| Clone Name | rbast07g07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR854911.13| Zebrafish DNA sequence from clone DKEY-46O18 in linkage group 9, complete sequence Length = 233574 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tagaccacccgctccagtcca 170 ||||||||||||||||||||| Sbjct: 56640 tagaccacccgctccagtcca 56660
>emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in linkage group 9, complete sequence Length = 210830 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tagaccacccgctccagtcca 170 ||||||||||||||||||||| Sbjct: 7210 tagaccacccgctccagtcca 7190
>emb|CR388201.6| Zebrafish DNA sequence from clone DKEYP-66G8 in linkage group 19, complete sequence Length = 67447 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tagaccacccgctccagtcca 170 ||||||||||||||||||||| Sbjct: 51561 tagaccacccgctccagtcca 51581
>gb|AY544045.1| Salmo salar clone Rsa463 microsatellite sequence Length = 406 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 agttaacacccacattactc 107 |||||||||||||||||||| Sbjct: 298 agttaacacccacattactc 279
>emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chromosome 13, complete sequence Length = 228266 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaataagcaatctctcttag 89 |||||||||||||||||||| Sbjct: 201139 aaataagcaatctctcttag 201120
>emb|AL645501.8| Human DNA sequence from clone RP11-141J3 on chromosome 1, complete sequence Length = 43075 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gggagcagcaaacagaaaat 73 |||||||||||||||||||| Sbjct: 12456 gggagcagcaaacagaaaat 12475
>emb|AL591304.1| Human DNA sequence from clone RP11-21G12 on chromosome 6, complete sequence Length = 35013 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gaccaataacaaattaagca 208 |||||||||||||||||||| Sbjct: 22767 gaccaataacaaattaagca 22748
>gb|AC116641.3| Homo sapiens BAC clone RP11-589D21 from 4, complete sequence Length = 15827 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aacagaaaataagcaatctc 83 |||||||||||||||||||| Sbjct: 4749 aacagaaaataagcaatctc 4730
>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183562 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gaccaataacaaattaagca 208 |||||||||||||||||||| Sbjct: 148878 gaccaataacaaattaagca 148897
>gb|AC175538.1| Mus musculus BAC clone RP24-476A4 from chromosome 13, complete sequence Length = 191199 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaataagcaatctctcttag 89 |||||||||||||||||||| Sbjct: 81143 aaataagcaatctctcttag 81124 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,826,761 Number of Sequences: 3902068 Number of extensions: 1826761 Number of successful extensions: 31894 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31881 Number of HSP's gapped (non-prelim): 13 length of query: 283 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 261 effective length of database: 17,147,199,772 effective search space: 4475419140492 effective search space used: 4475419140492 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)