>ref|XM_473854.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1314

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                        
Query: 239  gcaggagcgtgctgccgagcgcggcgcggagggcctccgcctcgtccttggggagcaccg 298
            ||||||||||||| ||||||||||||||||||   ||  |||||||| |||||| |||| 
Sbjct: 1297 gcaggagcgtgctcccgagcgcggcgcggaggctgtcgacctcgtccctggggatcacca 1238

                               
Query: 299  ccgtgacgacgcggccgcg 317
            |||||||||||||||||||
Sbjct: 1237 ccgtgacgacgcggccgcg 1219

>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 239   gcaggagcgtgctgccgagcgcggcgcggagggcctccgcctcgtccttggggagcaccg 298
             ||||||||||||| ||||||||||||||||||   ||  |||||||| |||||| |||| 
Sbjct: 15144 gcaggagcgtgctcccgagcgcggcgcggaggctgtcgacctcgtccctggggatcacca 15085

                                
Query: 299   ccgtgacgacgcggccgcg 317
             |||||||||||||||||||
Sbjct: 15084 ccgtgacgacgcggccgcg 15066

>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
              complete sequence
          Length = 150551

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                          
Query: 239    gcaggagcgtgctgccgagcgcggcgcggagggcctccgcctcgtccttggggagcaccg 298
              ||||||||||||| ||||||||||||||||||   ||  |||||||| |||||| |||| 
Sbjct: 130437 gcaggagcgtgctcccgagcgcggcgcggaggctgtcgacctcgtccctggggatcacca 130378

                                 
Query: 299    ccgtgacgacgcggccgcg 317
              |||||||||||||||||||
Sbjct: 130377 ccgtgacgacgcggccgcg 130359

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                            
Query: 239      gcaggagcgtgctgccgagcgcggcgcggagggcctccgcctcgtccttggggagcaccg 298
                ||||||||||||| ||||||||||||||||||   ||  |||||||| |||||| |||| 
Sbjct: 31033064 gcaggagcgtgctcccgagcgcggcgcggaggctgtcgacctcgtccctggggatcacca 31033005

                                   
Query: 299      ccgtgacgacgcggccgcg 317
                |||||||||||||||||||
Sbjct: 31033004 ccgtgacgacgcggccgcg 31032986

>emb|X88779.1|ZMGLOSSY Z.mays Glossy2 locus DNA
          Length = 6343

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 295  accgccgtgacgacgcggccgcgcccgtc 323
            ||||||||||||| |||||||||||||||
Sbjct: 4684 accgccgtgacgaggcggccgcgcccgtc 4656

>gb|AE006033.1| Caulobacter crescentus CB15 section 359 of 359 of the complete
           genome
          Length = 8050

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 254 cgagcgcggcgcggagggcctc 275
           ||||||||||||||||||||||
Sbjct: 328 cgagcgcggcgcggagggcctc 349

>gb|U87804.2|CCU87804 Caulobacter crescentus 50 kDa protein (ogt) gene, partial cds; and
           GidA (gidA), GidB (gidB), ParA (parA), and ParB (parB)
           genes, complete cds
          Length = 5787

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 254 cgagcgcggcgcggagggcctc 275
           ||||||||||||||||||||||
Sbjct: 751 cgagcgcggcgcggagggcctc 730

>ref|XM_594248.2| PREDICTED: Bos taurus similar to CG2446-PC, isoform C (LOC516108),
           mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 230 gagccgggtgcaggagcgtgc 250
           |||||||||||||||||||||
Sbjct: 547 gagccgggtgcaggagcgtgc 567

>emb|AL138928.7| Human DNA sequence from clone RP11-197C12 on chromosome 1, complete
             sequence
          Length = 76294

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 54    cataagttattggagcaacttattt 78
             ||||| |||||||||||||||||||
Sbjct: 10563 cataaattattggagcaacttattt 10539

>ref|NM_188790.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccgccgtgacgacgcggccg 315
           ||||||||||||||||||||
Sbjct: 691 ccgccgtgacgacgcggccg 672

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      tacatttttcataagttatt 64
               ||||||||||||||||||||
Sbjct: 2711988 tacatttttcataagttatt 2712007

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     ccgagcgcggcgcggagggc 272
               ||||||||||||||||||||
Sbjct: 2527750 ccgagcgcggcgcggagggc 2527769

>ref|XM_752403.1| Ustilago maydis 521 hypothetical protein (UM01349.1) partial mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  agccgggtgcaggagcgtgc 250
            ||||||||||||||||||||
Sbjct: 1634 agccgggtgcaggagcgtgc 1615

>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23,
             complete sequence
          Length = 178472

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ggtacagtacatttttcata 57
             ||||||||||||||||||||
Sbjct: 19431 ggtacagtacatttttcata 19450

>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence
          Length = 192806

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    cacacagccaatcacaccacaccc 127
              ||||||||||| ||||||||||||
Sbjct: 145724 cacacagccaaccacaccacaccc 145747

>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ccgccgtgacgacgcggccg 315
              ||||||||||||||||||||
Sbjct: 159397 ccgccgtgacgacgcggccg 159416

>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcatgtattcttgcaatccc 36
              ||||||||||||||||||||
Sbjct: 148868 tcatgtattcttgcaatccc 148887

>gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, complete sequence
          Length = 171686

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    acccaactgaagtttcaggg 230
              ||||||||||||||||||||
Sbjct: 101988 acccaactgaagtttcaggg 101969

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      tacatttttcataagttatt 64
               ||||||||||||||||||||
Sbjct: 2734428 tacatttttcataagttatt 2734447

>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173920

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tcatgtattcttgcaatccc 36
             ||||||||||||||||||||
Sbjct: 19815 tcatgtattcttgcaatccc 19834

>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192046

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tttttcataagttattggag 68
              ||||||||||||||||||||
Sbjct: 117100 tttttcataagttattggag 117119

>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
            biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 251  tgccgagcgcggcgcggagggcctccgc 278
            ||||||||||||||| ||||||| ||||
Sbjct: 2489 tgccgagcgcggcgccgagggccgccgc 2462

>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ccgagcgcggcgcggagggc 272
              ||||||||||||||||||||
Sbjct: 142344 ccgagcgcggcgcggagggc 142325

>gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complete sequence
          Length = 143364

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    acccaactgaagtttcaggg 230
              ||||||||||||||||||||
Sbjct: 123483 acccaactgaagtttcaggg 123464

>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence
          Length = 188458

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tttttcataagttattggag 68
             ||||||||||||||||||||
Sbjct: 29143 tttttcataagttattggag 29124

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     ccgagcgcggcgcggagggc 272
               ||||||||||||||||||||
Sbjct: 2527860 ccgagcgcggcgcggagggc 2527879

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 296     ccgccgtgacgacgcggccg 315
               ||||||||||||||||||||
Sbjct: 8195276 ccgccgtgacgacgcggccg 8195295

>gb|AC097472.2| Homo sapiens BAC clone RP11-75M18 from 4, complete sequence
          Length = 146479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tttttcataagttattggag 68
             ||||||||||||||||||||
Sbjct: 68483 tttttcataagttattggag 68502

>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
              complete sequence
          Length = 106057

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ccgagcgcggcgcggagggc 272
              ||||||||||||||||||||
Sbjct: 100246 ccgagcgcggcgcggagggc 100265

>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ccgccgtgacgacgcggccg 315
              ||||||||||||||||||||
Sbjct: 112994 ccgccgtgacgacgcggccg 113013

>gb|AE005110.1| Halobacterium sp. NRC-1 section 141 of 170 of the complete genome
          Length = 11525

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  gccgagcgcggcgcggaggg 271
            ||||||||||||||||||||
Sbjct: 7120 gccgagcgcggcgcggaggg 7139

>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence
          Length = 157613

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tttttcataagttattggag 68
              ||||||||||||||||||||
Sbjct: 109405 tttttcataagttattggag 109386

>dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G12, full
           insert sequence
          Length = 893

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ccgccgtgacgacgcggccg 315
           ||||||||||||||||||||
Sbjct: 700 ccgccgtgacgacgcggccg 681

>dbj|AK065520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026K01, full
           insert sequence
          Length = 2401

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ccgagcgcggcgcggagggc 272
           ||||||||||||||||||||
Sbjct: 269 ccgagcgcggcgcggagggc 250

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      tacatttttcataagttatt 64
               ||||||||||||||||||||
Sbjct: 2751992 tacatttttcataagttatt 2752011

>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 104913

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tttttcataagttattggag 68
             ||||||||||||||||||||
Sbjct: 36201 tttttcataagttattggag 36182


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,520,181
Number of Sequences: 3902068
Number of extensions: 2520181
Number of successful extensions: 49269
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49087
Number of HSP's gapped (non-prelim): 178
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)