>TRFE_PAROL (O93429) Serotransferrin precursor|
          Length = 685

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 12  LICSLQPNDSVRDIIT**IKINLSRRRHHKAVVAQKQRVHTMMATFLKQQSSLFGNS 182
           LIC  +   SV + ++     NL++   H  V   +  + T + TFL  Q S FGNS
Sbjct: 564 LICPSKGPVSVENFMS----CNLAKVNAHAVVT--RPEIRTKVVTFLNNQQSHFGNS 614

>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)|
           (Repressor-activator protein 1)
          Length = 527

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 44  PRHHHMIDKNQSVQTQAPQSCSGTEAKSTHN 136
           P HHH++ + Q  Q Q  Q     + +  HN
Sbjct: 325 PHHHHLLQQEQQQQQQQQQQQQQQQQQQQHN 355

>POLG_BOVEV (P12915) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2174

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 35   RFCPRHHHMIDKNQSVQTQAPQSCSGTEAKSTHNDGNLSKTTV*SFWK 178
            + C  HH  +DK+  V    P  CSGT   ++  +  + +T V + +K
Sbjct: 1980 QLCCSHHLYMDKHYYVVGGMPSGCSGTSIFNSMINNLIIRTLVLTVYK 2027


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,324,813
Number of Sequences: 219361
Number of extensions: 600074
Number of successful extensions: 1650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)