>Y36K_HALSN (P14321) Hypothetical 36 kDa protein|
          Length = 328

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +2

Query: 47  FVRCPRICFDTFS*QIDSHRRNTQTNCRLSNEPILRGRIGRDAPAVSVLRAARPDRPNGA 226
           FV+ P +  + F   +D+H +N++   R ++  ++      D  AVS+ R+ARPDR +G 
Sbjct: 170 FVKGPVVA-EQFQDVLDAHVKNSEGAGREAHRAVVED--DEDEAAVSIRRSARPDREDGI 226

Query: 227 GRPGA 241
              GA
Sbjct: 227 ENLGA 231

>HRCA_CHLPN (Q9Z850) Heat-inducible transcription repressor hrcA|
          Length = 398

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 98  SHRRNTQTNCRLSNEPILR 154
           S RR   +NC+LSNEPILR
Sbjct: 365 SFRRPLTSNCKLSNEPILR 383

>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 237 PGRPAPFGRSGRAARSTETAGASRPIRPRRMGSLLR 130
           PGRP P  R+  A R  + AG   P+RP R+  + R
Sbjct: 86  PGRPRPEPRN--APRVAQLAGLPAPLRPERLAPVGR 119

>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = -3

Query: 246 TPA----PGRPAPFGRSGRAARSTETAGASRPIRP 154
           TPA    P  PAP  R G+A RS   AG+  P  P
Sbjct: 62  TPAVVIPPPSPAPEPRGGKAKRSPSAAGSGGPPTP 96

>DPOL_ADE04 (P87503) DNA polymerase (EC 2.7.7.7)|
          Length = 1193

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -2

Query: 190 YGDGR---CVTPDTPAKNGLVAQAAICLRITPVAVDLLGKCIETNPRAADEICVFRRLSN 20
           +GD R   CVTP+  A      Q    L+ T +AVDL    +  NP  AD       LS+
Sbjct: 324 HGDPRTFYCVTPEKMAVGQQFRQYRDRLQ-TALAVDLWTSFLRANPHLADWALEQHGLSD 382

Query: 19  REPLVY 2
            + L Y
Sbjct: 383 PDELTY 388

>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
           immediate-early protein)
          Length = 1487

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 237 PGRPAPFGRSGRAARSTETAGASRPIRP 154
           P  PAP  R G+A RS   AG+  P  P
Sbjct: 69  PPSPAPEPRGGKAKRSPSAAGSGGPPTP 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,606,680
Number of Sequences: 219361
Number of extensions: 672480
Number of successful extensions: 2331
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2331
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)