ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast07h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPT2B_BOVIN (Q27960) Sodium-dependent phosphate transport protei... 33 0.20
2NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protei... 30 1.7
3NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protei... 30 1.7
4T2R38_HYLKL (Q697L2) Taste receptor type 2 member 38 (T2R38) 28 4.9
5NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein ... 28 4.9
6VE5_HPV70 (P50774) Probable protein E5 28 6.3
7K1219_MOUSE (Q8BQZ4) Protein KIAA1219 28 8.3

>NPT2B_BOVIN (Q27960) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 693

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -2

Query: 186 TVCSCKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTRVV--FME*KDRRICSPK 13
           ++ SC      C C++ C   C  C CSK        CC CT+      E KD  + SP+
Sbjct: 608 SLTSCFQMRCCCCCRVCCRLCCGLCGCSK--------CCRCTKCSEDLEEGKDEPVKSPE 659



to top

>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 690

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 174 CKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58
           C      C C++ C   CL C C K        CC C++
Sbjct: 613 CFQMRCCCCCRVCCRACCLLCGCPK--------CCRCSK 643



to top

>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 689

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 174 CKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58
           C      C C++ C   CL C C K        CC C++
Sbjct: 612 CFQMRCCCCCRVCCRACCLLCGCPK--------CCRCSK 642



to top

>T2R38_HYLKL (Q697L2) Taste receptor type 2 member 38 (T2R38)|
          Length = 333

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 183 VCSCKTQLALCSCKLVCVDVCLWCACSK 100
           +C     + LCSC  +C  +C+WC  S+
Sbjct: 140 ICQMLLGIILCSC--ICTVLCVWCYFSR 165



to top

>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34 me
          Length = 695

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -2

Query: 177 SCKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58
           SC  +   C C++ C   C+ C C          CC C++
Sbjct: 612 SCFQRRCCCCCRVCCRVCCMVCGCK---------CCRCSK 642



to top

>VE5_HPV70 (P50774) Probable protein E5|
          Length = 78

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 141 LVCVDVCLWCACSKDLLVSVRLCCLCTRVVFM 46
           LV   VCL+  CS  LL SV LC     ++F+
Sbjct: 14  LVWFAVCLYICCSVPLLPSVHLCAYMWLLLFV 45



to top

>K1219_MOUSE (Q8BQZ4) Protein KIAA1219|
          Length = 1484

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 44  SINTTRVHRQHSRTLTSRSFEQAHHKHTSTHTSLQEHRAS 163
           ++NTT  H +  R +T           T+ HTS  +H+AS
Sbjct: 375 AVNTTPPHNRRHRAVTVNKATMKTSTVTTAHTSKVQHQAS 414


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,850,834
Number of Sequences: 219361
Number of extensions: 626505
Number of successful extensions: 1617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top