| Clone Name | rbast06e07 |
|---|---|
| Clone Library Name | barley_pub |
>IF4E3_ARATH (Q9FK59) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) Length = 221 Score = 82.4 bits (202), Expect = 3e-16 Identities = 36/38 (94%), Positives = 37/38 (97%) Frame = -2 Query: 277 RDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNTWLRG 164 RDSIKRHLKLPH Y+MEYKPHDASLRDNSSYRNTWLRG Sbjct: 184 RDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221
>IF4E4_CAEEL (Q22888) Eukaryotic translation initiation factor 4E-4 (eIF4E-4)| (eIF-4E-4) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = -2 Query: 277 RDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNT 176 R++++ L+LP ++EYK HD LRD SSYR+T Sbjct: 173 RETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRHT 206
>IF4E3_MOUSE (Q8BMB3) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (eIF4E-like protein 4E-LP) Length = 245 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 277 RDSIKRHLKLPHTYLMEYKPHDASLR 200 RD+++R L LP +MEYK H S++ Sbjct: 197 RDTLRRVLNLPPNTIMEYKTHTDSIK 222
>IF4E3_HUMAN (O60573) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (Eukaryotic translation initiation factor 4E homologous protein) Length = 245 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 277 RDSIKRHLKLPHTYLMEYKPHDASLR 200 RD+++R L LP +MEYK H S++ Sbjct: 197 RDTLRRVLNLPPNTIMEYKTHTDSIK 222
>SPDYC_HUMAN (Q5MJ68) Speedy protein C (Rapid inducer of G2/M progression in| oocytes C) (RINGO C) (hSpy/Ringo C) Length = 293 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +2 Query: 32 FCRVHGSMTKSNHTS-WLG*NFRTENPQGLSSREGP*LALTTWRLTSQPCVPVGRVVSQR 208 F R H +++ H+S +L + + L EGP + W L C+ VG+ + QR Sbjct: 96 FQRAHLKLSEYTHSSLFLALYLANDMEEDL---EGPKCEIFPWALGKDWCLRVGKFLHQR 152 Query: 209 GIMW 220 +W Sbjct: 153 DKLW 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,804,963 Number of Sequences: 219361 Number of extensions: 664094 Number of successful extensions: 1378 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1357 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1378 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)