ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast03f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194195.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.094
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
3dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.094
4ref|XM_481411.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
5ref|XM_481406.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
6ref|XM_477718.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
7gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
8gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, com... 42 1.5
9gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Canc... 42 1.5
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11gb|AC154536.2| Mus musculus BAC clone RP23-449K2 from chromosome... 42 1.5
12emb|BX470229.4| Zebrafish DNA sequence from clone DKEY-193B15 in... 42 1.5
13dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AK107112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
17dbj|AK071522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
18gb|AC110555.20| Mus musculus chromosome 3, clone RP23-250B22, co... 42 1.5
19gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 m... 40 5.8
20ref|NM_124022.1| Arabidopsis thaliana ATP binding / nucleoside-t... 40 5.8
21ref|NM_124021.2| Arabidopsis thaliana ATP binding / nucleoside-t... 40 5.8
22gb|AC122007.3| Mus musculus chromosome 5 clone RP24-344D14, comp... 40 5.8
23ref|XM_456468.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.8
24gb|DQ413682.1| Staphylococcus aureus strain H831 SA0117 gene, pa... 40 5.8
25gb|DQ413681.1| Staphylococcus aureus strain H783 SA0117 gene, pa... 40 5.8
26gb|DQ413680.1| Staphylococcus aureus strain H707 SA0117 gene, pa... 40 5.8
27gb|DQ413679.1| Staphylococcus aureus strain H591 SA0117 gene, pa... 40 5.8
28gb|DQ413678.1| Staphylococcus aureus strain H560 SA0117 gene, pa... 40 5.8
29gb|DQ413677.1| Staphylococcus aureus strain H512 SA0117 gene, pa... 40 5.8
30gb|DQ413676.1| Staphylococcus aureus strain H466 SA0117 gene, pa... 40 5.8
31gb|DQ413675.1| Staphylococcus aureus strain H417 SA0117 gene, pa... 40 5.8
32gb|DQ413674.1| Staphylococcus aureus strain H402 SA0117 gene, pa... 40 5.8
33gb|DQ413673.1| Staphylococcus aureus strain H295 SA0117 gene, pa... 40 5.8
34gb|DQ413672.1| Staphylococcus aureus strain H19 SA0117 gene, par... 40 5.8
35gb|DQ413671.1| Staphylococcus aureus strain H116 SA0117 gene, pa... 40 5.8
36gb|DQ413670.1| Staphylococcus aureus strain EMRSA9 SA0117 gene, ... 40 5.8
37gb|DQ413669.1| Staphylococcus aureus strain EMRSA4 SA0117 gene, ... 40 5.8
38gb|DQ413668.1| Staphylococcus aureus strain EMRSA3 SA0117 gene, ... 40 5.8
39gb|DQ413666.1| Staphylococcus aureus strain D547 SA0117 gene, pa... 40 5.8
40gb|DQ413665.1| Staphylococcus aureus strain D535 SA0117 gene, pa... 40 5.8
41gb|DQ413664.1| Staphylococcus aureus strain D470 SA0117 gene, pa... 40 5.8
42gb|DQ413663.1| Staphylococcus aureus strain D456 SA0117 gene, pa... 40 5.8
43gb|DQ413662.1| Staphylococcus aureus strain D365 SA0117 gene, pa... 40 5.8
44gb|DQ413661.1| Staphylococcus aureus strain D274 SA0117 gene, pa... 40 5.8
45gb|DQ413660.1| Staphylococcus aureus strain D22 SA0117 gene, par... 40 5.8
46gb|DQ413659.1| Staphylococcus aureus strain D17 SA0117 gene, par... 40 5.8
47gb|DQ413658.1| Staphylococcus aureus strain C720 SA0117 gene, pa... 40 5.8
48gb|DQ413657.1| Staphylococcus aureus strain C640 SA0117 gene, pa... 40 5.8
49gb|DQ413656.1| Staphylococcus aureus strain C437 SA0117 gene, pa... 40 5.8
50gb|DQ413655.1| Staphylococcus aureus strain C2 SA0117 gene, part... 40 5.8
51gb|DQ413654.1| Staphylococcus aureus strain C101 SA0117 gene, pa... 40 5.8
52gb|AY251022.1| Staphylococcus aureus sir and sbn operons, comple... 40 5.8
53gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 5.8
54emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 5.8
55emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 5.8
56emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chr... 40 5.8
57dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 5.8
58gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 5.8
59gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 5.8
60gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 5.8
61gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, comp... 40 5.8
62dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 5.8
63dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 5.8
64dbj|AB019223.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.8
65gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 m... 40 5.8
66emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 5.8
67gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone ... 40 5.8
68emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 5.8 
>ref|NM_194195.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 945

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 397 agtgtagaagctcatgtagggcatgac 423
           ||||||||||||||||||||| |||||
Sbjct: 900 agtgtagaagctcatgtagggaatgac 874
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 397     agtgtagaagctcatgtagggcatgac 423
               ||||||||||||||||||||| |||||
Sbjct: 1092714 agtgtagaagctcatgtagggaatgac 1092740



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 397      agtgtagaagctcatgtaggg 417
                |||||||||||||||||||||
Sbjct: 13460984 agtgtagaagctcatgtaggg 13461004
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>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022B05
          Length = 151317

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 397   agtgtagaagctcatgtagggcatgac 423
             ||||||||||||||||||||| |||||
Sbjct: 90302 agtgtagaagctcatgtagggaatgac 90328
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>ref|XM_481411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1170

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  agtgtagaagctcatgtaggg 417
            |||||||||||||||||||||
Sbjct: 1071 agtgtagaagctcatgtaggg 1051
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>ref|XM_481406.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 397 agtgtagaagctcatgtaggg 417
           |||||||||||||||||||||
Sbjct: 576 agtgtagaagctcatgtaggg 556
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>ref|XM_477718.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1531

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  agtgtagaagctcatgtaggg 417
            |||||||||||||||||||||
Sbjct: 1215 agtgtagaagctcatgtaggg 1195
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
              complete sequence
          Length = 158749

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 397    agtgtagaagctcatgtaggg 417
              |||||||||||||||||||||
Sbjct: 127092 agtgtagaagctcatgtaggg 127112



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   agtgtagaagctcatgtaggg 417
             |||||||||||||||||||||
Sbjct: 95687 agtgtagaagctcatgtaggg 95667
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>gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, complete sequence
          Length = 215166

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 285    ttccagtgcagaaaacgtgaaccca 309
              |||||||||||||||| ||||||||
Sbjct: 193144 ttccagtgcagaaaacttgaaccca 193120
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>gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 203847

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 201   caaatagaaaatatagtgcat 221
             |||||||||||||||||||||
Sbjct: 73740 caaatagaaaatatagtgcat 73760
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 397      agtgtagaagctcatgtaggg 417
                |||||||||||||||||||||
Sbjct: 12298144 agtgtagaagctcatgtaggg 12298164



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 397      agtgtagaagctcatgtaggg 417
                |||||||||||||||||||||
Sbjct: 12266739 agtgtagaagctcatgtaggg 12266719
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>gb|AC154536.2| Mus musculus BAC clone RP23-449K2 from chromosome 17, complete sequence
          Length = 178521

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     ccaatccacaaaaccatcaac 116
              |||||||||||||||||||||
Sbjct: 126638 ccaatccacaaaaccatcaac 126618
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>emb|BX470229.4| Zebrafish DNA sequence from clone DKEY-193B15 in linkage group 2,
              complete sequence
          Length = 241018

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     tgaattctcaaagacaataac 54
              |||||||||||||||||||||
Sbjct: 142469 tgaattctcaaagacaataac 142489
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>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1123E10
          Length = 134641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 397   agtgtagaagctcatgtaggg 417
             |||||||||||||||||||||
Sbjct: 40667 agtgtagaagctcatgtaggg 40687
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>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0063H21
          Length = 188058

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 397    agtgtagaagctcatgtaggg 417
              |||||||||||||||||||||
Sbjct: 171636 agtgtagaagctcatgtaggg 171656



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 397    agtgtagaagctcatgtaggg 417
              |||||||||||||||||||||
Sbjct: 140231 agtgtagaagctcatgtaggg 140211
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 397   agtgtagaagctcatgtaggg 417
             |||||||||||||||||||||
Sbjct: 56793 agtgtagaagctcatgtaggg 56813



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   agtgtagaagctcatgtaggg 417
             |||||||||||||||||||||
Sbjct: 25388 agtgtagaagctcatgtaggg 25368
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>dbj|AK107112.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-123-A07, full
            insert sequence
          Length = 2287

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  agtgtagaagctcatgtaggg 417
            |||||||||||||||||||||
Sbjct: 1357 agtgtagaagctcatgtaggg 1337
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>dbj|AK071522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N14, full
            insert sequence
          Length = 1531

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  agtgtagaagctcatgtaggg 417
            |||||||||||||||||||||
Sbjct: 1215 agtgtagaagctcatgtaggg 1195
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>gb|AC110555.20| Mus musculus chromosome 3, clone RP23-250B22, complete sequence
          Length = 172885

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 285  ttccagtgcagaaaacgtgaaccca 309
            |||||||||||||||| ||||||||
Sbjct: 3004 ttccagtgcagaaaacttgaaccca 2980
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>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete
            sequence
          Length = 208029

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  ccatgctccagtgtagaagc 407
            ||||||||||||||||||||
Sbjct: 3664 ccatgctccagtgtagaagc 3645
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>ref|NM_124022.1| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
            nucleotide binding / transmembrane receptor AT5G46520
            mRNA, complete cds
          Length = 3897

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    atttgttactgcagaaatct 25
            ||||||||||||||||||||
Sbjct: 2521 atttgttactgcagaaatct 2540
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>ref|NM_124021.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
            nucleotide binding / transmembrane receptor AT5G46510
            mRNA, complete cds
          Length = 4708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    atttgttactgcagaaatct 25
            ||||||||||||||||||||
Sbjct: 2404 atttgttactgcagaaatct 2423
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>gb|AC122007.3| Mus musculus chromosome 5 clone RP24-344D14, complete sequence
          Length = 129748

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   acgaacaaacaaactcaagt 186
             ||||||||||||||||||||
Sbjct: 89510 acgaacaaacaaactcaagt 89529
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>ref|XM_456468.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A03355g)
            partial mRNA
          Length = 2679

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 361  agcttcatcagatgctttca 380
            ||||||||||||||||||||
Sbjct: 1977 agcttcatcagatgctttca 1958
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>gb|DQ413682.1| Staphylococcus aureus strain H831 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413681.1| Staphylococcus aureus strain H783 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413680.1| Staphylococcus aureus strain H707 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413679.1| Staphylococcus aureus strain H591 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413678.1| Staphylococcus aureus strain H560 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413677.1| Staphylococcus aureus strain H512 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413676.1| Staphylococcus aureus strain H466 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413675.1| Staphylococcus aureus strain H417 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413674.1| Staphylococcus aureus strain H402 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413673.1| Staphylococcus aureus strain H295 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413672.1| Staphylococcus aureus strain H19 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413671.1| Staphylococcus aureus strain H116 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413670.1| Staphylococcus aureus strain EMRSA9 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413669.1| Staphylococcus aureus strain EMRSA4 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413668.1| Staphylococcus aureus strain EMRSA3 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413666.1| Staphylococcus aureus strain D547 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413665.1| Staphylococcus aureus strain D535 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413664.1| Staphylococcus aureus strain D470 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413663.1| Staphylococcus aureus strain D456 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413662.1| Staphylococcus aureus strain D365 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413661.1| Staphylococcus aureus strain D274 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413660.1| Staphylococcus aureus strain D22 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413659.1| Staphylococcus aureus strain D17 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413658.1| Staphylococcus aureus strain C720 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413657.1| Staphylococcus aureus strain C640 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413656.1| Staphylococcus aureus strain C437 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413655.1| Staphylococcus aureus strain C2 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|DQ413654.1| Staphylococcus aureus strain C101 SA0117 gene, partial sequence
          Length = 435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aaacaaactcaagtttatgg 192
           ||||||||||||||||||||
Sbjct: 211 aaacaaactcaagtttatgg 230
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>gb|AY251022.1| Staphylococcus aureus sir and sbn operons, complete sequence
          Length = 14563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaacaaactcaagtttatgg 192
             ||||||||||||||||||||
Sbjct: 11096 aaacaaactcaagtttatgg 11115
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     gccaatgacggaggccaaga 87
              ||||||||||||||||||||
Sbjct: 714397 gccaatgacggaggccaaga 714378
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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    agcttcatcagatgctttca 380
              ||||||||||||||||||||
Sbjct: 248297 agcttcatcagatgctttca 248278
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 112234 aaacaaactcaagtttatgg 112253
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>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains the
             Adcy1 gene for adenylate cyclase 1, a novel gene and a CpG
             island, complete sequence
          Length = 189132

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   aaaatatagtgcatccaccc 227
             ||||||||||||||||||||
Sbjct: 17716 aaaatatagtgcatccaccc 17697
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 136483 aaacaaactcaagtttatgg 136502
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 121411 aaacaaactcaagtttatgg 121430
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaacaaactcaagtttatgg 192
             ||||||||||||||||||||
Sbjct: 87500 aaacaaactcaagtttatgg 87519
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 142214 aaacaaactcaagtttatgg 142233
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>gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, complete sequence
          Length = 172833

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 139    cagtcagcttgagctacactcacctcgg 166
              |||||||||| ||| |||||||||||||
Sbjct: 108784 cagtcagcttcagcaacactcacctcgg 108811
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 113528 aaacaaactcaagtttatgg 113547
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 136522 aaacaaactcaagtttatgg 136541
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>dbj|AB019223.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11I1
          Length = 51529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     atttgttactgcagaaatct 25
             ||||||||||||||||||||
Sbjct: 42387 atttgttactgcagaaatct 42406



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     atttgttactgcagaaatct 25
             ||||||||||||||||||||
Sbjct: 35001 atttgttactgcagaaatct 35020
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>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence
          Length = 187696

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    ccatgctccagtgtagaagc 407
              ||||||||||||||||||||
Sbjct: 122717 ccatgctccagtgtagaagc 122736
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aaacaaactcaagtttatgg 192
              ||||||||||||||||||||
Sbjct: 137899 aaacaaactcaagtttatgg 137918
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>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete
              sequence
          Length = 205343

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    ccatgctccagtgtagaagc 407
              ||||||||||||||||||||
Sbjct: 193743 ccatgctccagtgtagaagc 193724
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaacaaactcaagtttatgg 192
             ||||||||||||||||||||
Sbjct: 79517 aaacaaactcaagtttatgg 79536


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,777,880
Number of Sequences: 3902068
Number of extensions: 4777880
Number of successful extensions: 84668
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84440
Number of HSP's gapped (non-prelim): 228
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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