcacagattgttgtagctcacgtc 347
                ||||| |||||||||||| ||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 18223287 gaaccggtgcgtgtaccgcccctgcggtatgggcccgcacagctggttgtagctgacgtc 18223228

                     
Query: 348      gaacg 352
                |||||
Sbjct: 18223227 gaacg 18223223

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 2e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                            
Query: 228      gctgcagggcgcgagcgggcggccgcagaggcacttgttgggcgcgaagtgcctggggcc 287
                |||||| ||||  ||||||||| ||||||||||||||||    ||||||||| |||  ||
Sbjct: 18216888 gctgcacggcggcagcgggcggtcgcagaggcacttgttcccggcgaagtgcttggcccc 18216829

                                                                            
Query: 288      gaacctgtgcgtgtaccggccctgcggtatgggcccgcacagattgttgtagctcacgtc 347
                ||||| |||||||||||| ||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 18216828 gaaccggtgcgtgtaccgcccctgcggtatgggcccgcacagctggttgtagctgacgtc 18216769

                     
Query: 348      gaacg 352
                |||||
Sbjct: 18216768 gaacg 18216764

>gb|AY325118.1| Homo sapiens TAFA5 mRNA, complete cds
          Length = 2099

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 233 agggcgcgagcgggcggccgcagaggc 259
           ||||||||||||||||||||| |||||
Sbjct: 43  agggcgcgagcgggcggccgcggaggc 69

>ref|NM_015381.3| Homo sapiens family with sequence similarity 19 (chemokine (C-C
           motif)-like), member A5 (FAM19A5), mRNA
          Length = 2066

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 233 agggcgcgagcgggcggccgcagaggc 259
           ||||||||||||||||||||| |||||
Sbjct: 10  agggcgcgagcgggcggccgcggaggc 36

>emb|AL096853.13|HSFF96H12 Human DNA sequence from clone CITF22-96H12 on chromosome 22, complete
             sequence
          Length = 17027

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 233   agggcgcgagcgggcggccgcagaggc 259
             ||||||||||||||||||||| |||||
Sbjct: 12012 agggcgcgagcgggcggccgcggaggc 12038

>dbj|AK125256.1| Homo sapiens cDNA FLJ43266 fis, clone IMR322002110
          Length = 1526

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 233 agggcgcgagcgggcggccgcagaggc 259
           ||||||||||||||||||||| |||||
Sbjct: 69  agggcgcgagcgggcggccgcggaggc 95

>gb|AY672109.3| Bursa aurealis delivery vector pBursa, complete sequence
          Length = 7383

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 157 agcgaaagtagtagcaacagctat 180
           ||||||||||||||| ||||||||
Sbjct: 527 agcgaaagtagtagcgacagctat 550

>gb|AC110895.14| Mus musculus chromosome 1, clone RP24-159G18, complete sequence
          Length = 186137

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   gtagcaacagctatatatca 186
             ||||||||||||||||||||
Sbjct: 85469 gtagcaacagctatatatca 85450

>ref|XM_419597.1| PREDICTED: Gallus gallus similar to PHD finger protein 10 isoform
           a; PHD zinc finger protein XAP135 (LOC421556), mRNA
          Length = 1394

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 140 atgcagcagcagaacacagcgaaagtag 167
           ||||||||||||||||||  ||||||||
Sbjct: 462 atgcagcagcagaacacacagaaagtag 489

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     agctgatcgacgtggccagc 44
              ||||||||||||||||||||
Sbjct: 591687 agctgatcgacgtggccagc 591706

>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2
              Contains the 5' end of the BCAS4 gene for breast carcinoma
              amplified sequence 4, the PARD6B gene for par-6
              partitioning defective 6 homolog beta (C. elegans) and two
              CpG islands, complete sequence
          Length = 117431

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ctaactcgaagcctggagat 139
              ||||||||||||||||||||
Sbjct: 102759 ctaactcgaagcctggagat 102778

>emb|V01278.1|SAE194 S.aureus plasmid pE194 ORF's A,B,C,D,E, and F
          Length = 3728

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 157 agcgaaagtagtagcaacagctat 180
           ||||||||||||||| ||||||||
Sbjct: 697 agcgaaagtagtagcgacagctat 720

>gb|AC158773.6| Mus musculus chromosome 1, clone RP23-324F10, complete sequence
          Length = 230988

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gtagcaacagctatatatca 186
             ||||||||||||||||||||
Sbjct: 11081 gtagcaacagctatatatca 11100

>emb|AJ810977.1| Cloning vector pUCTV2 tet gene, lacZ' gene (partial), bla gene and
            ORFD
          Length = 6779

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 157  agcgaaagtagtagcaacagctat 180
            ||||||||||||||| ||||||||
Sbjct: 5330 agcgaaagtagtagcgacagctat 5353

>gb|AY026417.1| Kluyvera cryocrescens putative aspartate amino transferase and
            extended-spectrum beta-lactamase genes, complete cds; and
            unknown gene
          Length = 6122

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 137  gatatgcagcagcagaacacagcg 160
            |||||||||||||||| |||||||
Sbjct: 3805 gatatgcagcagcagagcacagcg 3782

>gb|AF307748.1|AF307748 Tn10 delivery vector pHV1249 transposase, CAT, erythromycin
            resistance, and ampicillin resistance genes, complete cds
          Length = 9092

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  agcgaaagtagtagcaacagctat 180
            ||||||||||||||| ||||||||
Sbjct: 6806 agcgaaagtagtagcgacagctat 6783

>gb|AF307747.1|AF307747 Tn10 delivery vector pHV1248 transposase, CAT, erythromycin
            resistance, and ampicillin resistance genes, complete cds
          Length = 8424

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 157  agcgaaagtagtagcaacagctat 180
            ||||||||||||||| ||||||||
Sbjct: 3546 agcgaaagtagtagcgacagctat 3569

>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete
              sequence
          Length = 213347

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    atgcagcagcagaacacagc 159
              ||||||||||||||||||||
Sbjct: 159862 atgcagcagcagaacacagc 159843

>gb|L08862.1|SYNPE194V pE194 cloning vector
          Length = 3728

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 157 agcgaaagtagtagcaacagctat 180
           ||||||||||||||| ||||||||
Sbjct: 697 agcgaaagtagtagcgacagctat 720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,241,767
Number of Sequences: 3902068
Number of extensions: 2241767
Number of successful extensions: 32494
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32424
Number of HSP's gapped (non-prelim): 66
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)