>PCDAA_PANTR (Q5DRF4) Protocadherin alpha 10 precursor (PCDH-alpha10)|
          Length = 948

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 337 APAM-ADPLGSAGGKVQEEVMREFAALMASGTLRASEA 227
           APA+ A P GSAGG V E V+R   A      +RA +A
Sbjct: 561 APALLASPAGSAGGAVSELVLRSVGAGHVVAKVRAVDA 598

>PCDAA_HUMAN (Q9Y5I2) Protocadherin alpha 10 precursor (PCDH-alpha10)|
          Length = 948

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 337 APAM-ADPLGSAGGKVQEEVMREFAALMASGTLRASEA 227
           APA+ A P GSAGG V E V+R   A      +RA +A
Sbjct: 561 APALLASPAGSAGGAVSELVLRSVVAGHVVAKVRAVDA 598

>PNS1_YARLI (Q6C938) Protein PNS1|
          Length = 571

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 29  YYVNKSDK*IEFHAAMLQYK*AIVPNYYQFAVASEIERV*NSFRQL 166
           YY +KSD+ +  HAAM  ++ A+  +    ++ S I  + N  RQ+
Sbjct: 348 YYCSKSDQGMPKHAAMSSFRRAVTYSLGSISLGSLIVSIINFIRQI 393

>PCDAC_PANTR (Q5DRF2) Protocadherin alpha 12 precursor (PCDH-alpha12)|
          Length = 941

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 337 APAM-ADPLGSAGGKVQEEVMREFAALMASGTLRASEA 227
           APA+ A P GSAGG V E V R   A      +RA +A
Sbjct: 562 APALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAVDA 599

>PCDAC_HUMAN (Q9UN75) Protocadherin alpha 12 precursor (PCDH-alpha12)|
          Length = 941

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 337 APAM-ADPLGSAGGKVQEEVMREFAALMASGTLRASEA 227
           APA+ A P GSAGG V E V R   A      +RA +A
Sbjct: 562 APALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAVDA 599


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,840,468
Number of Sequences: 219361
Number of extensions: 601319
Number of successful extensions: 1525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)