>GMEB2_MOUSE (P58929) Glucocorticoid modulatory element-binding protein 2|
           (GMEB-2)
          Length = 530

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +2

Query: 161 SP*KESNMKRRVFDPGCLAFTIFLIHQSKLISPS---SNLTSMMVGQVSSTLPE*IL 322
           SP K   + R    P  +A  +        +SP    S LTS+ +G+V STLP  +L
Sbjct: 354 SPMKRPRLARATSGPAAMASQVLTQSAQIALSPGMPVSQLTSVPLGKVVSTLPSTVL 410

>PO2F3_RAT (P42571) POU domain, class 2, transcription factor 3|
           (Octamer-binding transcription factor 11) (Oct-11)
           (Transcription factor Skn-1)
          Length = 430

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +2

Query: 233 IHQSKLISPSSNLTSMMVGQVSSTLP 310
           I+ S+L+SPS +L S+ V  V ST+P
Sbjct: 344 IYNSRLVSPSGSLGSLSVPPVHSTMP 369

>GMEB2_RAT (O88873) Glucocorticoid modulatory element-binding protein 2|
           (GMEB-2)
          Length = 529

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = +2

Query: 161 SP*KESNMKRRVFDPGCLAFTIFLIHQSKLIS-----PSSNLTSMMVGQVSSTLPE*IL 322
           SP K   + R    P  +A  +  + QS  I+     P S LTS+ +G+V STLP  +L
Sbjct: 353 SPMKRPRLARATSGPAAMASQV--LTQSAQIALGPGMPMSQLTSVPLGKVVSTLPSTVL 409


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,360,601
Number of Sequences: 219361
Number of extensions: 1287694
Number of successful extensions: 2693
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2693
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)