ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast07c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin 182 3e-43
2ref|XM_479678.1| Oryza sativa (japonica cultivar-group), mRNA 101 1e-18
3ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group... 101 1e-18
4ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group... 101 1e-18
5ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group... 101 1e-18
6gb|AY072818.1| Oryza sativa anti-disease protein 1 (ADI1) mRNA, ... 101 1e-18
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
8dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
9dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
10dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
11dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
12dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
13dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
14dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA... 101 1e-18
15gb|AY103722.1| Zea mays PCO142214 mRNA sequence 98 2e-17
16gb|M73830.1|MZEFD1P Maize ferredoxin I (Fd) isoprotein mRNA, pFD1' 98 2e-17
17gb|M73829.1|MZEFD1 Maize ferredoxin I (Fd) isoprotein mRNA, pFD1 98 2e-17
18gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds 54 2e-04
19gb|M73828.1|MZEFD5 Maize ferredoxin (Fd) isoprotein mRNA, pFD5 52 8e-04
20dbj|AB016810.1| Zea mays mRNA for ferredoxin, complete cds 52 8e-04
21gb|AY189833.1| Helianthus annuus ferredoxin (FER1) mRNA, complet... 48 0.013
22gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredo... 48 0.013
23gb|AY108480.1| Zea mays PCO090770 mRNA sequence 46 0.051
24gb|AY552781.1| Nicotiana tabacum chloroplast ferredoxin I (fdn-1... 44 0.20
25gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, co... 44 0.20
26gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, com... 44 0.20
27gb|AF223573.1|AF223573 Nicotiana tabacum phospholipase C2 mRNA, ... 44 0.20
28gb|AY107646.1| Zea mays PCO072676 mRNA sequence 44 0.20
29gb|AY864890.1| Nicotiana tabacum chloroplast ferredoxin I (fdn-1... 44 0.20
30gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, compl... 44 0.20
31gb|AF003125.1|AF003125 Mesembryanthemum crystallinum ferredoxin ... 44 0.20
32dbj|AB001386.1| Maize DNA for Fd VI, complete cds 44 0.20
33dbj|AB001385.1| Maize mRNA for Fd VI, complete cds 44 0.20
34gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, com... 42 0.79
35gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.79
36gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.79
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
40gb|AC064878.9|AC064878 Homo sapiens chromosome 6 clone RP11-13I1... 42 0.79
41dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
42dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
43dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
44dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.79
45dbj|AK119310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.79
46dbj|AK100878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.79
47dbj|AK069860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.79
48emb|AL954814.17| Zebrafish DNA sequence from clone DKEY-79I1 in ... 42 0.79
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.79
50gb|L31356.1|PIGS0352MR Pig microsatellite (S0352) 42 0.79
51gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, com... 40 3.1
52gb|BT016313.1| Zea mays clone Contig146 mRNA sequence 40 3.1
53gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
54gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, compl... 40 3.1
55gb|DQ185423.1| Rosa roxburghii clone C5 defense-related mRNA, pa... 40 3.1
56gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.1
57gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 40 3.1
58gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosom... 40 3.1
59gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosom... 40 3.1
60gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119... 40 3.1
61gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosom... 40 3.1
62emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in ... 40 3.1
63gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosom... 40 3.1
64emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in... 40 3.1
65emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chro... 40 3.1
66emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chr... 40 3.1
67emb|AL683802.5| Mouse DNA sequence from clone RP23-247G3 on chro... 40 3.1
68emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in... 40 3.1
69dbj|AB192510.1| Sus scrofa genomic DNA, chromosome 7, BAC clone:... 40 3.1
70gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
71gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 gen... 40 3.1
72gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosom... 40 3.1
73dbj|AK048500.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 3.1
74gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cance... 40 3.1
75gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7,... 40 3.1
76dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
77dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
78gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 40 3.1
79gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome... 40 3.1
80gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 3.1
81gb|AC149590.5| Mus musculus BAC clone RP23-348L9 from chromosome... 40 3.1
82dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
83emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chr... 40 3.1
84dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
85gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, comple... 40 3.1
86gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, comp... 40 3.1
87gb|AY104148.1| Zea mays PCO088579 mRNA sequence 40 3.1
88emb|CR384055.4| Zebrafish DNA sequence from clone CH211-236C15 i... 40 3.1
89gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
90emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chr... 40 3.1
91gb|AC171896.2| Capitella capitata clone JGIBGZA-33J12, complete ... 40 3.1
92gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, comple... 40 3.1
93gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, comple... 40 3.1
94emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on ch... 40 3.1
95emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chr... 40 3.1
96emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chro... 40 3.1
97emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chr... 40 3.1
98emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chr... 40 3.1
99gb|M73831.1|MZEFD3 Maize ferredoxin III (Fd) isoprotein mRNA, pFD3 40 3.1
100gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 3.1
101dbj|AB001387.1| Maize DNA for Fd III, complete cds 40 3.1 
>emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin
          Length = 2244

 Score =  182 bits (92), Expect = 3e-43
 Identities = 107/112 (95%)
 Strand = Plus / Minus

                                                                        
Query: 132  ttgcaaagagaggcagggtaagcagcttatgcggtgagctcctcctccttgtgggtctcg 191
            ||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1989 ttgcaaagagagataggtaaagcagcttatgcggtgagctcctcctccttgtgggtctcg 1930

                                                                
Query: 192  atgacgatgtcggacttggggtaggcgtggcaggtgaccacccaccctgcct 243
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1929 atgacgatgtcggacttggggtaggcgtggcaggtgagcacccaccctgcct 1878



 Score =  141 bits (71), Expect = 1e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                        
Query: 5    cgaagacattattactggagcaaaccatgcatcgagcaattcattcgagcacaaacaaat 64
            |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2128 cgaagacattattacttgagcaaaccatgcatcgagcaattcattcgagcacaaacaatt 2069

                                           
Query: 65   cggtgtatctggcgatatccatgcatgcatg 95
            ||||||||||||| || ||| ||||||||||
Sbjct: 2068 cggtgtatctggcaatgtccgtgcatgcatg 2038
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>ref|XM_479678.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 736

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 489 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 435
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>ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 737

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 436
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>ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 737

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 436
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>ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 848

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 437
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>gb|AY072818.1| Oryza sativa anti-disease protein 1 (ADI1) mRNA, complete cds
          Length = 729

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 466 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 412
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                     
Query: 174    tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
              ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 235792 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 235846



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      tatccatgcatgcatgcatg 99
               ||||||||||||||||||||
Sbjct: 7747977 tatccatgcatgcatgcatg 7747996
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1300_E01
          Length = 103022

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                   
Query: 174  tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2218 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 2272
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>dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A06, full
           insert sequence
          Length = 848

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 437
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>dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E09, full
           insert sequence
          Length = 736

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 489 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 435
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>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
           insert sequence
          Length = 1944

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 491 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 437
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>dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D12, full
           insert sequence
          Length = 746

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 499 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 445
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>dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C09, full
           insert sequence
          Length = 737

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 490 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 436
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>dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA for ferredoxin,
           complete cds
          Length = 755

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 484 tcctccttgtgggtctcgatgacgacgtcggacttggggtaggcgtggcaggtga 430
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>gb|AY103722.1| Zea mays PCO142214 mRNA sequence
          Length = 938

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 163 cggtgagctcctcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggc 222
           |||||||||||||||||||||| ||||||||||||| ||| ||  |||||||||||||||
Sbjct: 692 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 633

                        
Query: 223 aggtgaccaccca 235
           |||||| ||||||
Sbjct: 632 aggtgagcaccca 620
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>gb|M73830.1|MZEFD1P Maize ferredoxin I (Fd) isoprotein mRNA, pFD1'
          Length = 757

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 163 cggtgagctcctcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggc 222
           |||||||||||||||||||||| ||||||||||||| ||| ||  |||||||||||||||
Sbjct: 533 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 474

                        
Query: 223 aggtgaccaccca 235
           |||||| ||||||
Sbjct: 473 aggtgagcaccca 461
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>gb|M73829.1|MZEFD1 Maize ferredoxin I (Fd) isoprotein mRNA, pFD1
          Length = 684

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 163 cggtgagctcctcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggc 222
           |||||||||||||||||||||| ||||||||||||| ||| ||  |||||||||||||||
Sbjct: 483 cggtgagctcctcctccttgtgcgtctcgatgacgacgtcagaggtggggtaggcgtggc 424

                        
Query: 223 aggtgaccaccca 235
           |||||| ||||||
Sbjct: 423 aggtgagcaccca 411
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>gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds
          Length = 849

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           |||||||||||||||||||| || |  || |||||||||| ||||||||| ||||
Sbjct: 484 tcctccttgtgggtctcgataacaacatccgacttggggttggcgtggcaagtga 430
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>gb|M73828.1|MZEFD5 Maize ferredoxin (Fd) isoprotein mRNA, pFD5
          Length = 616

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtgaccacc 233
           ||||||||||| ||||||||||||| ||||||  ||||||| ||   |||||||| ||||
Sbjct: 430 tcctccttgtgtgtctcgatgacgacgtcggaggtggggtacgcaacgcaggtgagcacc 371

             
Query: 234 ca 235
           ||
Sbjct: 370 ca 369
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>dbj|AB016810.1| Zea mays mRNA for ferredoxin, complete cds
          Length = 765

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtgaccacc 233
           ||||||||||| ||||||||||||| ||||||  ||||||| ||   |||||||| ||||
Sbjct: 469 tcctccttgtgcgtctcgatgacgacgtcggaggtggggtacgcagcgcaggtgagcacc 410

             
Query: 234 ca 235
           ||
Sbjct: 409 ca 408
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>gb|AY189833.1| Helianthus annuus ferredoxin (FER1) mRNA, complete cds
          Length = 571

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 170 ctcctcctccttgtgggtctcgat 193
           ||||||||||||||||||||||||
Sbjct: 433 ctcctcctccttgtgggtctcgat 410
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>gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial
           cds; nuclear gene for chloroplast product
          Length = 764

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 167 gagctcctcctccttgtgggtctcgatg 194
           |||||||||||||||||| |||||||||
Sbjct: 400 gagctcctcctccttgtgcgtctcgatg 373
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>gb|AY108480.1| Zea mays PCO090770 mRNA sequence
          Length = 737

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 174 tcctccttgtgggtctcgatgacgatgtcggacttggggtaggcgtggcaggtga 228
           ||||||||||| |||| |||||||| ||| ||  |||||||||||  ||||||||
Sbjct: 560 tcctccttgtgcgtctggatgacgaggtccgaggtggggtaggcgatgcaggtga 506
to top
>gb|AY552781.1| Nicotiana tabacum chloroplast ferredoxin I (fdn-1) gene, complete
           cds; nuclear gene for chloroplast product
          Length = 439

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 165 gtgagctcctcctccttgtgggtctc 190
           ||||||||||||||||| ||||||||
Sbjct: 430 gtgagctcctcctccttatgggtctc 405
to top
>gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, complete sequence
          Length = 141449

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 79    atatccatgcatgcatgcatga 100
             ||||||||||||||||||||||
Sbjct: 17917 atatccatgcatgcatgcatga 17896
to top
>gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, complete sequence
          Length = 145042

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    atatccatgcatgcatgcatga 100
             ||||||||||||||||||||||
Sbjct: 84955 atatccatgcatgcatgcatga 84976
to top
>gb|AF223573.1|AF223573 Nicotiana tabacum phospholipase C2 mRNA, complete cds
          Length = 2394

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 165  gtgagctcctcctccttgtgggtctc 190
            ||||||||||||||||| ||||||||
Sbjct: 2237 gtgagctcctcctccttatgggtctc 2212
to top
>gb|AY107646.1| Zea mays PCO072676 mRNA sequence
          Length = 941

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 171 tcctcctccttgtgggtctcgatgacgatgtcggacttggggtagg 216
           ||||||||||||||||| | |||||||  ||| | |||||||||||
Sbjct: 614 tcctcctccttgtgggtgtggatgacgcagtctgccttggggtagg 569
to top
>gb|AY864890.1| Nicotiana tabacum chloroplast ferredoxin I (fdn-1) mRNA, complete
           cds; nuclear gene for chloroplast product
          Length = 615

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 165 gtgagctcctcctccttgtgggtctc 190
           ||||||||||||||||| ||||||||
Sbjct: 452 gtgagctcctcctccttatgggtctc 427
to top
>gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, complete sequence
          Length = 140977

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     atatccatgcatgcatgcatga 100
              ||||||||||||||||||||||
Sbjct: 123057 atatccatgcatgcatgcatga 123078
to top
>gb|AF003125.1|AF003125 Mesembryanthemum crystallinum ferredoxin I precursor mRNA, complete
           cds
          Length = 656

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 165 gtgagctcctcctccttgtgggtctc 190
           ||||||||||| ||||||||||||||
Sbjct: 502 gtgagctcctcttccttgtgggtctc 477
to top
>dbj|AB001386.1| Maize DNA for Fd VI, complete cds
          Length = 2351

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 171  tcctcctccttgtgggtctcgatgacgatgtcggacttggggtagg 216
            ||||||||||||||||| | |||||||  ||| | |||||||||||
Sbjct: 2038 tcctcctccttgtgggtgtggatgacgcagtctgccttggggtagg 1993
to top
>dbj|AB001385.1| Maize mRNA for Fd VI, complete cds
          Length = 845

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 171 tcctcctccttgtgggtctcgatgacgatgtcggacttggggtagg 216
           ||||||||||||||||| | |||||||  ||| | |||||||||||
Sbjct: 612 tcctcctccttgtgggtgtggatgacgcagtctgccttggggtagg 567
to top
>gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, complete sequence
          Length = 175229

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     catgcatgcatgcatgatggg 104
              |||||||||||||||||||||
Sbjct: 101224 catgcatgcatgcatgatggg 101244
to top
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    tatccatgcatgcatgcatga 100
             |||||||||||||||||||||
Sbjct: 45828 tatccatgcatgcatgcatga 45808
to top
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    tatccatgcatgcatgcatga 100
             |||||||||||||||||||||
Sbjct: 45828 tatccatgcatgcatgcatga 45808
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       tatccatgcatgcatgcatga 100
                |||||||||||||||||||||
Sbjct: 21043513 tatccatgcatgcatgcatga 21043493
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 164     ggtgagctcctcctccttgtg 184
               |||||||||||||||||||||
Sbjct: 4036890 ggtgagctcctcctccttgtg 4036910



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       tatccatgcatgcatgcatg 99
                ||||||||||||||||||||
Sbjct: 19328033 tatccatgcatgcatgcatg 19328014
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 170      ctcctcctccttgtgggtctcgatgacgatgtcggacttggggta 214
                |||||| ||||||||||| | |||||||  ||| |||||||||||
Sbjct: 37235199 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggta 37235155
to top
>gb|AC064878.9|AC064878 Homo sapiens chromosome 6 clone RP11-13I13, complete sequence
          Length = 168654

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   agagaggcagggtaagcagct 158
             |||||||||||||||||||||
Sbjct: 93059 agagaggcagggtaagcagct 93079
to top
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489B03
          Length = 150381

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 170    ctcctcctccttgtgggtctcgatgacgatgtcggacttggggta 214
              |||||| ||||||||||| | |||||||  ||| |||||||||||
Sbjct: 109855 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggta 109811
to top
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0679C12
          Length = 153666

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 170   ctcctcctccttgtgggtctcgatgacgatgtcggacttggggta 214
             |||||| ||||||||||| | |||||||  ||| |||||||||||
Sbjct: 72188 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggta 72144
to top
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0019L07
          Length = 131650

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   ggtgagctcctcctccttgtg 184
             |||||||||||||||||||||
Sbjct: 80545 ggtgagctcctcctccttgtg 80565
to top
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0035I03
          Length = 153749

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    ggtgagctcctcctccttgtg 184
              |||||||||||||||||||||
Sbjct: 142766 ggtgagctcctcctccttgtg 142786
to top
>dbj|AK119310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G06, full
           insert sequence
          Length = 3419

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 170 ctcctcctccttgtgggtctcgatgacgatgtcggacttggggta 214
           |||||| ||||||||||| | |||||||  ||| |||||||||||
Sbjct: 396 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggta 440
to top
>dbj|AK100878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C21, full
            insert sequence
          Length = 3241

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  ggtgagctcctcctccttgtg 184
            |||||||||||||||||||||
Sbjct: 2821 ggtgagctcctcctccttgtg 2801
to top
>dbj|AK069860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H08, full
           insert sequence
          Length = 911

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 170 ctcctcctccttgtgggtctcgatgacgatgtcggacttggggta 214
           |||||| ||||||||||| | |||||||  ||| |||||||||||
Sbjct: 785 ctcctcttccttgtgggtgtagatgacgcagtccgacttggggta 741
to top
>emb|AL954814.17| Zebrafish DNA sequence from clone DKEY-79I1 in linkage group 14,
             complete sequence
          Length = 175477

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    atatccatgcatgcatgcatg 99
             |||||||||||||||||||||
Sbjct: 84102 atatccatgcatgcatgcatg 84122
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       tatccatgcatgcatgcatga 100
                |||||||||||||||||||||
Sbjct: 21353754 tatccatgcatgcatgcatga 21353734
to top
>gb|L31356.1|PIGS0352MR Pig microsatellite (S0352)
          Length = 530

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  gcatgatgggagataatatga 115
           |||||||||||||||||||||
Sbjct: 341 gcatgatgggagataatatga 321
to top
>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence
          Length = 181980

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 96719 tatccatgcatgcatgcatg 96738
to top
>gb|BT016313.1| Zea mays clone Contig146 mRNA sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 177 tccttgtgggtctcgatgacgatgtcggacttggggtagg 216
           ||||||||||| | |||||||  ||||||||| |||||||
Sbjct: 619 tccttgtgggtgtggatgacgcagtcggactttgggtagg 580
to top
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     catgcatgcatgcatgatgg 103
              ||||||||||||||||||||
Sbjct: 139643 catgcatgcatgcatgatgg 139624
to top
>gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, complete sequence
          Length = 179251

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 175193 tatccatgcatgcatgcatg 175174



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 175145 tatccatgcatgcatgcatg 175126
to top
>gb|DQ185423.1| Rosa roxburghii clone C5 defense-related mRNA, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 165 gtgagctcctcctccttgtgggtctcga 192
           ||||||||||| ||||||||||| ||||
Sbjct: 168 gtgagctcctcttccttgtgggtttcga 195
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ccatgcatgcatgcatgatg 102
                ||||||||||||||||||||
Sbjct: 31504118 ccatgcatgcatgcatgatg 31504099



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       catgcatgcatgcatgatgg 103
                ||||||||||||||||||||
Sbjct: 15910774 catgcatgcatgcatgatgg 15910793



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       tatccatgcatgcatgcatg 99
                ||||||||||||||||||||
Sbjct: 13291181 tatccatgcatgcatgcatg 13291200
to top
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ccatgcatgcatgcatgatg 102
             ||||||||||||||||||||
Sbjct: 88478 ccatgcatgcatgcatgatg 88497
to top
>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete
             sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 90155 tatccatgcatgcatgcatg 90174
to top
>gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosome 16, complete
             sequence
          Length = 147166

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    atatccatgcatgcatgcat 98
             ||||||||||||||||||||
Sbjct: 50869 atatccatgcatgcatgcat 50888
to top
>gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119A19, complete sequence
          Length = 197456

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 33271 tatccatgcatgcatgcatg 33290
to top
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence
          Length = 204940

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     atatccatgcatgcatgcat 98
              ||||||||||||||||||||
Sbjct: 191143 atatccatgcatgcatgcat 191162
to top
>emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in linkage group 5, complete
              sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 149974 tatccatgcatgcatgcatg 149993
to top
>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete
             sequence
          Length = 218059

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    atatccatgcatgcatgcat 98
             ||||||||||||||||||||
Sbjct: 25026 atatccatgcatgcatgcat 25045
to top
>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11,
             complete sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ccatgcatgcatgcatgatg 102
             ||||||||||||||||||||
Sbjct: 48689 ccatgcatgcatgcatgatg 48708
to top
>emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chromosome 11 Contains the
             5' end of a novel pseudogene (similar to hypothetical
             protein TR:Q8C517), 3 novel pseudogenes (similar to
             hypothetical protein TR:Q8C517) and the 5' end of the
             Col1a1 gene for pro-collagen type I alpha 1, complete
             sequence
          Length = 133405

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gatatccatgcatgcatgca 97
             ||||||||||||||||||||
Sbjct: 54804 gatatccatgcatgcatgca 54785
to top
>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     gatatccatgcatgcatgca 97
              ||||||||||||||||||||
Sbjct: 203190 gatatccatgcatgcatgca 203171
to top
>emb|AL683802.5| Mouse DNA sequence from clone RP23-247G3 on chromosome 11 Contains a
            novel pseudogene (similar to hypothetical protein
            TR:Q8C517) and the 3' end of a novel pseudogene (similar
            to hypothetical protein TR:Q8C517), complete sequence
          Length = 32978

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   gatatccatgcatgcatgca 97
            ||||||||||||||||||||
Sbjct: 1928 gatatccatgcatgcatgca 1909
to top
>emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in linkage group 5,
              complete sequence
          Length = 206722

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 184486 tatccatgcatgcatgcatg 184467
to top
>dbj|AB192510.1| Sus scrofa genomic DNA, chromosome 7, BAC clone: L111D05, complete
             sequence
          Length = 150159

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    catgatgggagataatatga 115
             ||||||||||||||||||||
Sbjct: 74118 catgatgggagataatatga 74137
to top
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
              complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 169521 tatccatgcatgcatgcatg 169540
to top
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
             sequence
          Length = 117157

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 67450 tatccatgcatgcatgcatg 67431
to top
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence
          Length = 202301

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    catgcatgcatgcatgatgg 103
             ||||||||||||||||||||
Sbjct: 36518 catgcatgcatgcatgatgg 36537
to top
>dbj|AK048500.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130066J20 product:interleukin 10
            receptor, beta, full insert sequence
          Length = 4506

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   atatccatgcatgcatgcat 98
            ||||||||||||||||||||
Sbjct: 3326 atatccatgcatgcatgcat 3345
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>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197909

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     catgcatgcatgcatgatgg 103
              ||||||||||||||||||||
Sbjct: 195137 catgcatgcatgcatgatgg 195118
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>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 77399 tatccatgcatgcatgcatg 77418



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 77169 tatccatgcatgcatgcatg 77188
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       tatccatgcatgcatgcatg 99
                ||||||||||||||||||||
Sbjct: 16290632 tatccatgcatgcatgcatg 16290651
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       ccatgcatgcatgcatgatg 102
                ||||||||||||||||||||
Sbjct: 31594634 ccatgcatgcatgcatgatg 31594615



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       catgcatgcatgcatgatgg 103
                ||||||||||||||||||||
Sbjct: 15905308 catgcatgcatgcatgatgg 15905327



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       tatccatgcatgcatgcatg 99
                ||||||||||||||||||||
Sbjct: 13287956 tatccatgcatgcatgcatg 13287975
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    catgcatgcatgcatgatgg 103
             ||||||||||||||||||||
Sbjct: 33162 catgcatgcatgcatgatgg 33181
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>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence
          Length = 229269

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     atccatgcatgcatgcatga 100
              ||||||||||||||||||||
Sbjct: 217426 atccatgcatgcatgcatga 217445
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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atccatgcatgcatgcatga 100
             ||||||||||||||||||||
Sbjct: 33420 atccatgcatgcatgcatga 33439
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>gb|AC149590.5| Mus musculus BAC clone RP23-348L9 from chromosome 5, complete sequence
          Length = 196662

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 124182 tatccatgcatgcatgcatg 124163
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>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 32806 tatccatgcatgcatgcatg 32787
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>emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chromosome 2, complete
              sequence
          Length = 222104

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 221045 tatccatgcatgcatgcatg 221026
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>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1221_H04
          Length = 129387

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 88700 tatccatgcatgcatgcatg 88719
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>gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, complete sequence
          Length = 153574

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 71095 tatccatgcatgcatgcatg 71114
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>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence
          Length = 225977

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 189753 tatccatgcatgcatgcatg 189772
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>gb|AY104148.1| Zea mays PCO088579 mRNA sequence
          Length = 1090

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 177 tccttgtgggtctcgatgacgatgtcggacttggggtagg 216
           ||||||||||| | |||||||  ||||||||| |||||||
Sbjct: 761 tccttgtgggtgtggatgacgcagtcggactttgggtagg 722
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>emb|CR384055.4| Zebrafish DNA sequence from clone CH211-236C15 in linkage group 25,
             complete sequence
          Length = 90680

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tcctcctccttgtgggtctc 190
             ||||||||||||||||||||
Sbjct: 51351 tcctcctccttgtgggtctc 51370
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       tatccatgcatgcatgcatg 99
                ||||||||||||||||||||
Sbjct: 16298874 tatccatgcatgcatgcatg 16298893
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>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the
             3' end of a novel gene, the gene for a novel protein
             similar to nascent polypeptide-associated complex alpha
             polypeptide Naca, the Tbrg4 gene for transforming growth
             factor beta regulated gene 4, the Wap gene for whey acidic
             protein, an ethanol induced 6 (Etohi6) pseudogene, two
             novel genes, the Ramp3 gene for receptor (calcitonin)
             activity modifying protein 3, a lactate dehydrogenase 1 A
             chain (Ldh1) pseudogene, a mitochondrial ribosomal protein
             L36 (Mrpl36) pseudogene, a retinoblastoma binding protein
             5 (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a)
             pseudogene and two CpG islands, complete sequence
          Length = 225879

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 67250 tatccatgcatgcatgcatg 67269
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>gb|AC171896.2| Capitella capitata clone JGIBGZA-33J12, complete sequence
          Length = 31338

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 25853 tatccatgcatgcatgcatg 25834
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>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence
          Length = 187465

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    catgcatgcatgcatgatgg 103
             ||||||||||||||||||||
Sbjct: 73987 catgcatgcatgcatgatgg 74006
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>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence
          Length = 188444

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     atatccatgcatgcatgcat 98
              ||||||||||||||||||||
Sbjct: 104441 atatccatgcatgcatgcat 104460
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>emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on chromosome 2, complete
             sequence
          Length = 209013

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 72638 tatccatgcatgcatgcatg 72619
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>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete
             sequence
          Length = 175570

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    atatccatgcatgcatgcat 98
             ||||||||||||||||||||
Sbjct: 30736 atatccatgcatgcatgcat 30755
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>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete
             sequence
          Length = 221903

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    atatccatgcatgcatgcat 98
             ||||||||||||||||||||
Sbjct: 30538 atatccatgcatgcatgcat 30557
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>emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chromosome 4, complete
              sequence
          Length = 201741

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tatccatgcatgcatgcatg 99
              ||||||||||||||||||||
Sbjct: 180309 tatccatgcatgcatgcatg 180328
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>emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chromosome 2, complete
             sequence
          Length = 209452

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 91110 tatccatgcatgcatgcatg 91129
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>gb|M73831.1|MZEFD3 Maize ferredoxin III (Fd) isoprotein mRNA, pFD3
          Length = 705

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 177 tccttgtgggtctcgatgacgatgtcggacttggggtagg 216
           ||||||||||| | |||||||  ||||||||| |||||||
Sbjct: 454 tccttgtgggtgtggatgacgcagtcggactttgggtagg 415
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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tatccatgcatgcatgcatg 99
             ||||||||||||||||||||
Sbjct: 28660 tatccatgcatgcatgcatg 28641
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>dbj|AB001387.1| Maize DNA for Fd III, complete cds
          Length = 5179

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 177  tccttgtgggtctcgatgacgatgtcggacttggggtagg 216
            ||||||||||| | |||||||  ||||||||| |||||||
Sbjct: 4628 tccttgtgggtgtggatgacgcagtcggactttgggtagg 4589


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,550,945
Number of Sequences: 3902068
Number of extensions: 2550945
Number of successful extensions: 67587
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66445
Number of HSP's gapped (non-prelim): 1138
length of query: 243
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 221
effective length of database: 17,147,199,772
effective search space: 3789531149612
effective search space used: 3789531149612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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