ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast04c10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide synthase (aos gene) Length = 1819 Score = 789 bits (398), Expect = 0.0 Identities = 405/406 (99%), Gaps = 1/406 (0%) Strand = Plus / Minus Query: 2 acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1814 acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 1755 Query: 62 caaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaagcaaccgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1754 caaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaag-aaccgaa 1696 Query: 122 caagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatatagcgag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 caagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatatagcgag 1636 Query: 182 gcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgatccctt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 gcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgatccctt 1576 Query: 242 tgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgttgcct 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 tgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgttgcct 1516 Query: 302 tggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggccgactttggccgtga 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1515 tggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggccgactttggccgtga 1456 Query: 362 aggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 407 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1455 aggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 1410
>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA sequence Length = 1870 Score = 168 bits (85), Expect = 9e-39 Identities = 106/113 (93%) Strand = Plus / Minus Query: 288 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 347 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1540 accggacgtggccttggtgacgccggtgaactcaaccttggtgccgagcaggtcgacccc 1481 Query: 348 gactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagcc 400 ||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 gacgtcggcggtgaaggtgtcgtaccggaggaacagctccaccaccaggagcc 1428 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 2 acgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaagattgc 61 ||||||| || | |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1824 acgccaagagtgagaatcttattacaggaaagtccggcttattacactgggcaagattgc 1765 Query: 62 caaaagtaaa 71 ||||||||| Sbjct: 1764 gaaaagtaaa 1755 Score = 56.0 bits (28), Expect = 9e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 103 atgctgcgaagcaaccgaacaagatgcatgca 134 |||| ||||||||||||||||||||||||||| Sbjct: 1718 atgcagcgaagcaaccgaacaagatgcatgca 1687 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 172 atatagcgaggcacgtacgtacgt 195 |||||||||||||||||||||||| Sbjct: 1665 atatagcgaggcacgtacgtacgt 1642
>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds Length = 1779 Score = 147 bits (74), Expect = 3e-32 Identities = 105/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 288 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 347 ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1472 accggacgtggccttggtgacgccggtgaactcaaccttggtgcccagcaggtcgacccc 1413 Query: 348 gactttggccgtgaaggtgtcgtacc-ggaggaacagctccaccaccaggagcc 400 ||| | ||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1412 gacgtcggcggtgaaggtgtcgtaccgggaggaacagctccaccaccaggagcc 1359 Score = 109 bits (55), Expect = 7e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 15 gaatcttattgtagaaaagtccggcttattacactgggcaagattgccaaaagtaaacac 74 |||||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1746 gaatcttattacaggaaagtacggcttattacactgggcaagattgcgaaaagtaa---- 1691 Query: 75 aacacacgcacacatacacgagggcacaatgctgcgaagcaaccgaacaagatgcatgca 134 ||||| | ||||||||||| ||||||| |||| |||||||||||| ||||| |||||||| Sbjct: 1690 aacacgcacacacatacacaagggcaccatgcagcgaagcaaccggacaaggtgcatgca 1631 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 172 atatagcgaggcacgtacgtacgtacgtgatgacgg 207 |||||||||||||||||||||||| |||| |||||| Sbjct: 1606 atatagcgaggcacgtacgtacgtgcgtgctgacgg 1571
>emb|AJ251304.1|HVU251304 Hordeum vulgare mRNA for allene oxide synthase (aos2 gene) Length = 1722 Score = 111 bits (56), Expect = 2e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 288 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 347 |||||| || ||||||||||| |||||||| |||||||||| |||||| ||||||| ||| Sbjct: 1467 accggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacgcc 1408 Query: 348 gactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 407 ||| | ||| || |||||||||||||||||||||| || || |||||||||| |||||| Sbjct: 1407 gacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgac 1348
>ref|NM_187610.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1361 gtgaaggtgtcgtaccggaggaagagctc 1333
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 6578480 gtgaaggtgtcgtaccggaggaagagctc 6578452
>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene oxide synthase (AOS) gene, complete cds Length = 2465 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1756 gtgaaggtgtcgtaccggaggaagagctc 1728
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 121242 gtgaaggtgtcgtaccggaggaagagctc 121214
>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA, complete cds Length = 1775 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1478 gtgaaggtgtcgtaccggaggaagagctc 1450
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 6577693 gtgaaggtgtcgtaccggaggaagagctc 6577665
>gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, complete cds Length = 1809 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1487 gtgaaggtgtcgtaccggaggaagagctc 1459
>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full insert sequence Length = 1974 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1624 gtgaaggtgtcgtaccggaggaagagctc 1596
>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full insert sequence Length = 1843 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 ||||||||||||||||||||||| ||||| Sbjct: 1501 gtgaaggtgtcgtaccggaggaagagctc 1473
>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence Length = 181052 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 acacaacacacgcacacatacac 93 ||||||||||||||||||||||| Sbjct: 104684 acacaacacacgcacacatacac 104662
>gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181395 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgaggg 98 ||||||||||||||||||||||| Sbjct: 68544 acacacgcacacatacacgaggg 68522
>gb|AC022343.2|AC022343 Drosophila melanogaster, chromosome X, region 12E-12F, BAC clone BACR33F13, complete sequence Length = 164853 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 acacaacacacgcacacatacac 93 ||||||||||||||||||||||| Sbjct: 161072 acacaacacacgcacacatacac 161094
>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete sequence Length = 299868 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 acacaacacacgcacacatacac 93 ||||||||||||||||||||||| Sbjct: 103225 acacaacacacgcacacatacac 103247
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgaggg 98 ||||||||||||||||||||||| Sbjct: 221237 acacacgcacacatacacgaggg 221215
>emb|AL138971.1|DMBR43E12 Drosophila melanogaster BAC clone BACR43E12 Length = 102621 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgaggg 98 ||||||||||||||||||||||| Sbjct: 51435 acacacgcacacatacacgaggg 51413
>gb|DQ177691.1| Uncultured bacterium clone 3223 putative membrane-bound nitrate reductase (narG) gene, partial cds Length = 641 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 ggccgtgaaggtgtcgtaccgg 375 |||||||||||||||||||||| Sbjct: 147 ggccgtgaaggtgtcgtaccgg 126
>emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in linkage group 7, complete sequence Length = 180396 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 taaacacaacacacgcacacatacac 93 |||||||||||||| ||||||||||| Sbjct: 99571 taaacacaacacacacacacatacac 99596
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 320 caaccttggtgccgagaaggtcgaggccga 349 |||||||||| ||| ||||||||||||||| Sbjct: 1481400 caaccttggtcccgggaaggtcgaggccga 1481371
>gb|AC120982.2| Homo sapiens chromosome 19 clone LLNLR-289A1, complete sequence Length = 32173 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 acacaacacacgcacacataca 92 |||||||||||||||||||||| Sbjct: 21490 acacaacacacgcacacataca 21511
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 158060 aaacacaacacacacacacatacac 158036
>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence Length = 208907 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacat 89 ||||||||||||||||||||| Sbjct: 150304 aaacacaacacacgcacacat 150324
>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete sequence Length = 226435 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 13201 aaacacaacacacacacacatacac 13177
>gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosome 10, complete sequence Length = 150502 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 59535 aaacacaacacacacacacatacac 59511
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 162059 aaacacaacacacacacacatacac 162083
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgagggca 100 |||||||||||||||||| |||||| Sbjct: 74496 acacacgcacacatacacaagggca 74472
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 22724 aaacacaacacacacacacatacac 22748
>gb|AF499544.1| Wilsonia pusilla isolate 76 mitochondrial control region, partial sequence Length = 343 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 gaggcacgtacgtacgtacgt 199 ||||||||||||||||||||| Sbjct: 57 gaggcacgtacgtacgtacgt 77
>gb|AF499538.1| Wilsonia pusilla isolate 70 mitochondrial control region, partial sequence Length = 343 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 gaggcacgtacgtacgtacgt 199 ||||||||||||||||||||| Sbjct: 57 gaggcacgtacgtacgtacgt 77
>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14 Length = 68050 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 cgtacactactaaggtagata 174 ||||||||||||||||||||| Sbjct: 24283 cgtacactactaaggtagata 24303
>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete sequence Length = 196122 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 18467 aaacacaacacacacacacatacac 18443
>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete sequence Length = 202812 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 63131 aaacacaacacacacacacatacac 63107
>gb|AE005710.1| Caulobacter crescentus CB15 section 36 of 359 of the complete genome Length = 11283 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 gccgagaaggtcgaggccgac 350 ||||||||||||||||||||| Sbjct: 5932 gccgagaaggtcgaggccgac 5912
>gb|DQ428532.1| Sorghum propinquum locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428531.1| Sorghum bicolor voucher PI585454 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428530.1| Sorghum bicolor voucher PI267539 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428529.1| Sorghum bicolor voucher PI267408 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428528.1| Sorghum bicolor voucher PI221607 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428527.1| Sorghum bicolor voucher PI152702 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428525.1| Sorghum bicolor voucher NSL87902 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428524.1| Sorghum bicolor voucher NSL87666 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428523.1| Sorghum bicolor voucher NSL77217 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428522.1| Sorghum bicolor voucher NSL77034 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428519.1| Sorghum bicolor voucher NSL55243 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428518.1| Sorghum bicolor voucher NSL51365 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428516.1| Sorghum bicolor voucher NSL51030a locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428515.1| Sorghum bicolor voucher NSL50875 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>gb|DQ428514.1| Sorghum bicolor voucher BTx623 locus PRC1203 genomic sequence Length = 518 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 358 gtgaaggtgtcgtaccggaggaacagctc 386 |||||||||||||| |||||||| ||||| Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctc 296
>dbj|AB035859.1| Coturnix coturnix japonica DNA, microsatellite GUJ0049 sequence Length = 243 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacatacac 93 |||||||||||||||||||| |||| Sbjct: 130 aaacacaacacacgcacacacacac 154
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 acacacgcacacatacacgagggca 100 |||||||||||||||||| |||||| Sbjct: 120282 acacacgcacacatacacaagggca 120306
>dbj|AK159060.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530047H15 product:hypothetical protein, full insert sequence Length = 4837 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgagggca 100 |||||||||||||||||| |||||| Sbjct: 496 acacacgcacacatacacaagggca 472
>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence Length = 208509 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgagggca 100 |||||| |||||||||||||||||| Sbjct: 175831 acacacacacacatacacgagggca 175807
>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence Length = 166987 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacacg 94 |||||||||| |||||||||||||| Sbjct: 148735 aacacaacacgcgcacacatacacg 148759
>gb|AF172724.1|AF172724 Caulobacter crescentus structural maintenance of chromosomes protein homolog Smc (smc) gene, complete cds Length = 3701 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gccgagaaggtcgaggccgac 350 ||||||||||||||||||||| Sbjct: 2245 gccgagaaggtcgaggccgac 2265
>emb|BX572080.18| Zebrafish DNA sequence from clone DKEY-22N17 in linkage group 13, complete sequence Length = 224120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 acacacgcacacatacacgag 96 ||||||||||||||||||||| Sbjct: 206971 acacacgcacacatacacgag 206951
>gb|AC102262.9| Mus musculus chromosome 15, clone RP24-216B4, complete sequence Length = 191626 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 acacacgcacacatacacgagggca 100 |||||| |||||||||||||||||| Sbjct: 140059 acacacacacacatacacgagggca 140083
>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence Length = 171830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 acacacgcacacatacacgag 96 ||||||||||||||||||||| Sbjct: 140933 acacacgcacacatacacgag 140953
>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence Length = 191241 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacatacac 93 ||||||||||||| ||||||||||| Sbjct: 62147 aaacacaacacacacacacatacac 62171
>gb|AY780525.1| Bacillus sp. MB24 transposon TnARS1, complete sequence Length = 13790 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aagcaaccgaacaagatgca 130 |||||||||||||||||||| Sbjct: 4548 aagcaaccgaacaagatgca 4567
>ref|XM_466076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 673 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gaggaacagctccaccaccaggagccgg 402 ||||| ||||||||||||||| |||||| Sbjct: 372 gaggagcagctccaccaccagcagccgg 345
>gb|AY022493.1| Oryza sativa microsatellite MRG4818 containing (AGT)X12, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcacgtacgtacgtacgtga 201 |||||||||||||||||||| Sbjct: 213 gcacgtacgtacgtacgtga 194
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcacgtacgtacgtacgtga 201 |||||||||||||||||||| Sbjct: 13654 gcacgtacgtacgtacgtga 13673
>gb|AC122060.3| Mus musculus BAC clone RP24-468P4 from chromosome 12, complete sequence Length = 170916 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caacacacgcacacatacac 93 |||||||||||||||||||| Sbjct: 117 caacacacgcacacatacac 98
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence Length = 159753 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 7081 aacacaacacacacacacatacac 7058
>gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, complete sequence Length = 172076 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 83908 aacacaacacacgcacacacacac 83931
>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence Length = 224351 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 26137 aacacaacacacacacacatacac 26160
>emb|AJ427928.1|ABI427928 Adalia bipunctata microsatellite DNA, clone Ab5 Length = 126 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 83 aacacaacacacgcacacacacac 60
>gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosome 8, complete sequence Length = 221035 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ttgccaaaagtaaacacaac 77 |||||||||||||||||||| Sbjct: 147001 ttgccaaaagtaaacacaac 146982
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 caacacacgcacacatacac 93 |||||||||||||||||||| Sbjct: 5678 caacacacgcacacatacac 5697
>gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, complete sequence Length = 180922 Score = 40.1 bits (20), Expect = 5.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 59 tgccaaaagtaaacaca-acacacgcacacatacac 93 ||||||||||||||||| |||||| |||||| |||| Sbjct: 12154 tgccaaaagtaaacacacacacacacacacacacac 12189
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 2289 aacacaacacacgcacacacacac 2266
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 32998 aacacaacacacgcacacacacac 33021
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 120658 aacacaacacacgcacacacacac 120635
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 12879 aacacaacacacgcacacacacac 12902
>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence Length = 88701 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 6406 aacacaacacacgcacacacacac 6383
>emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 on chromosome Xp22.11-22.2, complete sequence Length = 134403 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 caaaagtaaacacaacacacgcacacatacac 93 |||||| | |||| |||||||||||||||||| Sbjct: 87453 caaaagaatacaccacacacgcacacatacac 87422
>emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chromosome 1 Contains part of the NEGR1 gene for neuronal growth regulator 1, complete sequence Length = 149587 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ttgccaaaagtaaacacaac 77 |||||||||||||||||||| Sbjct: 115371 ttgccaaaagtaaacacaac 115352
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the 5' end of the RAB3B gene for RAB3B member RAS oncogene family, a 40s ribosomal protein S26 (RPS26) pseudogene, the gene for endoplasmic reticulum thioredoxin superfamily member 18 kDa (TLP19), three novel genes, the 5' end of the gene for a novel protein similar to RNA polymerase B transcription factor 3 (MGC23908) and a CpG island, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 80627 aacacaacacacacacacatacac 80604
>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence Length = 154201 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagatgcatgcacatgcatg 142 |||||||||||||||||||| Sbjct: 2136 aagatgcatgcacatgcatg 2117
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC Library) complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 128194 aacacaacacacacacacatacac 128171
>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete sequence Length = 193801 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacacatacacgagggcacaatgc 106 |||||||||| ||||||||||||| Sbjct: 155246 cacacatacaggagggcacaatgc 155269
>gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172752 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 38593 aacacaacacacacacacatacac 38570
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 acgtacgtacgtacgtgatg 203 |||||||||||||||||||| Sbjct: 119570 acgtacgtacgtacgtgatg 119589
>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE Length = 199033 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 57867 aacacaacacacgcacacacacac 57890 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 43743 aacacaacacacgcacacacacac 43766
>emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in linkage group 25, complete sequence Length = 187055 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 taaacacaacacacgcacac 87 |||||||||||||||||||| Sbjct: 60071 taaacacaacacacgcacac 60052
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17, complete sequence Length = 161999 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 aacacacgcacacatacacg 94 |||||||||||||||||||| Sbjct: 153412 aacacacgcacacatacacg 153393
>emb|BX294444.7| Zebrafish DNA sequence from clone CH211-281E15 in linkage group 14, complete sequence Length = 169694 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 agtaaacacaacacacgcacacatacac 93 |||||||||||||||| |||||| |||| Sbjct: 155608 agtaaacacaacacacacacacacacac 155581
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 gccgagaaggtcgaggccga 349 |||||||||||||||||||| Sbjct: 4240169 gccgagaaggtcgaggccga 4240188
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23, complete sequence Length = 74936 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacaca 88 |||||||||||||||||||| Sbjct: 39618 aaacacaacacacgcacaca 39599
>gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, complete sequence Length = 163180 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaacacaacacacgcacacataca 92 ||||||||||||| |||||||||| Sbjct: 111135 aaacacaacacacacacacataca 111158
>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence Length = 187380 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagatgcatgcacatgcatg 142 |||||||||||||||||||| Sbjct: 178893 aagatgcatgcacatgcatg 178874
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 agtaaacacaacacacgcacacatacac 93 |||| ||||||||||| ||||||||||| Sbjct: 72971 agtacacacaacacacacacacatacac 72998
>gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, complete sequence Length = 180160 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 acaacacacgcacacatacacgag 96 |||||||||||||||| ||||||| Sbjct: 34958 acaacacacgcacacacacacgag 34935
>gb|DQ020086.1| Heliconius melpomene clone Hm16 microsatellite sequence Length = 269 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 acacaacacacgcacacatacacg 94 ||||||||||| |||||||||||| Sbjct: 119 acacaacacacacacacatacacg 96
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 agtaaacacaacacacgcacacatacac 93 ||||| ||||||||||||||||| |||| Sbjct: 101300 agtaatcacaacacacgcacacaaacac 101273
>emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 in linkage group 23, complete sequence Length = 107132 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaacacaacacacgcacaca 88 |||||||||||||||||||| Sbjct: 45043 aaacacaacacacgcacaca 45024
>gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 map 18q21, complete sequence Length = 180000 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 acaacacacgcacacatacacgag 96 |||||||||||||||| ||||||| Sbjct: 166575 acaacacacgcacacacacacgag 166598
>gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-297D21, complete sequence Length = 200618 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 42154 aacacaacacacacacacatacac 42177
>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190387 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 |||||||||||| ||||||||||| Sbjct: 77774 aacacaacacacacacacatacac 77751
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 acgtacgtacgtacgtgatg 203 |||||||||||||||||||| Sbjct: 3653278 acgtacgtacgtacgtgatg 3653297
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcacgtacgtacgtacgtga 201 |||||||||||||||||||| Sbjct: 29529152 gcacgtacgtacgtacgtga 29529171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 gaggaacagctccaccaccaggagccgg 402 ||||| ||||||||||||||| |||||| Sbjct: 19475227 gaggagcagctccaccaccagcagccgg 19475254
>gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128729 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 aacacaacacacgcacacatacac 93 ||||||||||||||||||| |||| Sbjct: 36559 aacacaacacacgcacacacacac 36536
>gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosome 13, complete sequence Length = 186758 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 cacacatacacgagggcacaatgc 106 |||||||||| ||||||||||||| Sbjct: 161348 cacacatacaggagggcacaatgc 161325
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 gaggaacagctccaccaccaggagccgg 402 ||||| ||||||||||||||| |||||| Sbjct: 92754 gaggagcagctccaccaccagcagccgg 92781
>dbj|AK120980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A15, full insert sequence Length = 672 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gaggaacagctccaccaccaggagccgg 402 ||||| ||||||||||||||| |||||| Sbjct: 371 gaggagcagctccaccaccagcagccgg 344
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 gccgagaaggtcgaggccga 349 |||||||||||||||||||| Sbjct: 3673435 gccgagaaggtcgaggccga 3673454
>gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complete sequence Length = 196288 Score = 40.1 bits (20), Expect = 5.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 59 tgccaaaagtaaacaca-acacacgcacacatacac 93 ||||||||||||||||| |||||| |||||| |||| Sbjct: 167863 tgccaaaagtaaacacacacacacacacacacacac 167898
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence Length = 219234 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caacacacgcacacatacac 93 |||||||||||||||||||| Sbjct: 182046 caacacacgcacacatacac 182027
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 acacaacacacgcacacatacacg 94 |||||||||| ||||||||||||| Sbjct: 32968 acacaacacatgcacacatacacg 32945
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caacacacgcacacatacac 93 |||||||||||||||||||| Sbjct: 217293 caacacacgcacacatacac 217274
>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence Length = 145822 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 62 caaaagtaaacacaacacacgcacacatacac 93 |||||| | |||| |||||||||||||||||| Sbjct: 30697 caaaagaatacactacacacgcacacatacac 30728
>gb|AF398400.1| Beauveria bassiana isolate Bsp 590 small subunit ribosomal RNA gene, partial sequence Length = 462 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggcacgtacgtacgtacgtg 200 |||||||||||||||||||| Sbjct: 170 ggcacgtacgtacgtacgtg 189
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcacgtacgtacgtacgtga 201 |||||||||||||||||||| Sbjct: 113422 gcacgtacgtacgtacgtga 113441
>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete sequence Length = 175689 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acaacacacgcacacataca 92 |||||||||||||||||||| Sbjct: 95655 acaacacacgcacacataca 95636 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,928,577 Number of Sequences: 3902068 Number of extensions: 2928577 Number of successful extensions: 187371 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 186523 Number of HSP's gapped (non-prelim): 846 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
