>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence
          Length = 183638

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    acaagtggaagtgttgactcc 82
             |||||||||||||||||||||
Sbjct: 33021 acaagtggaagtgttgactcc 33041

>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8,
              complete sequence
          Length = 232595

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     gttgactccctcaaataatct 94
              |||||||||||||||||||||
Sbjct: 199009 gttgactccctcaaataatct 198989

>gb|AC091726.2| Gallus gallus clone WAG-126P17, complete sequence
          Length = 129285

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cctcaaataatctagaatacc 102
             |||||||||||||||||||||
Sbjct: 24765 cctcaaataatctagaatacc 24745

>emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in linkage group 4
             Contains three novel genes and six CpG islands, complete
             sequence
          Length = 168908

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    gttgactccctcaaataatct 94
             |||||||||||||||||||||
Sbjct: 34141 gttgactccctcaaataatct 34161

>ref|XM_690261.1| PREDICTED: Danio rerio similar to PYRIN-containing APAF1-like
           protein 7 (LOC566977), mRNA
          Length = 4578

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 74  gttgactccctcaaataatct 94
           |||||||||||||||||||||
Sbjct: 354 gttgactccctcaaataatct 334

>gb|AC161265.2| Mus musculus BAC clone RP23-271F18 from chromosome 9, complete
            sequence
          Length = 203839

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 62   acaagtggaagtgttgactcc 82
            |||||||||||||||||||||
Sbjct: 7629 acaagtggaagtgttgactcc 7609

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 86       aaataatctagaatacctctt 106
                |||||||||||||||||||||
Sbjct: 25560076 aaataatctagaatacctctt 25560096

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 86       aaataatctagaatacctctt 106
                |||||||||||||||||||||
Sbjct: 25488252 aaataatctagaatacctctt 25488272

>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     aaataatctagaatacctctt 106
              |||||||||||||||||||||
Sbjct: 129458 aaataatctagaatacctctt 129478

>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     aaataatctagaatacctctt 106
              |||||||||||||||||||||
Sbjct: 113642 aaataatctagaatacctctt 113622

>gb|AC009127.10| Homo sapiens chromosome 16 clone RP11-498D10, complete sequence
          Length = 173128

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    cttacaagacaagtggaagtgttg 77
             |||||||| |||||||||||||||
Sbjct: 54466 cttacaagccaagtggaagtgttg 54443

>gb|AC004899.1| Homo sapiens PAC clone RP4-815D20 from 7, complete sequence
          Length = 91125

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   agtttatcttggaacaagat 129
             ||||||||||||||||||||
Sbjct: 40023 agtttatcttggaacaagat 40042

>emb|Y11784.1|RPFTSY R.prowazekii ftsY, polA, metK genes
          Length = 5864

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    caaaatctagatcaacatta 24
            ||||||||||||||||||||
Sbjct: 2230 caaaatctagatcaacatta 2211

>emb|AJ238756.1|RPR238756 Rickettsia prowazekii (strain B) ftsY (partial), polA, metK and dnaE
            (partial) genes
          Length = 6040

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    caaaatctagatcaacatta 24
            ||||||||||||||||||||
Sbjct: 1321 caaaatctagatcaacatta 1302

>emb|AJ238755.1|RPR238755 Rickettsia prowazekii (strain Madrid E) ftsY (partial), polA and dnaE
            (partial) genes and metK pseudogene
          Length = 6040

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    caaaatctagatcaacatta 24
            ||||||||||||||||||||
Sbjct: 1321 caaaatctagatcaacatta 1302

>emb|AJ235273.1|RPXX04 Rickettsia prowazekii strain Madrid E, complete genome; segment 4/4
          Length = 237523

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     caaaatctagatcaacatta 24
             ||||||||||||||||||||
Sbjct: 93939 caaaatctagatcaacatta 93920

>gb|DQ023264.1| Pongo pygmaeus HSD17B1P pseudogene, complete sequence; and
             17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene,
             complete cds
          Length = 44479

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   agtttatcttggaacaagat 129
             ||||||||||||||||||||
Sbjct: 37812 agtttatcttggaacaagat 37793

>gb|AC096727.3| Homo sapiens BAC clone RP11-35D5 from 4, complete sequence
          Length = 157078

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     tctagaatacctcttataagttta 115
              ||||||||| ||||||||||||||
Sbjct: 147915 tctagaataactcttataagttta 147938

>gb|AC009087.4|AC009087 Homo sapiens chromosome 16 clone RP11-384M15, complete sequence
          Length = 174933

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     cttacaagacaagtggaagtgttg 77
              |||||||| |||||||||||||||
Sbjct: 159456 cttacaagccaagtggaagtgttg 159433

>emb|Z82295.1|RPZ82295 R.prowazekii genomic DNA fragment (clone A153F)
          Length = 1207

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    caaaatctagatcaacatta 24
            ||||||||||||||||||||
Sbjct: 1025 caaaatctagatcaacatta 1006

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     atctagaatacctcttataa 110
              ||||||||||||||||||||
Sbjct: 206448 atctagaatacctcttataa 206429

>gb|AC137067.33| Mus musculus strain C57BL/6J clone rp23-288i20, complete sequence
          Length = 207232

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    tgttgactccctcaaataa 91
             |||||||||||||||||||
Sbjct: 66209 tgttgactccctcaaataa 66227

>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete sequence
          Length = 197488

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    tttatcttggaacaagatg 130
              |||||||||||||||||||
Sbjct: 123765 tttatcttggaacaagatg 123783

>gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome 8, complete sequence
          Length = 156593

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    aagacaagtggaagtgttg 77
             |||||||||||||||||||
Sbjct: 65890 aagacaagtggaagtgttg 65908

>gb|AC006024.1| Homo sapiens PAC clone RP5-1166G19 from 7, complete sequence
          Length = 90583

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   gtttatcttggaacaagat 129
             |||||||||||||||||||
Sbjct: 82109 gtttatcttggaacaagat 82091

>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence
          Length = 230139

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 59     aagacaagtggaagtgttg 77
              |||||||||||||||||||
Sbjct: 172528 aagacaagtggaagtgttg 172546

>emb|AL365510.32| Human DNA sequence from clone RP11-429H9 on chromosome 10 Contains the 
             3' end of a variant of a novel gene (FLJ33990), a
             phosphatidylinositol-4-phosphate 5-kinase, type I alpha
             (PIP5K1A) pseudogene, the proteasome (prosome macropain)
             26S subunit non-ATPase 4 pseudogene 2 (PSMD4P2), the 5'
             end of the PLCE1 gene for phospholipase C, epsilon 1
             (PLCE, KIAA1516), the 3' end of a novel transcript and two
             CpG islands, complete sequence
          Length = 180189

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     aaatctagatcaacattatgtat 29
             |||||||||||| ||||||||||
Sbjct: 12139 aaatctagatcatcattatgtat 12161

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 80      tccctcaaataatctagaatacc 102
               |||||||||||||||| ||||||
Sbjct: 1605066 tccctcaaataatctaaaatacc 1605088

>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    aagtggaagtgttgactcc 82
             |||||||||||||||||||
Sbjct: 80234 aagtggaagtgttgactcc 80216

>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete
              sequence
          Length = 154065

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 108    taagtttatcttggaacaa 126
              |||||||||||||||||||
Sbjct: 108208 taagtttatcttggaacaa 108226



 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   gtttatcttggaacaagat 129
             |||||||||||||||||||
Sbjct: 60019 gtttatcttggaacaagat 60001

>gb|AC158334.1| Homo sapiens chromosome 7 clone WI2-3678I11, complete sequence
          Length = 30477

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 111  gtttatcttggaacaagat 129
            |||||||||||||||||||
Sbjct: 9215 gtttatcttggaacaagat 9233

>gb|AC153546.10| Mus musculus 10 BAC RP23-356P21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207122

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     caaataatctagaatacct 103
              |||||||||||||||||||
Sbjct: 106323 caaataatctagaatacct 106341

>gb|AC009142.13| Homo sapiens chromosome 16 clone RP11-543N12, complete sequence
          Length = 195848

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     tgcaaaatctagatcaaca 21
             |||||||||||||||||||
Sbjct: 80914 tgcaaaatctagatcaaca 80932

>gb|AC121944.4| Mus musculus BAC clone RP24-211H19 from chromosome 1, complete sequence
          Length = 154484

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   tttatcttggaacaagatg 130
             |||||||||||||||||||
Sbjct: 30089 tttatcttggaacaagatg 30107

>gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosome 1, complete sequence
          Length = 202877

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   tttatcttggaacaagatg 130
             |||||||||||||||||||
Sbjct: 66758 tttatcttggaacaagatg 66776

>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 61      gacaagtggaagtgttgac 79
               |||||||||||||||||||
Sbjct: 3895412 gacaagtggaagtgttgac 3895394

>emb|AL627125.8| Mouse DNA sequence from clone RP23-466N19 on chromosome 4, complete
              sequence
          Length = 179068

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     aattcaggcacattaaact 55
              |||||||||||||||||||
Sbjct: 155700 aattcaggcacattaaact 155718

>emb|AL133368.6|CNS01DUT Human chromosome 14 DNA sequence BAC R-436M15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163272

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aaaatctagatcaacatta 24
             |||||||||||||||||||
Sbjct: 66762 aaaatctagatcaacatta 66780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,095,743
Number of Sequences: 3902068
Number of extensions: 1095743
Number of successful extensions: 78071
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77920
Number of HSP's gapped (non-prelim): 151
length of query: 136
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 115
effective length of database: 17,151,101,840
effective search space: 1972376711600
effective search space used: 1972376711600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)