| Clone Name | rbast05e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y258_METJA (Q57706) Hypothetical protein MJ0258 | 29 | 3.7 | 2 | EFTU_CHLTR (P26622) Elongation factor Tu (EF-Tu) | 28 | 6.3 |
|---|
>Y258_METJA (Q57706) Hypothetical protein MJ0258| Length = 404 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -3 Query: 234 VEGHAVADGRLDALPAAGAELKNVERARVNR 142 +E + +A GR DAL A + LKN E + +N+ Sbjct: 183 LENYKIAGGRKDALTAKFSSLKNAELSFINK 213
>EFTU_CHLTR (P26622) Elongation factor Tu (EF-Tu)| Length = 393 Score = 28.1 bits (61), Expect = 6.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 139 HTVYTCALYILQLRSGGR 192 HT + CA+Y+LQ GGR Sbjct: 301 HTQFKCAVYVLQKEEGGR 318 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,866,240 Number of Sequences: 219361 Number of extensions: 584529 Number of successful extensions: 1477 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1477 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)