>emb|BX511157.10| Zebrafish DNA sequence from clone DKEY-197M14 in linkage group 5,
             complete sequence
          Length = 159528

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    tgaagttttacagtgtaaaaa 92
             |||||||||||||||||||||
Sbjct: 11082 tgaagttttacagtgtaaaaa 11062

>gb|AC108439.22| Mus musculus chromosome 8, clone RP23-214F1, complete sequence
          Length = 205732

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     tcattcacataaagaattaca 48
              |||||||||||||||||||||
Sbjct: 106555 tcattcacataaagaattaca 106535

>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete sequence
          Length = 192020

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ttgcattctcctctttgcca 27
              ||||||||||||||||||||
Sbjct: 107855 ttgcattctcctctttgcca 107836

>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence
          Length = 224704

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ttgcattctcctctttgcca 27
              ||||||||||||||||||||
Sbjct: 213056 ttgcattctcctctttgcca 213075

>gb|AC133189.3| Mus musculus BAC clone RP23-354M9 from chromosome 15, complete sequence
          Length = 198577

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tctcctctttgccatcattc 33
             ||||||||||||||||||||
Sbjct: 16504 tctcctctttgccatcattc 16485

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 27      atcattcacataaagaatta 46
               ||||||||||||||||||||
Sbjct: 2582196 atcattcacataaagaatta 2582215

>gb|AC169705.1| Rhesus Macaque  BAC CH250-174C17 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 181644

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      ttaattttgcattctcctc 20
              |||||||||||||||||||
Sbjct: 174270 ttaattttgcattctcctc 174288

>gb|AC146187.2| Pan troglodytes BAC clone RP43-25A10 from 7, complete sequence
          Length = 156796

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     ttaattttgcattctcctc 20
             |||||||||||||||||||
Sbjct: 86262 ttaattttgcattctcctc 86280

>gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome 7, complete sequence
          Length = 183421

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     tgccatcattcacataaag 41
              |||||||||||||||||||
Sbjct: 100383 tgccatcattcacataaag 100401

>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     tgcattctcctctttgcca 27
             |||||||||||||||||||
Sbjct: 67255 tgcattctcctctttgcca 67237

>gb|AC133607.3| Mus musculus BAC clone RP23-153N7 from chromosome 18, complete sequence
          Length = 223708

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     cattcacataaagaattac 47
              |||||||||||||||||||
Sbjct: 216085 cattcacataaagaattac 216067

>emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in linkage group 6,
             complete sequence
          Length = 178487

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    aagttttacagtgtaaaaa 92
             |||||||||||||||||||
Sbjct: 72453 aagttttacagtgtaaaaa 72435

>gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184092

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 3      taattttgcattctcctctttgccatc 29
              ||||||||||||||| |||||| ||||
Sbjct: 139552 taattttgcattctcttctttgtcatc 139578

>gb|AC127234.3| Mus musculus BAC clone RP24-566K14 from chromosome 18, complete
             sequence
          Length = 181515

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    cattcacataaagaattac 47
             |||||||||||||||||||
Sbjct: 50183 cattcacataaagaattac 50165

>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence
          Length = 124069

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    taaagaattacatctccat 55
             |||||||||||||||||||
Sbjct: 29563 taaagaattacatctccat 29545

>emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 in linkage group 16,
              complete sequence
          Length = 214872

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     gttttacagtgtaaaaatg 94
              |||||||||||||||||||
Sbjct: 141678 gttttacagtgtaaaaatg 141660

>emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 158745

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 36     ataaagaattacatctccataag 58
              |||||||||||||| ||||||||
Sbjct: 150086 ataaagaattacatatccataag 150064

>emb|AL049749.2|HS293L6 Human DNA sequence from clone RP1-293L6 on chromosome 22 Contains the
             first exon of the CACNG2 gene for voltage-dependent
             calcium channel gamma subunit 2, ESTs, STSs, GSSs and a
             putative CpG island, complete sequence
          Length = 99497

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    attctcctctttgccatca 30
             |||||||||||||||||||
Sbjct: 68142 attctcctctttgccatca 68124

>emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in linkage group 13,
            complete sequence
          Length = 149899

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   aagttttacagtgtaaaaa 92
            |||||||||||||||||||
Sbjct: 1386 aagttttacagtgtaaaaa 1404

>emb|BX664749.12| Zebrafish DNA sequence from clone DKEY-53M7 in linkage group 5, complete
              sequence
          Length = 181789

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     tgaagttttacagtgtaaa 90
              |||||||||||||||||||
Sbjct: 116454 tgaagttttacagtgtaaa 116472

>dbj|AK092057.1| Homo sapiens cDNA FLJ34738 fis, clone MESAN2008536
          Length = 2293

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 14   tctcctctttgccatcatt 32
            |||||||||||||||||||
Sbjct: 2113 tctcctctttgccatcatt 2131

>gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete sequence
          Length = 175938

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    tctcctctttgccatcatt 32
             |||||||||||||||||||
Sbjct: 21524 tctcctctttgccatcatt 21542

>emb|BX321892.13| Zebrafish DNA sequence from clone DKEYP-21D12 in linkage group 25,
              complete sequence
          Length = 195705

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     gttttacagtgtaaaaatg 94
              |||||||||||||||||||
Sbjct: 172251 gttttacagtgtaaaaatg 172233

>emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in linkage group 5,
            complete sequence
          Length = 195181

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   tgaagttttacagtgtaaa 90
            |||||||||||||||||||
Sbjct: 4452 tgaagttttacagtgtaaa 4434

>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete
              sequence
          Length = 227940

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     aagttttacagtgtaaaaa 92
              |||||||||||||||||||
Sbjct: 200724 aagttttacagtgtaaaaa 200706

>emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chromosome 2, complete
            sequence
          Length = 48121

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 69   tactgaagttttacagtgt 87
            |||||||||||||||||||
Sbjct: 5179 tactgaagttttacagtgt 5197

>emb|BX323886.7| Zebrafish DNA sequence from clone CH211-127B11 in linkage group 4,
              complete sequence
          Length = 158224

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 75     agttttacagtgtaaaaat 93
              |||||||||||||||||||
Sbjct: 107590 agttttacagtgtaaaaat 107608

>gb|AC113486.11| Mus musculus chromosome 14, clone RP23-354M3, complete sequence
          Length = 212011

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 38    aaagaattacatctccataagtacaag 64
             |||||||||||||||  ||||||||||
Sbjct: 78793 aaagaattacatctctttaagtacaag 78819

>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
              sequence
          Length = 227942

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      ttaattttgcattctcctc 20
              |||||||||||||||||||
Sbjct: 160183 ttaattttgcattctcctc 160201

>gb|AC174651.2| Mus musculus BAC clone CH25-241D1 from chromosome 6, complete
           sequence
          Length = 120448

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   ttttgcattctcctctttg 24
           |||||||||||||||||||
Sbjct: 451 ttttgcattctcctctttg 433

>emb|BX284660.1| Human DNA sequence from clone RP1-293L6 on chromosome 22, complete
             sequence
          Length = 70881

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    attctcctctttgccatca 30
             |||||||||||||||||||
Sbjct: 29891 attctcctctttgccatca 29909

>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence
          Length = 132994

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 14     tctcctctttgccatcattcaca 36
              |||||||||||||||||| ||||
Sbjct: 109959 tctcctctttgccatcatccaca 109937

>emb|AL603826.18| Mouse DNA sequence from clone RP23-206P11 on chromosome 11, complete
              sequence
          Length = 145299

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     tctcctctttgccatcatt 32
              |||||||||||||||||||
Sbjct: 116569 tctcctctttgccatcatt 116587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,161,360
Number of Sequences: 3902068
Number of extensions: 1161360
Number of successful extensions: 94522
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94436
Number of HSP's gapped (non-prelim): 86
length of query: 101
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 80
effective length of database: 17,151,101,840
effective search space: 1372088147200
effective search space used: 1372088147200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)