| Clone Name | rbast07h12 |
|---|---|
| Clone Library Name | barley_pub |
>NPT2B_BOVIN (Q27960) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 693 Score = 33.1 bits (74), Expect = 0.20 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -2 Query: 186 TVCSCKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTRVV--FME*KDRRICSPK 13 ++ SC C C++ C C C CSK CC CT+ E KD + SP+ Sbjct: 608 SLTSCFQMRCCCCCRVCCRLCCGLCGCSK--------CCRCTKCSEDLEEGKDEPVKSPE 659
>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 690 Score = 30.0 bits (66), Expect = 1.7 Identities = 12/39 (30%), Positives = 16/39 (41%) Frame = -2 Query: 174 CKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58 C C C++ C CL C C K CC C++ Sbjct: 613 CFQMRCCCCCRVCCRACCLLCGCPK--------CCRCSK 643
>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 689 Score = 30.0 bits (66), Expect = 1.7 Identities = 12/39 (30%), Positives = 16/39 (41%) Frame = -2 Query: 174 CKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58 C C C++ C CL C C K CC C++ Sbjct: 612 CFQMRCCCCCRVCCRACCLLCGCPK--------CCRCSK 642
>T2R38_HYLKL (Q697L2) Taste receptor type 2 member 38 (T2R38)| Length = 333 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 183 VCSCKTQLALCSCKLVCVDVCLWCACSK 100 +C + LCSC +C +C+WC S+ Sbjct: 140 ICQMLLGIILCSC--ICTVLCVWCYFSR 165
>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 me Length = 695 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/40 (27%), Positives = 17/40 (42%) Frame = -2 Query: 177 SCKTQLALCSCKLVCVDVCLWCACSKDLLVSVRLCCLCTR 58 SC + C C++ C C+ C C CC C++ Sbjct: 612 SCFQRRCCCCCRVCCRVCCMVCGCK---------CCRCSK 642
>VE5_HPV70 (P50774) Probable protein E5| Length = 78 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 Query: 141 LVCVDVCLWCACSKDLLVSVRLCCLCTRVVFM 46 LV VCL+ CS LL SV LC ++F+ Sbjct: 14 LVWFAVCLYICCSVPLLPSVHLCAYMWLLLFV 45
>K1219_MOUSE (Q8BQZ4) Protein KIAA1219| Length = 1484 Score = 27.7 bits (60), Expect = 8.3 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 Query: 44 SINTTRVHRQHSRTLTSRSFEQAHHKHTSTHTSLQEHRAS 163 ++NTT H + R +T T+ HTS +H+AS Sbjct: 375 AVNTTPPHNRRHRAVTVNKATMKTSTVTTAHTSKVQHQAS 414 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,850,834 Number of Sequences: 219361 Number of extensions: 626505 Number of successful extensions: 1617 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1571 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1612 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)