| Clone Name | rbast07c05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RRPL_PUUMH (P27176) RNA-directed RNA polymerase (EC 2.7.7.48) (L... | 28 | 5.2 | 2 | LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A ... | 28 | 6.8 |
|---|
>RRPL_PUUMH (P27176) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 2156 Score = 28.5 bits (62), Expect = 5.2 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +3 Query: 45 DRSTKWEHYIVQEMLAPHAHWH 110 D T+W Y+ Q++ A + HWH Sbjct: 1111 DDGTEWFQYVTQQIQAGNFHWH 1132
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3075 Score = 28.1 bits (61), Expect = 6.8 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +1 Query: 79 RKCLLPMPTGTCANYSTHSCHHTTARRPI 165 RK LL PTGTC++ HS RR I Sbjct: 2567 RKALLHAPTGTCSDGQAHSISLVRNRRII 2595 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,963,160 Number of Sequences: 219361 Number of extensions: 246579 Number of successful extensions: 549 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 544 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 549 length of database: 80,573,946 effective HSP length: 32 effective length of database: 73,554,394 effective search space used: 1765305456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)