| Clone Name | rbast08a04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disinteg... | 29 | 3.6 | 2 | VIT6_CAEEL (P18948) Vitellogenin 6 precursor | 28 | 8.0 |
|---|
>ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 19) (Meltrin beta) Length = 920 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 128 PRSWQRAQRRESHQRPLSS**MADASNLT*MCLKSWSVHRPSPP 259 P + R +R+ES +RP S M A N CL S RP PP Sbjct: 821 PEAGARIERKESARRPPPSRPMPPAPN----CLLSQDFSRPRPP 860
>VIT6_CAEEL (P18948) Vitellogenin 6 precursor| Length = 1650 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +2 Query: 77 NGKYTRNGRQTVSRYLEP--RSWQRAQRRESHQRPLS 181 NGK + +Q S Y P SW R Q RE + PL+ Sbjct: 1580 NGKSQESKKQKTSVYCLPSSNSWARRQMREIRREPLA 1616 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,032,134 Number of Sequences: 219361 Number of extensions: 689336 Number of successful extensions: 1154 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1154 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)