>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  119 bits (60), Expect = 5e-24
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                            
Query: 226      tggcgaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcact 285
                ||||||||||||| || |||||||||||||||||||| ||||| ||||||||  ||||||
Sbjct: 25521673 tggcgaggaggcgggcgacgcccttggtccacatgtcatgctctctctggctgccgcact 25521732

                                        
Query: 286      cgaactcgatcacccggtgctccg 309
                ||||||||||||||||||||||||
Sbjct: 25521733 cgaactcgatcacccggtgctccg 25521756

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  119 bits (60), Expect = 5e-24
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                            
Query: 226      tggcgaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcact 285
                ||||||||||||| || |||||||||||||||||||| ||||| ||||||||  ||||||
Sbjct: 25449849 tggcgaggaggcgggcgacgcccttggtccacatgtcatgctctctctggctgccgcact 25449908

                                        
Query: 286      cgaactcgatcacccggtgctccg 309
                ||||||||||||||||||||||||
Sbjct: 25449909 cgaactcgatcacccggtgctccg 25449932

>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144084

 Score =  119 bits (60), Expect = 5e-24
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                         
Query: 226   tggcgaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcact 285
             ||||||||||||| || |||||||||||||||||||| ||||| ||||||||  ||||||
Sbjct: 91055 tggcgaggaggcgggcgacgcccttggtccacatgtcatgctctctctggctgccgcact 91114

                                     
Query: 286   cgaactcgatcacccggtgctccg 309
             ||||||||||||||||||||||||
Sbjct: 91115 cgaactcgatcacccggtgctccg 91138

>ref|XM_468981.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2131

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
            |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 1575 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 1516

                                
Query: 290  ctcgatcacccggtgctccg 309
             ||||| |||||||||||||
Sbjct: 1515 ttcgattacccggtgctccg 1496

>ref|XM_468982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2331

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
            |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 1676 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 1617

                                
Query: 290  ctcgatcacccggtgctccg 309
             ||||| |||||||||||||
Sbjct: 1616 ttcgattacccggtgctccg 1597

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 230      gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
                |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 24159511 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 24159570

                                    
Query: 290      ctcgatcacccggtgctccg 309
                 ||||| |||||||||||||
Sbjct: 24159571 ttcgattacccggtgctccg 24159590

>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
             sequence
          Length = 140980

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 230   gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
             |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 64321 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 64262

                                 
Query: 290   ctcgatcacccggtgctccg 309
              ||||| |||||||||||||
Sbjct: 64261 ttcgattacccggtgctccg 64242

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 230      gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
                |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 24076950 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 24077009

                                    
Query: 290      ctcgatcacccggtgctccg 309
                 ||||| |||||||||||||
Sbjct: 24077010 ttcgattacccggtgctccg 24077029

>dbj|AK121696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072G11, full
            insert sequence
          Length = 2333

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  gaggaggcgcgccacgcccttggtccacatgtcgtgctccctctggctcgcgcactcgaa 289
            |||||||||||||||||| || |||||||| || | |||||||||||| | |||||||||
Sbjct: 1677 gaggaggcgcgccacgcctttcgtccacatctcatactccctctggctggtgcactcgaa 1618

                                
Query: 290  ctcgatcacccggtgctccg 309
             ||||| |||||||||||||
Sbjct: 1617 ttcgattacccggtgctccg 1598

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 281      gcactcgaactcgatcacccggtgctc 307
                |||||||||||||||||||||||||||
Sbjct: 18672259 gcactcgaactcgatcacccggtgctc 18672285

>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1756_G07
          Length = 149457

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 281   gcactcgaactcgatcacccggtgctc 307
             |||||||||||||||||||||||||||
Sbjct: 99529 gcactcgaactcgatcacccggtgctc 99555

>gb|AC098857.3| Homo sapiens BAC clone RP11-115I12 from 2, complete sequence
          Length = 80506

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 99   agaaaacaatagcaagaactac 120
            ||||||||||||||||||||||
Sbjct: 3188 agaaaacaatagcaagaactac 3167

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 74976 aaagaaaacaatagcaagaac 74956

>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     aaagaaaacaatagcaagaac 117
              |||||||||||||||||||||
Sbjct: 115838 aaagaaaacaatagcaagaac 115818

>gb|AE006478.1| Streptococcus pyogenes M1 GAS, section 7 of 167 of the complete
            genome
          Length = 12028

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 97   aaagaaaacaatagcaagaac 117
            |||||||||||||||||||||
Sbjct: 7692 aaagaaaacaatagcaagaac 7672

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 76259 aaagaaaacaatagcaagaac 76239

>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 74762 aaagaaaacaatagcaagaac 74742

>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 75157 aaagaaaacaatagcaagaac 75137

>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 74786 aaagaaaacaatagcaagaac 74766

>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 74464 aaagaaaacaatagcaagaac 74444

>gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, complete sequence
          Length = 195979

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 94     aacaaagaaaacaatagcaag 114
              |||||||||||||||||||||
Sbjct: 148156 aacaaagaaaacaatagcaag 148176

>gb|AE009959.1| Streptococcus pyogenes strain MGAS8232, section 7 of 173 of the
            complete genome
          Length = 11570

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 97   aaagaaaacaatagcaagaac 117
            |||||||||||||||||||||
Sbjct: 4968 aaagaaaacaatagcaagaac 4948

>dbj|AK046779.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
           full-length enriched library, clone:B830004H01
           product:unclassifiable, full insert sequence
          Length = 3807

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 94  aacaaagaaaacaatagcaagaact 118
           |||||||||||||||| ||||||||
Sbjct: 387 aacaaagaaaacaataccaagaact 363

>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 75179 aaagaaaacaatagcaagaac 75159

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaagaaaacaatagcaagaac 117
             |||||||||||||||||||||
Sbjct: 69178 aaagaaaacaatagcaagaac 69158

>gb|AC104898.9| Mus musculus chromosome 8, clone RP23-300I4, complete sequence
          Length = 181370

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 94   aacaaagaaaacaatagcaag 114
            |||||||||||||||||||||
Sbjct: 7782 aacaaagaaaacaatagcaag 7802

>ref|XM_447837.1| Candida glabrata CBS138, CAGL0J03058g partial mRNA
          Length = 1731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ggctgcgccgcgctcgatga 182
           ||||||||||||||||||||
Sbjct: 675 ggctgcgccgcgctcgatga 656

>emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on chromosome 9p12-13.3
              Contains the 3' end of a novel gene (FLJ22611), a novel
              gene, the GRHPR gene for glyoxylate
              reductase/hydroxypyruvate reductase, a novel gene
              (KIAA0354), a novel pseuodgene and a CpG island, complete
              sequence
          Length = 192336

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     accagagaggagaagaaact 74
              ||||||||||||||||||||
Sbjct: 161924 accagagaggagaagaaact 161943

>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    ggctgcgccgcgctcgatga 182
              ||||||||||||||||||||
Sbjct: 290987 ggctgcgccgcgctcgatga 291006

>gb|AC083809.21| Homo sapiens 12 BAC RP11-785D18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 136607

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    gaagaaactaaaacttacag 85
             ||||||||||||||||||||
Sbjct: 31213 gaagaaactaaaacttacag 31194

>emb|BX649304.3| Mouse DNA sequence from clone RP23-273K8 on chromosome 2, complete
           sequence
          Length = 48877

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aacaaagaaaacaatagcaagaac 117
           ||||||||||||||||| ||||||
Sbjct: 375 aacaaagaaaacaatagaaagaac 398

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     cgccgcgctcgatgacacgg 187
               ||||||||||||||||||||
Sbjct: 1622195 cgccgcgctcgatgacacgg 1622214

>emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in linkage group 20,
             complete sequence
          Length = 246647

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agaaaacaatagcaagaact 118
             ||||||||||||||||||||
Sbjct: 39793 agaaaacaatagcaagaact 39774

>emb|AJ316007.1|PAN316007 Podospora anserina mtHMG1 gene for putative mitochondrial HMG-like
           protein and partial ORF2
          Length = 4538

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 cggcggcggcgatcacgcga 204
           ||||||||||||||||||||
Sbjct: 402 cggcggcggcgatcacgcga 421

>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12
          Length = 260050

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 176    tcgatgacacggcggcggcgatca 199
              |||| |||||||||||||||||||
Sbjct: 129541 tcgaggacacggcggcggcgatca 129518

>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
              sequence
          Length = 181014

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 94     aacaaagaaaacaatagcaagaac 117
              ||||||||||||||||| ||||||
Sbjct: 179389 aacaaagaaaacaatagaaagaac 179412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,262,623
Number of Sequences: 3902068
Number of extensions: 3262623
Number of successful extensions: 69503
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69231
Number of HSP's gapped (non-prelim): 272
length of query: 309
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 287
effective length of database: 17,147,199,772
effective search space: 4921246334564
effective search space used: 4921246334564
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)