>gb|AY496432.1| Apis mellifera defensin/royalisin precursor, gene, complete cds
          Length = 2012

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 32  aaaaagaaatttttgttacacaaat 56
           |||||||||||||||| ||||||||
Sbjct: 197 aaaaagaaatttttgtcacacaaat 221

>ref|XM_635214.1| Dictyostelium discoideum actin binding protein (DDB0231188), partial
            mRNA
          Length = 3645

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 30   agaaaaagaaatttttgttacacaa 54
            |||||||||||||||||||| ||||
Sbjct: 2577 agaaaaagaaatttttgttagacaa 2601

>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence
          Length = 159785

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    tttgttacacaaatcctccaa 63
             |||||||||||||||||||||
Sbjct: 43525 tttgttacacaaatcctccaa 43505

>gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete
              sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     tctatcacatgcatagtgtaa 97
              |||||||||||||||||||||
Sbjct: 208085 tctatcacatgcatagtgtaa 208105

>emb|AJ812734.1| Dictyostelium discoideum mRNA for diaphanous-related formin dDia4
            (drf4 gene)
          Length = 3645

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 30   agaaaaagaaatttttgttacacaa 54
            |||||||||||||||||||| ||||
Sbjct: 2577 agaaaaagaaatttttgttagacaa 2601

>gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complete sequence
          Length = 225065

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     aaaaagaaatttttgttaca 51
              ||||||||||||||||||||
Sbjct: 130874 aaaaagaaatttttgttaca 130893

>gb|AC134177.1| Drosophila pseudoobscura  FOSMID DPSF1-548A1 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 46224

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    cagaaaaagaaatttttgtt 48
             ||||||||||||||||||||
Sbjct: 28078 cagaaaaagaaatttttgtt 28059

>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence
          Length = 185755

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    agaaaaagaaatttttgtta 49
             ||||||||||||||||||||
Sbjct: 97890 agaaaaagaaatttttgtta 97871

>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence
          Length = 212589

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    aaaagaaatttttgttacacaaa 55
             ||||||||||||| |||||||||
Sbjct: 36764 aaaagaaatttttcttacacaaa 36786

>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6,
             complete sequence
          Length = 216472

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    ccctgggaaaaacggcctc 28
             |||||||||||||||||||
Sbjct: 13427 ccctgggaaaaacggcctc 13409

>emb|CR759903.8| Zebrafish DNA sequence from clone CH211-138E6 in linkage group 9,
             complete sequence
          Length = 168689

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 30    agaaaaagaaatttttgttacacaaat 56
             ||||||||||||||||| || ||||||
Sbjct: 77000 agaaaaagaaatttttggtagacaaat 77026

>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence
          Length = 159298

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ttttgttacacaaatcctc 60
             |||||||||||||||||||
Sbjct: 69168 ttttgttacacaaatcctc 69186

>emb|AL157762.13| Human DNA sequence from clone RP11-153I24 on chromosome 13q33.1-34
              Contains the LIG4 gene for ligase IV, DNA, ATP-dependent, a
              novel gene (FLJ14906), the TNFSF13B gene for tumor necrosis
              factor (ligand) superfamily, member 13b and a CpG island,
              complete sequence
          Length = 185229

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     ggcctccagaaaaagaaat 41
              |||||||||||||||||||
Sbjct: 163788 ggcctccagaaaaagaaat 163770

>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      aaaagaaatttttgttaca 51
               |||||||||||||||||||
Sbjct: 1366964 aaaagaaatttttgttaca 1366982

>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      aaaagaaatttttgttaca 51
               |||||||||||||||||||
Sbjct: 1354439 aaaagaaatttttgttaca 1354457

>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      aaaagaaatttttgttaca 51
               |||||||||||||||||||
Sbjct: 1388876 aaaagaaatttttgttaca 1388894

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 59      tccaacactccatgcaagt 77
               |||||||||||||||||||
Sbjct: 4735737 tccaacactccatgcaagt 4735755

>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3
          Length = 250050

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     agaaaaagaaatttttgtt 48
              |||||||||||||||||||
Sbjct: 182907 agaaaaagaaatttttgtt 182925

>emb|CR376846.9| Zebrafish DNA sequence from clone CH211-240P12 in linkage group 1,
             complete sequence
          Length = 145408

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    tctatcacatgcatagtgt 95
             |||||||||||||||||||
Sbjct: 79316 tctatcacatgcatagtgt 79334

>gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163591

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    aaaagaaatttttgttacacaaa 55
             |||||||||| ||||||||||||
Sbjct: 61420 aaaagaaattattgttacacaaa 61398

>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence
          Length = 167757

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    aaatttttgttacacaaat 56
             |||||||||||||||||||
Sbjct: 30783 aaatttttgttacacaaat 30801

>dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, complete sequences
          Length = 161601

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ttttgttacacaaatcctc 60
             |||||||||||||||||||
Sbjct: 22647 ttttgttacacaaatcctc 22665

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 42       ttttgttacacaaatcctc 60
                |||||||||||||||||||
Sbjct: 15485236 ttttgttacacaaatcctc 15485218

>emb|BX276087.14| Zebrafish DNA sequence from clone CH211-270M20 in linkage group 10,
              complete sequence
          Length = 167208

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     tctatcacatgcatagtgt 95
              |||||||||||||||||||
Sbjct: 107201 tctatcacatgcatagtgt 107219

>gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, complete sequence
          Length = 160763

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 26     ctccagaaaaagaaatttttgtt 48
              |||||||||||||||| ||||||
Sbjct: 147996 ctccagaaaaagaaatctttgtt 148018

>gb|AC069015.8|AC069015 Mus musculus  BAC MGS3-174O22 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 72747

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    aaaagaaatttttgttacacaaa 55
             ||||||||||||| |||||||||
Sbjct: 35960 aaaagaaatttttcttacacaaa 35938

>emb|AL840634.16| Zebrafish DNA sequence from clone CH211-4P8 in linkage group 9, complete
              sequence
          Length = 160566

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 30     agaaaaagaaatttttgttacacaaat 56
              ||||||||||||||||| || ||||||
Sbjct: 149318 agaaaaagaaatttttggtagacaaat 149344

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 59      tccaacactccatgcaagt 77
               |||||||||||||||||||
Sbjct: 4804085 tccaacactccatgcaagt 4804103

>emb|BX470092.12| Mouse DNA sequence from clone RP23-230K20 on chromosome X, complete
             sequence
          Length = 95593

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    agaaaaagaaatttttgtt 48
             |||||||||||||||||||
Sbjct: 76912 agaaaaagaaatttttgtt 76930

>gb|AC156585.2| Glomus intraradices clone JGIAHZS-25B19, complete sequence
          Length = 32065

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 32    aaaaagaaatttttgttacacaa 54
             |||||||||||| ||||||||||
Sbjct: 18449 aaaaagaaatttatgttacacaa 18471

>gb|AC006584.12|AC006584 Mus musculus  BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete
              sequence
          Length = 160288

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     aaaagaaatttttgttacacaaa 55
              ||||||||||||| |||||||||
Sbjct: 148262 aaaagaaatttttcttacacaaa 148284

>emb|CR407543.6| Zebrafish DNA sequence from clone CH211-63M22 in linkage group 10,
             complete sequence
          Length = 105526

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 77    tctatcacatgcatagtgt 95
             |||||||||||||||||||
Sbjct: 82717 tctatcacatgcatagtgt 82699

>gb|AC148319.2| Mus musculus BAC clone RP24-540G19 from Y, complete sequence
          Length = 159680

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    aaaagaaatttttgttacacaaa 55
             ||||||||||||| |||||||||
Sbjct: 64431 aaaagaaatttttcttacacaaa 64453

>emb|Z83317.1|CEF13G11 Caenorhabditis elegans Cosmid F13G11, complete sequence
          Length = 38225

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   aaaagaaatttttgttacacaaa 55
            |||||||||||||||| ||||||
Sbjct: 6356 aaaagaaatttttgtttcacaaa 6378

>emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chromosome 4, complete
             sequence
          Length = 222046

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    aagaaatttttgttacaca 53
             |||||||||||||||||||
Sbjct: 33797 aagaaatttttgttacaca 33779

>emb|X77784.1|XV18RRNA X.vesparum 18 rRNA gene
          Length = 3316

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   agaaaaagaaatttttgtt 48
            |||||||||||||||||||
Sbjct: 2524 agaaaaagaaatttttgtt 2542

>emb|X74763.1|XV18SRRN X.vesparum gene for 18S ribosomal RNA (partial)
          Length = 2177

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   agaaaaagaaatttttgtt 48
            |||||||||||||||||||
Sbjct: 1545 agaaaaagaaatttttgtt 1563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,765,419
Number of Sequences: 3902068
Number of extensions: 1765419
Number of successful extensions: 116166
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115996
Number of HSP's gapped (non-prelim): 170
length of query: 153
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 132
effective length of database: 17,151,101,840
effective search space: 2263945442880
effective search space used: 2263945442880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)