| Clone Name | rbast03e06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| ||||||||||||| Sbjct: 206708 agcagcagcaccaccaccaccagcagcagcagcag 206742 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||| | |||||||||||| Sbjct: 206860 cagcagcaccaccaccagcagcagcagcagca 206891 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||||| ||| ||||| Sbjct: 206882 agcagcagcaccaccaccaccagcaccagca 206912 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||| ||||| |||||||||| ||||||||||||| Sbjct: 206855 agcaccagcagcaccaccaccagcagcagcagcag 206889 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| ||| || |||||| Sbjct: 206810 agcagcagcaccaccaccaccagcaccaccagcag 206844 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||| || |||| |||||||||||| Sbjct: 206788 cagcagcaccagcagcaccagcagcagcagca 206819
>gb|AF461340.1| Drosophila birchii hunchback (hb) gene, partial cds Length = 492 Score = 60.0 bits (30), Expect = 5e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||||||| |||||||||||| Sbjct: 80 agcagcagcaccaccaccaccagcagcagcagca 113 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||||| |||||||||||| Sbjct: 75 caagcagcagcagcaccaccaccaccagcagcagcag 111 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||| ||||||||||| | ||||||||| |||| Sbjct: 83 agcagcaccaccaccaccagcagcagcagcatcagt 118
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||||||||| Sbjct: 28805 cagcagcaccaccaccaccagcagcagcagcag 28773 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 28804 agcagcaccaccaccaccagcagcagcagcagcag 28770
>ref|NM_079224.3| Drosophila melanogaster ventral veins lacking CG10037-RA (vvl), mRNA Length = 3383 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||||||||| Sbjct: 2659 cagcagcaccaccaccaccagcagcagcagcag 2691 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 2660 agcagcaccaccaccaccagcagcagcagcagcag 2694
>gb|BT003517.1| Drosophila melanogaster RE27192 full insert cDNA Length = 4393 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||||||||| Sbjct: 2658 cagcagcaccaccaccaccagcagcagcagcag 2690 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 2659 agcagcaccaccaccaccagcagcagcagcagcag 2693
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||||||||| Sbjct: 143168 cagcagcaccaccaccaccagcagcagcagcag 143200 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 143169 agcagcaccaccaccaccagcagcagcagcagcag 143203
>gb|M81959.1|DROPOUC D.melanogaster POU domain protein (Cfla) mRNA, complete cds Length = 2834 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||||||||| Sbjct: 2110 cagcagcaccaccaccaccagcagcagcagcag 2142 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 2111 agcagcaccaccaccaccagcagcagcagcagcag 2145
>ref|XM_960649.1| Neurospora crassa OR74A hypothetical protein (NCU00602.1) partial mRNA Length = 1869 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||||||||||||| |||||||||| Sbjct: 934 agcagcagcaccaccaccaccagcagcagcag 965 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcagta 324 ||||||||| |||||||||| |||||||||||||| Sbjct: 932 gcagcagcagcaccaccaccaccagcagcagcagta 967
>ref|XM_324781.1| Neurospora crassa OR74A hypothetical protein (NCU00602.1) partial mRNA Length = 1869 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||||||||||||| |||||||||| Sbjct: 934 agcagcagcaccaccaccaccagcagcagcag 965 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcagta 324 ||||||||| |||||||||| |||||||||||||| Sbjct: 932 gcagcagcagcaccaccaccaccagcagcagcagta 967
>emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig B22I21 Length = 124321 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||||||||||||| |||||||||| Sbjct: 19844 agcagcagcaccaccaccaccagcagcagcag 19813 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 289 gcagcagcaccaccaccaccggcagcagcagcagta 324 ||||||||| |||||||||| |||||||||||||| Sbjct: 19846 gcagcagcagcaccaccaccaccagcagcagcagta 19811
>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176521 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||| |||||||||||||| Sbjct: 93608 agcagcagcaccatcaccaccagcagcagcagcagt 93643
>gb|AF461342.1| Drosophila lini hunchback (hb) gene, partial cds Length = 492 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||||| | ||||||||||||| Sbjct: 76 aagcagcagcaccaccaccaacagcagcagcagcag 111
>ref|NM_167990.1| Drosophila melanogaster BTB-protein-VII CG11494-RA, transcript variant A (BtbVII), mRNA Length = 3884 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||| |||||||||||||| Sbjct: 934 agcagcagcaccatcaccaccagcagcagcagcagt 969
>ref|NM_079172.2| Drosophila melanogaster BTB-protein-VII CG11494-RB, transcript variant B (BtbVII), mRNA Length = 3789 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||| |||||||||||||| Sbjct: 839 agcagcagcaccatcaccaccagcagcagcagcagt 874
>gb|AY051895.1| Drosophila melanogaster LD38452 full length cDNA Length = 3310 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||| |||||||||||||| Sbjct: 934 agcagcagcaccatcaccaccagcagcagcagcagt 969
>emb|AJ893533.1| Oryctolagus cuniculus partial ar gene for androgen receptor, exon 1 Length = 1425 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||||||||||||| |||||||||| Sbjct: 491 agcagcagcaccaccaccaccagcagcagcag 522 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||| |||||||||| |||||||||||| Sbjct: 490 cagcagcagcaccaccaccaccagcagcagcag 522
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete sequence Length = 297894 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||| |||||||||||||| Sbjct: 79730 agcagcagcaccatcaccaccagcagcagcagcagt 79765
>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete sequence Length = 191162 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 144316 agcagcagcatcaccaccaccagcagcagcagcag 144282 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 144268 agcagcagcatcaccaccaccagcagcagcagcag 144234 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 144163 agcagcagcatcaccaccaccagcagcagcagcag 144129 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 144313 agcagcatcaccaccaccagcagcagcagcagcag 144279 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 144265 agcagcatcaccaccaccagcagcagcagcagcag 144231 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 144160 agcagcatcaccaccaccagcagcagcagcagcag 144126 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 144004 agcagcagcagcatcaccaccagcagcagcagcag 143970 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||| | |||||||||||| Sbjct: 144001 agcagcagcatcaccaccagcagcagcagcagca 143968 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||| ||||||||||||| Sbjct: 144395 caccaccaccagcagcagcagcag 144372
>ref|XM_973340.1| PREDICTED: Mus musculus hypothetical protein LOC669145 (LOC669145), mRNA Length = 498 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 133 agcagcagcatcaccaccaccagcagcagcagcag 167 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 346 agcagcagcagcatcaccaccagcagcagcagcag 380 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| |||||||| |||| ||||||||||||| Sbjct: 238 agcagcaccaccaccatcaccagcagcagcagcag 272 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| | |||||||||||| Sbjct: 235 agcagcagcaccaccaccatcaccagcagcagcag 269 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 136 agcagcatcaccaccaccagcagcagcagcagcag 170 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||| | |||||||||||| Sbjct: 349 agcagcagcatcaccaccagcagcagcagcagca 382 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||| ||||||||||||| Sbjct: 57 caccaccaccagcagcagcagcag 80
>ref|XM_989023.1| PREDICTED: Mus musculus hypothetical protein LOC676314 (LOC676314), mRNA Length = 618 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 278 agcagcagcatcaccaccaccagcagcagcagcag 312 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||||| ||||||||||||| Sbjct: 233 agcagcatcaccaccaccaccagcagcagcagcag 267 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 281 agcagcatcaccaccaccagcagcagcagcagcag 315 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| |||||||||||| Sbjct: 230 agcagcagcatcaccaccaccaccagcagcagcag 264
>ref|XM_985275.1| PREDICTED: Mus musculus hypothetical protein LOC666666 (LOC666666), mRNA Length = 630 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 383 agcagcagcatcaccaccaccagcagcagcagcag 417 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 278 agcagcagcatcaccaccaccagcagcagcagcag 312 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 230 agcagcagcatcaccaccaccagcagcagcagcag 264 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 281 agcagcatcaccaccaccagcagcagcagcagcag 315 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 233 agcagcatcaccaccaccagcagcagcagcagcag 267 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||| ||||||||||| | |||||||||||| Sbjct: 386 agcagcatcaccaccaccagcagcagcagcagca 419
>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence Length = 190792 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 159291 agcagcagcatcaccaccaccagcagcagcagcag 159325 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 159186 agcagcagcatcaccaccaccagcagcagcagcag 159220 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 159138 agcagcagcatcaccaccaccagcagcagcagcag 159172 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 159450 agcagcagcagcatcaccaccagcagcagcagcag 159484 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 159294 agcagcatcaccaccaccagcagcagcagcagcag 159328 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 159189 agcagcatcaccaccaccagcagcagcagcagcag 159223 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||| | ||||||||||||| Sbjct: 159141 agcagcatcaccaccaccagcagcagcagcagcag 159175 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||| | |||||||||||| Sbjct: 159453 agcagcagcatcaccaccagcagcagcagcagca 159486 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||| ||||||||||||| Sbjct: 159059 caccaccaccagcagcagcagcag 159082
>gb|AC127294.4| Mus musculus BAC clone RP23-386L1 from chromosome 3, complete sequence Length = 212556 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||| |||||||||||||||| ||||||||||||| Sbjct: 43910 agcaccagcaccaccaccaccagcagcagcagcag 43876 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||| |||||||||||||| | ||||||||||||| Sbjct: 43775 agcaccagcaccaccaccagcagcagcagcagcag 43741 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 43949 agcagcagcaccaccaccacc 43929 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||| ||||||||||| | ||||||||||||| Sbjct: 43905 cagcaccaccaccaccagcagcagcagcagcag 43873 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 43820 agcagcagcaccaccaccacc 43800 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||| || |||||||||| ||||||||||||| Sbjct: 43776 cagcaccagcaccaccaccagcagcagcagcag 43744
>gb|AC026729.5| Homo sapiens chromosome 5 clone CTD-2288A4, complete sequence Length = 113066 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| | ||||||||||||| Sbjct: 40322 agcagcagcaccaccaccagcagcagcagcagcag 40356 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 40319 agcagcagcagcaccaccaccagcagcagcagcag 40353
>gb|AC079644.9|AC079644 Mus musculus 12 BAC RP23-174O6 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 204394 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||||| ||||||||| Sbjct: 83525 agcagcagcaccaccaccaccagcagcagca 83555 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||||| ||||||||||| Sbjct: 83522 agcagcagcagcaccaccaccaccagcagcagca 83555
>gb|AC008710.5| Homo sapiens chromosome 5 clone CTB-7E3, complete sequence Length = 132521 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| | ||||||||||||| Sbjct: 110938 agcagcagcaccaccaccagcagcagcagcagcag 110972 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||||| ||||||||||||| Sbjct: 110935 agcagcagcagcaccaccaccagcagcagcagcag 110969
>gb|DQ328983.1| Petromyzon marinus HMG box protein SoxE2 mRNA, complete cds Length = 3857 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||||| ||||||||| Sbjct: 1776 agcagcagcaccaccaccaccagcagcagca 1806 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 |||||||| |||||||||| ||||||||||| Sbjct: 1775 cagcagcagcaccaccaccaccagcagcagca 1806
>emb|AL928683.8| Mouse DNA sequence from clone RP23-78O17 on chromosome 2, complete sequence Length = 142772 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| |||||||||||| Sbjct: 136395 agcagcagcaccaccaccaccaccagcagcagcag 136361 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||| ||||||||||||| ||||||||||||| Sbjct: 136392 agcagcaccaccaccaccaccagcagcagcagcag 136358
>ref|XM_323629.1| Neurospora crassa OR74A hypothetical protein (NCU04290.1) partial mRNA Length = 2148 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||| ||||||| |||||||||||| Sbjct: 282 agcagcagcaccagcaccaccagcagcagcagca 249
>ref|XM_952316.1| Neurospora crassa OR74A hypothetical protein (NCU07184.1) partial mRNA Length = 591 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| | ||||||||||||| Sbjct: 399 gcagcagcaccaccaccagcagcagcagcagcag 432
>ref|XM_955987.1| Neurospora crassa OR74A hypothetical protein (NCU04290.1) partial mRNA Length = 2148 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||| ||||||| |||||||||||| Sbjct: 282 agcagcagcaccagcaccaccagcagcagcagca 249
>ref|XM_327469.1| Neurospora crassa OR74A hypothetical protein (NCU07184.1) partial mRNA Length = 591 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| | ||||||||||||| Sbjct: 399 gcagcagcaccaccaccagcagcagcagcagcag 432
>ref|XM_980983.1| PREDICTED: Mus musculus hypothetical protein LOC670377 (LOC670377), mRNA Length = 1740 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||||| |||||||||||| Sbjct: 748 agcagcagcagcaccaccaccagcagcagcagca 781
>ref|XM_979476.1| PREDICTED: Mus musculus hypothetical protein LOC665791 (LOC665791), mRNA Length = 585 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||||| |||||||||||| Sbjct: 505 agcagcagcagcaccaccaccagcagcagcagca 538
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| | ||||||||||||| Sbjct: 116515 gcagcagcaccaccaccagcagcagcagcagcag 116548
>emb|AL451109.1|NCB11A5 Neurospora crassa DNA linkage group V BAC clone B11A5 Length = 74109 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||| ||||||| |||||||||||| Sbjct: 30796 agcagcagcaccagcaccaccagcagcagcagca 30829
>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the 5' end of the Kcnip1 gene for Kv channel-interacting protein 1, the Kcnmb1 gene for potassium large conductance calcium-activated channel, subfamily M, beta member 1 and the 3' end of a novel gene, complete sequence Length = 173783 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 190 tcagacagacagacagacatggggat 215 |||||||||||||||||||||||||| Sbjct: 97141 tcagacagacagacagacatggggat 97116
>ref|NM_136646.1| Drosophila melanogaster CG13953-RA (CG13953), mRNA Length = 765 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||||||| ||||||||||||| Sbjct: 513 gcagcagcaacaccaccacctgcagcagcagcag 546 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 563 agcagcagcaccaccaccacc 583
>gb|AC007086.10|AC007086 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone BACR14J24, complete sequence Length = 186241 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||||||| ||||||||||||| Sbjct: 109305 gcagcagcaacaccaccacctgcagcagcagcag 109272 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 109255 agcagcagcaccaccaccacc 109235
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||||| |||||||||||| Sbjct: 109364 agcagcagcagcaccaccaccagcagcagcagca 109397
>gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17 of 73 of the complete sequence Length = 297107 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||||||| ||||||||||||| Sbjct: 149846 gcagcagcaacaccaccacctgcagcagcagcag 149879 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 149896 agcagcagcaccaccaccacc 149916 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcag 319 |||||||||||||| |||||||||| Sbjct: 11403 gcaccaccaccaccagcagcagcag 11379
>gb|AY495672.1| Sparus aurata lipoprotein lipase mRNA, complete cds Length = 1669 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagta 324 ||||||||||||| ||||||||||||||| Sbjct: 98 caccaccaccaccagcagcagcagcagta 126
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| |||||||||||| Sbjct: 197592 cagcaccaccaccaccagcagcagcagca 197564 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 197657 agcagcagcaccaccaccacc 197637 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 ||||||| |||||||| |||||||||||| Sbjct: 197445 cagcacctccaccaccagcagcagcagca 197417
>gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-108D4, complete sequence Length = 204935 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| |||||||||||| Sbjct: 19240 cagcaccaccaccaccagcagcagcagca 19212 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 19305 agcagcagcaccaccaccacc 19285 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 ||||||| |||||||| |||||||||||| Sbjct: 19093 cagcacctccaccaccagcagcagcagca 19065
>gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosome 14, complete sequence Length = 170642 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||| ||||||||| Sbjct: 78969 cagcagcaccaccaccaccagcagcagca 78997
>gb|AC130713.4| Mus musculus BAC clone RP23-316K10 from chromosome 15, complete sequence Length = 192020 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcag 319 |||||||||||||| ||||||| |||||||||| Sbjct: 174692 aagcagcagcaccatcaccaccagcagcagcag 174724
>gb|AC115890.8| Mus musculus chromosome 6, clone RP24-421B23, complete sequence Length = 191709 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| |||||||||||| Sbjct: 107205 cagcaccaccaccaccagcagcagcagca 107177 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 107270 agcagcagcaccaccaccacc 107250 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagca 321 ||||||| |||||||| |||||||||||| Sbjct: 107058 cagcacctccaccaccagcagcagcagca 107030
>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence Length = 224704 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 287 aagcagcagcaccaccaccaccggcagcagcag 319 |||||||||||||| ||||||| |||||||||| Sbjct: 146409 aagcagcagcaccatcaccaccagcagcagcag 146377
>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence Length = 139801 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagc 320 |||||||||||||| |||||| ||||||||||| Sbjct: 126234 agcagcagcaccactaccaccagcagcagcagc 126266
>gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, complete sequence Length = 186588 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagc 320 |||||||||||||| |||||| ||||||||||| Sbjct: 23072 agcagcagcaccactaccaccagcagcagcagc 23104
>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research Institute) complete sequence Length = 212568 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 289 gcagcagcaccaccaccaccggcagcagcagcagtat 325 ||||||||| || ||||||| |||||||||||||||| Sbjct: 30912 gcagcagcagcagcaccaccagcagcagcagcagtat 30876
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166352 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||| |||||||||| ||||||||||||| Sbjct: 110551 cagcagcaacaccaccaccagcagcagcagcag 110583 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||| ||||||||||| | |||||||||||| Sbjct: 110552 agcagcaacaccaccaccagcagcagcagcagca 110585
>gb|AF461353.1| Drosophila rufa hunchback (hb) gene, partial cds Length = 495 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||| | ||||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagcag 111 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| || | |||||||||||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcagca 113
>gb|AF461349.1| Drosophila kanapiae hunchback (hb) gene, partial cds Length = 486 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||||| | ||||||||| Sbjct: 75 caagcagcagcaccaccaccaacagcagcagca 107
>gb|AF461348.1| Drosophila biauraria hunchback (hb) gene, partial cds Length = 498 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||||| ||| ||||||||| Sbjct: 75 caagcagcagcagcaccaccaccagcaacagcagcag 111 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| | |||||||||||| Sbjct: 80 agcagcagcaccaccaccagcaacagcagcagcag 114
>gb|AF461346.1| Drosophila tsacasi hunchback (hb) gene, partial cds Length = 492 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 75 caagcagcagcaccaccaccagcagcaacagcagcag 111
>gb|AF461345.1| Drosophila triauraria hunchback (hb) gene, partial cds Length = 495 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||| | ||||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagcag 111 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| || | |||||||||||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcagca 113
>gb|AF461343.1| Drosophila quadraria hunchback (hb) gene, partial cds Length = 495 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||| | ||||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagcag 111 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| || | |||||||||||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcagca 113
>gb|AF461338.1| Drosophila auraria hunchback (hb) gene, partial cds Length = 495 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||| | ||||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagcag 111 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| || | |||||||||||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcagca 113
>gb|AF461337.1| Drosophila nikananu hunchback (hb) gene, partial cds Length = 492 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||| |||||||| | ||||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagcag 111 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||||||| || | |||||||||||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcagca 113
>gb|AF461336.1| Drosophila vulcana hunchback (hb) gene, partial cds Length = 492 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 75 caagcagcagcaccaccaccagcagcaacagcagcag 111
>gb|AF461332.1| Drosophila diplacantha hunchback (hb) gene, partial cds Length = 498 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 75 caagcagcagcaccaccaccagcagcaacagcagcag 111
>gb|AF461331.1| Drosophila bicornuta hunchback (hb) gene, partial cds Length = 501 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| || | ||||||||||||| Sbjct: 75 caagcagcagcaccaccagcagcagcagcagcagcag 111
>gb|AF461325.1| Drosophila greeni hunchback (hb) gene, partial cds Length = 501 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 75 caagcagcagcaccaccaccagcagcaacagcagcag 111
>ref|NM_167686.1| Drosophila melanogaster CG11940-RB, transcript variant B (CG11940), mRNA Length = 3726 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||| |||| ||||||||||||| Sbjct: 1159 cagcagcaccaccagcaccagcagcagcagcag 1191
>ref|NM_134519.1| Drosophila melanogaster CG11940-RA, transcript variant A (CG11940), mRNA Length = 4528 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||| |||| ||||||||||||| Sbjct: 1961 cagcagcaccaccagcaccagcagcagcagcag 1993
>gb|AY028456.1| Petromyzon marinus estrogen receptor mRNA, partial cds Length = 1662 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||| | ||||||||||||| Sbjct: 142 cagcagcaccaccaccagcagcagcagcagcag 174 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||| ||||| |||||||||| ||||||||||||| Sbjct: 137 agcatcagcagcaccaccaccagcagcagcagcag 171
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone BACR48P17, complete sequence Length = 176195 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||| |||| ||||||||||||| Sbjct: 116346 cagcagcaccaccagcaccagcagcagcagcag 116314
>gb|AF247362.1|AF247362 Petromyzon marinus Spi transcription factor mRNA, complete cds Length = 1272 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||| | ||||||||||||| Sbjct: 737 cagcagcaccaccaccagcagcagcagcagcag 769
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||| |||||||||| ||||||||||||| Sbjct: 15880 cagcagcaacaccaccaccagcagcagcagcag 15848 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 ||||||| ||||||||||| | |||||||||||| Sbjct: 15879 agcagcaacaccaccaccagcagcagcagcagca 15846
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete sequence Length = 207432 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||| |||| ||||||||||||| Sbjct: 136485 cagcagcaccaccagcaccagcagcagcagcag 136453
>gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complete sequence Length = 199276 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 191 cagacagacagacagacatggggat 215 ||||||||||||||||||||||||| Sbjct: 30376 cagacagacagacagacatggggat 30352
>ref|NM_189691.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 1102 gcaccaccgccaccggcagcagcagcag 1075
>ref|XM_466991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2325 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||| ||||||||| |||||||||| Sbjct: 202 agcagcagcacaaccaccaccagcagcagcag 233
>ref|XM_477056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||||||||||||||||| Sbjct: 511 caccaccaccggcagcagcagcag 534
>gb|BC016899.1| Mus musculus enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase, mRNA (cDNA clone MGC:19225 IMAGE:4241677), complete cds Length = 2993 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 2319 agcaccaccaccaccagcagcagcagca 2292
>gb|AC114990.8| Mus musculus chromosome 16, clone RP24-361F11, complete sequence Length = 179887 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 2772 agcaccaccaccaccagcagcagcagca 2799
>gb|AC134548.5| Mus musculus BAC clone RP24-258K6 from chromosome 15, complete sequence Length = 177331 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcag 319 |||||||||||||||||||||||| Sbjct: 24724 caccaccaccaccggcagcagcag 24747
>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete sequence Length = 127200 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| |||||| |||||| Sbjct: 31641 agcagcaccaccaccaccagcagcaccagcag 31672 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||| || |||| ||||||||||||| Sbjct: 32070 agcagcagcaccagcagcaccagcagcagcagcag 32104 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||| || |||| ||||||||||||| Sbjct: 31779 agcagcagcaccagcagcaccagcagcagcagcag 31813 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||| | ||| ||||||||| Sbjct: 31640 aagcagcaccaccaccaccagcagcaccagcagcag 31675
>gb|AC130214.4| Mus musculus BAC clone RP23-245B21 from chromosome 16, complete sequence Length = 216170 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 159256 agcaccaccaccaccagcagcagcagca 159283
>emb|AJ011864.1|HSA011864 Mus musculus mRNA for L-specific multifunctional beta-oxdiation protein, partial CDS Length = 1649 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 989 agcaccaccaccaccagcagcagcagca 962
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||||| |||||| |||||| Sbjct: 149951 agcagcaccaccaccaccagcagcaccagcag 149982 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||| || |||| ||||||||||||| Sbjct: 150380 agcagcagcaccagcagcaccagcagcagcagcag 150414 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||| || |||| ||||||||||||| Sbjct: 150089 agcagcagcaccagcagcaccagcagcagcagcag 150123 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||| | ||| ||||||||| Sbjct: 149950 aagcagcaccaccaccaccagcagcaccagcagcag 149985
>emb|BX006665.1|CNS08DB1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA11BA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||| ||||||||||||||| |||||||||| Sbjct: 414 agcagtagcaccaccaccaccagcagcagcag 383 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagta 324 |||||||| | |||||||||| |||||||||||||| Sbjct: 417 agcagcagtagcaccaccaccaccagcagcagcagta 381
>ref|NM_001031132.1| Gallus gallus similar to hypothetical protein FLJ23356 (LOC422491), mRNA Length = 3513 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||||| ||||||||||||| Sbjct: 279 agcagcaccgccaccaccagcagcagcagcag 248
>emb|AJ851801.1| Gallus gallus mRNA for hypothetical protein, clone 34j1 Length = 3513 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||||| ||||||||||||| Sbjct: 279 agcagcaccgccaccaccagcagcagcagcag 248
>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a novel gene (2810471M01Rik), the 5' end of the gene for a novel protein (E030025D05Rik) and a CpG island, complete sequence Length = 216627 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 |||||||| |||||||||| |||||||||||| Sbjct: 128868 cagcagcaacaccaccaccagcagcagcagca 128899
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||| | |||||||||||| Sbjct: 7366 cagcagcaccaccaccagcagcagcagcagca 7335 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagcag 322 ||||| |||||||||| ||||||||||||| Sbjct: 7366 cagcagcaccaccaccagcagcagcagcag 7337
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||| | |||||||||||| Sbjct: 111470 cagcagcaccaccaccagcagcagcagcagca 111439 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagcag 322 ||||| |||||||||| ||||||||||||| Sbjct: 111470 cagcagcaccaccaccagcagcagcagcag 111441
>gb|AF461352.1| Drosophila parvula hunchback (hb) gene, partial cds Length = 489 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||||||| | ||||||||||| Sbjct: 75 caagcagcagcaccaccaccagcaacagcagcagca 110
>gb|AF461347.1| Drosophila baimaii hunchback (hb) gene, partial cds Length = 495 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||| |||||||| | |||||||||||| Sbjct: 75 caagcagcagcagcaccaccaacagcagcagcagca 110
>gb|AF461333.1| Drosophila watanabei hunchback (hb) gene, partial cds Length = 489 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagca 321 |||||||||||| |||||||| | |||||||||||| Sbjct: 75 caagcagcagcagcaccaccagcagcagcagcagca 110 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 |||||||||||||||| || | ||||||||| |||| Sbjct: 80 agcagcagcaccaccagcagcagcagcagcatcagt 115 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 ||||||| || ||||||| ||||||||||||| Sbjct: 77 agcagcagcagcaccaccagcagcagcagcag 108
>ref|NM_132114.1| Drosophila melanogaster CG14442-RA (CG14442), mRNA Length = 4747 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||| | |||||||||||| Sbjct: 1972 cagcagcaccaccaccagcagcagcagcagca 2003 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 293 cagcaccaccaccaccggcagcagcagcag 322 ||||| |||||||||| ||||||||||||| Sbjct: 1972 cagcagcaccaccaccagcagcagcagcag 2001
>ref|NM_023737.2| Mus musculus enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase (Ehhadh), mRNA Length = 2993 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 2319 agcaccaccaccaccagcagcagcagca 2292
>gb|AF337050.1|AF337050 Mus musculus domesticus strain B6JEi.YSWR/J SRY transcription factor (Sry) gene, Sry-SWR/J allele, complete cds Length = 2306 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1434 caccaccaccaccagcagcagcagcagt 1461 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1894 accaccaccaccagcagcagcagcag 1919 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1896 caccaccaccagcagcagcagcagcagt 1923 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1575 caccaccaccaccaacagcagcagcagt 1602
>gb|AF337049.1|AF337049 Mus musculus domesticus strain B6JEi.YSJL/J SRY transcription factor (Sry) gene, Sry-SJL/J allele, complete cds Length = 2310 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1434 caccaccaccaccagcagcagcagcagt 1461 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1894 accaccaccaccagcagcagcagcag 1919 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1896 caccaccaccagcagcagcagcagcagt 1923 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1575 caccaccaccaccaacagcagcagcagt 1602
>gb|AF337048.1|AF337048 Mus musculus domesticus strain B6JEi.YST/bJ SRY transcription factor (Sry) gene, Sry-ST/bJ allele, complete cds Length = 2311 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1434 caccaccaccaccagcagcagcagcagt 1461 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1894 accaccaccaccagcagcagcagcag 1919 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1896 caccaccaccagcagcagcagcagcagt 1923 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1575 caccaccaccaccaacagcagcagcagt 1602
>gb|AF337047.1|AF337047 Mus musculus domesticus strain B6JEi.YMA/MyJ SRY transcription factor (Sry) gene, Sry-MA/MyJ allele, complete cds Length = 2332 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1447 caccaccaccaccagcagcagcagcagt 1474 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1907 accaccaccaccagcagcagcagcag 1932 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1909 caccaccaccagcagcagcagcagcagt 1936 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1588 caccaccaccaccaacagcagcagcagt 1615
>gb|AF337046.1|AF337046 Mus musculus domesticus strain B6JEi.YPL/J SRY transcription factor (Sry) gene, Sry-PL/J allele, complete cds Length = 2319 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1447 caccaccaccaccagcagcagcagcagt 1474 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1907 accaccaccaccagcagcagcagcag 1932 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1909 caccaccaccagcagcagcagcagcagt 1936 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1588 caccaccaccaccaacagcagcagcagt 1615
>gb|AF337045.1|AF337045 Mus musculus domesticus strain B6JEi.YRF/J SRY transcription factor (Sry) gene, Sry-RF/J allele, complete cds Length = 2319 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1447 caccaccaccaccagcagcagcagcagt 1474 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1907 accaccaccaccagcagcagcagcag 1932 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1909 caccaccaccagcagcagcagcagcagt 1936 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1588 caccaccaccaccaacagcagcagcagt 1615
>gb|AF337044.1|AF337044 Mus musculus domesticus strain WSB/Ei SRY transcription factor (Sry) gene, Sry-WSB/Ei allele, complete cds Length = 2331 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1447 caccaccaccaccagcagcagcagcagt 1474 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1907 accaccaccaccagcagcagcagcag 1932 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1909 caccaccaccagcagcagcagcagcagt 1936 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1588 caccaccaccaccaacagcagcagcagt 1615
>gb|AF337043.1|AF337043 Mus musculus domesticus strain LEWES SRY transcription factor (Sry) gene, Sry-LEWES allele, complete cds Length = 2298 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1447 caccaccaccaccagcagcagcagcagt 1474 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1907 accaccaccaccagcagcagcagcag 1932 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1909 caccaccaccagcagcagcagcagcagt 1936 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1588 caccaccaccaccaacagcagcagcagt 1615
>dbj|AK004867.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300002P22 product:PEROXISOMAL BIFUNCTIONAL ENZYME (PBE) (PBFE) [INCLUDES: ENOYL-COA HYDRATASE (EC 4.2.1.17); 3,2-TRANS-ENOYL-COA ISOMERASE (EC 5.3.3.8); 3-HYDROXYACYL-COA DEHYDROGENASE (EC 1.1.1.35)] homolog [Rattus norvegicus], full insert sequence Length = 2979 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 294 agcaccaccaccaccggcagcagcagca 321 ||||||||||||||| |||||||||||| Sbjct: 2316 agcaccaccaccaccagcagcagcagca 2289
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 14907923 caccaccaccaccagcagcagcagcagt 14907896 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccg 309 |||||||||||||||||||| Sbjct: 21215210 cagcagcaccaccaccaccg 21215191 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 ccaccaccaccggcagcagcagca 321 ||||||||||| |||||||||||| Sbjct: 14544231 ccaccaccaccagcagcagcagca 14544254
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||||||||||||||||| Sbjct: 5631623 caccaccaccggcagcagcagcag 5631646 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccg 309 |||||||||||||||||||||| Sbjct: 24903381 agcagcagcaccaccaccaccg 24903360 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||||||||| |||||||||||| Sbjct: 29062861 gcaccaccaccaccatcagcagcagcag 29062834 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagc 314 |||||||||||||||||||| Sbjct: 10669222 gcaccaccaccaccggcagc 10669203
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||| ||||||||| |||||||||| Sbjct: 25786080 agcagcagcacaaccaccaccagcagcagcag 25786111 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccg 309 |||||||||||||||||||||| Sbjct: 26529601 agcagcagcaccaccaccaccg 26529622 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 295 gcaccaccaccaccggcagcagcagc 320 |||||||||||||| ||||||||||| Sbjct: 18546259 gcaccaccaccaccagcagcagcagc 18546284 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 accaccaccaccggcagcagcagc 320 |||||||||||| ||||||||||| Sbjct: 17085283 accaccaccaccagcagcagcagc 17085260 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 atatgctccttctccatcaa 35 |||||||||||||||||||| Sbjct: 8178442 atatgctccttctccatcaa 8178423
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 5016595 gcaccaccgccaccggcagcagcagcag 5016568 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 41200686 agcagcagcaccaccaccacc 41200706 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 agcaccaccaccaccggcagcagc 317 ||||||||||||||| |||||||| Sbjct: 8698464 agcaccaccaccaccagcagcagc 8698487 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggc 311 ||||||||||| |||||||||||| Sbjct: 6222837 agcagcagcacgaccaccaccggc 6222814 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||| ||||| ||||||||||||||| ||||| Sbjct: 4852827 agcaccaccagcaccaccggcagcaggagcag 4852796 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||| ||||||||||||| Sbjct: 3884395 caccaccaccagcagcagcagcag 3884418
>gb|AC007083.11|AC007083 Drosophila melanogaster, chromosome 2L, region 33A-, BAC clone BACR43K24, complete sequence Length = 188067 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||||| ||| | |||||||||||||| Sbjct: 97011 agcagcagcaccaccgccagcagcagcagcagcagt 97046 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||| || |||||||| |||||||||||| Sbjct: 97004 aagcagcagcagcagcaccaccgccagcagcagcag 97039 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| ||||||| || ||||||||||||| Sbjct: 97008 agcagcagcagcaccaccgccagcagcagcagcag 97042
>dbj|AB208022.1| Mus musculus asic 1b mRNA for acid-sensing ion channel, complete cds Length = 1680 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcag 319 |||||||||||||||||||||||| Sbjct: 82 caccaccaccaccggcagcagcag 105
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 10033 gcaccaccgccaccggcagcagcagcag 10006
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 117048 gcaccaccgccaccggcagcagcagcag 117021
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 116262 caccaccaccaccagcagcagcagcagt 116235
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||| ||||||||| |||||||||| Sbjct: 32686 agcagcagcacaaccaccaccagcagcagcag 32717
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene) Length = 2095 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagca 315 ||||||||||||||||||||| |||||| Sbjct: 108 agcagcagcaccaccaccaccagcagca 81
>dbj|AK107005.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D05, full insert sequence Length = 1886 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 1133 gcaccaccgccaccggcagcagcagcag 1106
>dbj|AK099271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020E22, full insert sequence Length = 1412 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 1162 gcaccaccgccaccggcagcagcagcag 1135
>dbj|AK072124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F19, full insert sequence Length = 2325 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcag 319 ||||||||||| ||||||||| |||||||||| Sbjct: 202 agcagcagcacaaccaccaccagcagcagcag 233
>dbj|AK069948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035M20, full insert sequence Length = 1509 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 295 gcaccaccaccaccggcagcagcagcag 322 |||||||| ||||||||||||||||||| Sbjct: 1226 gcaccaccgccaccggcagcagcagcag 1199
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 299 caccaccaccggcagcagcagcag 322 |||||||||||||||||||||||| Sbjct: 93315 caccaccaccggcagcagcagcag 93338
>gb|AE003632.4| Drosophila melanogaster chromosome 2L, section 41 of 83 of the complete sequence Length = 244231 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||||| ||| | |||||||||||||| Sbjct: 44929 agcagcagcaccaccgccagcagcagcagcagcagt 44964 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||| || |||||||| |||||||||||| Sbjct: 44922 aagcagcagcagcagcaccaccgccagcagcagcag 44957 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| ||||||| || ||||||||||||| Sbjct: 44926 agcagcagcagcaccaccgccagcagcagcagcag 44960
>gb|U62542.1|DMU62542 Drosophila melanogaster dead ringer (dead ringer) mRNA, complete cds Length = 3696 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 |||||||||| |||||||| | |||||||||||||| Sbjct: 1638 agcagcagcatcaccaccagcagcagcagcagcagt 1673 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 1635 agcagcagcagcatcaccaccagcagcagcagcag 1669
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 ||||||||||||||||| | |||||||||||| Sbjct: 153357 cagcagcaccaccaccagcagcagcagcagca 153326 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 293 cagcaccaccaccaccggcagcagcagcag 322 ||||| |||||||||| ||||||||||||| Sbjct: 153357 cagcagcaccaccaccagcagcagcagcag 153328
>gb|AF009519.1|AF009519 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1560 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 668 caccaccaccaccagcagcagcagcagt 695 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1128 accaccaccaccagcagcagcagcag 1153 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1130 caccaccaccagcagcagcagcagcagt 1157 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 809 caccaccaccaccaacagcagcagcagt 836
>gb|U70650.1|MMU70650 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1552 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 668 caccaccaccaccagcagcagcagcagt 695 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1128 accaccaccaccagcagcagcagcag 1153 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1130 caccaccaccagcagcagcagcagcagt 1157 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 809 caccaccaccaccaacagcagcagcagt 836
>gb|U70649.1|MMU70649 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1547 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 671 caccaccaccaccagcagcagcagcagt 698 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1131 accaccaccaccagcagcagcagcag 1156 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1133 caccaccaccagcagcagcagcagcagt 1160 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 812 caccaccaccaccaacagcagcagcagt 839
>gb|U70648.1|MMU70648 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1546 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 662 caccaccaccaccagcagcagcagcagt 689 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 803 caccaccaccaccaacagcagcagcagt 830
>gb|U70647.1|MMU70647 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1546 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 662 caccaccaccaccagcagcagcagcagt 689 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 803 caccaccaccaccaacagcagcagcagt 830
>gb|U70646.1|MMU70646 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 674 caccaccaccaccagcagcagcagcagt 701 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1134 accaccaccaccagcagcagcagcag 1159 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1136 caccaccaccagcagcagcagcagcagt 1163 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 815 caccaccaccaccaacagcagcagcagt 842
>gb|U70645.1|MMU70645 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1546 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 674 caccaccaccaccagcagcagcagcagt 701 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1134 accaccaccaccagcagcagcagcag 1159 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1136 caccaccaccagcagcagcagcagcagt 1163 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 815 caccaccaccaccaacagcagcagcagt 842
>gb|U70644.1|MMU70644 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1549 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 665 caccaccaccaccagcagcagcagcagt 692 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1125 accaccaccaccagcagcagcagcag 1150 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1127 caccaccaccagcagcagcagcagcagt 1154 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 806 caccaccaccaccaacagcagcagcagt 833
>gb|U70643.1|MMU70643 Mus musculus sex determining protein (Sry) gene, complete cds Length = 1490 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 634 caccaccaccaccagcagcagcagcagt 661 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 775 caccaccaccaccaacagcagcagcagt 802
>gb|U70642.1|MMU70642 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1546 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 670 caccaccaccaccagcagcagcagcagt 697 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1130 accaccaccaccagcagcagcagcag 1155 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1132 caccaccaccagcagcagcagcagcagt 1159 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 811 caccaccaccaccaacagcagcagcagt 838
>gb|U70641.1|MMU70641 Mus musculus domesticus sex determining protein (Sry) gene, complete cds Length = 1550 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 663 caccaccaccaccagcagcagcagcagt 690 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1123 accaccaccaccagcagcagcagcag 1148 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1125 caccaccaccagcagcagcagcagcagt 1152 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 804 caccaccaccaccaacagcagcagcagt 831
>gb|AF070933.1|AF070933 Mus musculus domesticus strain B6-YFVB sex determining region of Y protein (Sry) gene, complete cds Length = 8573 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 4335 caccaccaccaccagcagcagcagcagt 4362 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 4795 accaccaccaccagcagcagcagcag 4820 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 4797 caccaccaccagcagcagcagcagcagt 4824 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 4476 caccaccaccaccaacagcagcagcagt 4503
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 191 cagacagacagacagacatgggga 214 |||||||||||||||||||||||| Sbjct: 134638 cagacagacagacagacatgggga 134615
>gb|AF068054.1|AF068054 Mus musculus domesticus strain B6-YTIR sex-determining region of Y protein (Sry) gene, complete cds Length = 8636 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 4365 caccaccaccaccagcagcagcagcagt 4392 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 4506 caccaccaccaccaacagcagcagcagt 4533
>gb|AF068053.1|AF068053 Mus musculus domesticus strain B6-YAKR sex-determining region of Y protein (Sry) gene, complete cds Length = 2749 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1437 caccaccaccaccagcagcagcagcagt 1464 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 297 accaccaccaccggcagcagcagcag 322 |||||||||||| ||||||||||||| Sbjct: 1897 accaccaccaccagcagcagcagcag 1922 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||| | |||||||||||||| Sbjct: 1899 caccaccaccagcagcagcagcagcagt 1926 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1578 caccaccaccaccaacagcagcagcagt 1605
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcag 319 |||||||||||||||||||||||| Sbjct: 9114 caccaccaccaccggcagcagcag 9091
>gb|U03645.1|MMU03645 Mus musculus domesticus Torino (Sry) gene, complete cds Length = 2215 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| |||||||||||||| Sbjct: 1304 caccaccaccaccagcagcagcagcagt 1331 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcagt 323 ||||||||||||| ||||||||||||| Sbjct: 1445 caccaccaccaccaacagcagcagcagt 1472
>emb|AJ272182.1|DME272182 Drosophila melanogaster partial spalt-related gene Length = 17671 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcagt 323 ||||||||||||||| ||| | |||||||||||||| Sbjct: 10354 agcagcagcaccaccgccagcagcagcagcagcagt 10389 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 287 aagcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||| || |||||||| |||||||||||| Sbjct: 10347 aagcagcagcagcagcaccaccgccagcagcagcag 10382 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| ||||||| || ||||||||||||| Sbjct: 10351 agcagcagcagcaccaccgccagcagcagcagcag 10385
>gb|AY830453.1| Petromyzon marinus SoxE1 (SoxE1) mRNA, complete cds Length = 2434 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 1373 caccaccaccaccagcagcagcagcag 1399
>gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, complete sequence Length = 185727 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 6401 caccaccaccaccagcagcagcagcag 6375
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||| | ||||||||| Sbjct: 48631 agcagcagcaccaccaccaacagcagcagca 48661 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagca 321 |||||||| |||||||||| ||||||||||| Sbjct: 48630 cagcagcagcaccaccaccaacagcagcagca 48661
>gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, complete sequence Length = 200922 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 89777 caccaccaccaccagcagcagcagcag 89803
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 89302 caccaccaccaccagcagcagcagcag 89328
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 42410 caccaccaccaccagcagcagcagcag 42436
>gb|AC166365.4| Mus musculus BAC clone RP24-428H14 from chromosome 9, complete sequence Length = 172948 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 21784 caccaccaccaccagcagcagcagcag 21810
>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence Length = 155861 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 29667 caccaccaccaccagcagcagcagcag 29641
>gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, complete sequence Length = 181572 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 16413 caccaccaccaccagcagcagcagcag 16439
>ref|NM_197774.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027P10.21), mRNA Length = 1011 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccacc 308 ||||||||||||||||||||||| Sbjct: 921 caagcagcagcaccaccaccacc 943
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 75129 caccaccaccaccagcagcagcagcag 75155
>gb|AC109244.11| Mus musculus chromosome 15, clone RP23-459E13, complete sequence Length = 183400 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 16430 caccaccaccaccagcagcagcagcag 16456 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 16452 agcagcagcaccaccaccacc 16472
>gb|AY186659.1| Cancer magister clone Cma31 microsatellite sequence Length = 405 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| | |||||||||||| Sbjct: 204 agcagcagcaccaccaccatcaacagcagcagcag 170
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 892555 caccaccaccaccagcagcagcagcag 892581 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||| ||||||||||||| |||||||||||| Sbjct: 892547 agcaccaccaccaccaccaccagcagcagcag 892578
>gb|AC104488.4| Trypanosoma brucei chromosome 5 clone RPCI93-26K5, complete sequence Length = 136001 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 67117 caccaccaccaccagcagcagcagcag 67091 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||| ||||||||||||| |||||||||||| Sbjct: 67125 agcaccaccaccaccaccaccagcagcagcag 67094
>gb|AC166174.2| Mus musculus BAC clone RP23-41B11 from chromosome 12, complete sequence Length = 233084 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 23919 caccaccaccaccagcagcagcagcag 23893
>gb|DQ145254.1| Drosophila miranda neo-X psq gene, partial sequence Length = 1184 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||||||||| || | ||||||||||||| Sbjct: 236 agcagcagcaccaccagcagcagcagcagcagcag 270 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||| |||||||| | ||||||||||||| Sbjct: 235 cagcagcagcaccaccagcagcagcagcagcag 267
>gb|AC120375.11| Mus musculus chromosome 14, clone RP24-123H11, complete sequence Length = 158760 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || |||||||||||||||| |||| Sbjct: 116254 agcagcagcagcagcaccaccggcagcagctgcag 116220
>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence Length = 253738 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 14493 caccaccaccaccagcagcagcagcag 14467
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 30255 caccaccaccaccagcagcagcagcag 30281
>gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, complete sequence Length = 205851 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 86585 caccaccaccaccagcagcagcagcag 86611
>ref|XM_607313.2| PREDICTED: Bos taurus similar to Orphan nuclear receptor NR4A3 (Nuclear hormone receptor NOR-1) (Neuron-derived orphan receptor 1) (Mitogen induced nuclear orphan receptor) (LOC528877), mRNA Length = 1872 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 502 caccaccaccaccagcagcagcagcag 528
>ref|XM_365089.1| Magnaporthe grisea 70-15 hypothetical protein (MG09934.4) partial mRNA Length = 1731 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 1480 caccaccaccaccagcagcagcagcag 1506
>ref|XM_959150.1| Neurospora crassa OR74A hypothetical protein (NCU02173.1) partial mRNA Length = 3618 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 241 caccaccaccaccagcagcagcagcag 267
>gb|AC101921.8| Mus musculus chromosome 15, clone RP24-176G17, complete sequence Length = 166654 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 tcagacagacagacagacatggg 212 ||||||||||||||||||||||| Sbjct: 153749 tcagacagacagacagacatggg 153771
>gb|AC140931.5| Mus musculus BAC clone RP23-3L22 from chromosome 15, complete sequence Length = 202576 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 tcagacagacagacagacatggg 212 ||||||||||||||||||||||| Sbjct: 200834 tcagacagacagacagacatggg 200812 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tcagacagacagacagacat 209 |||||||||||||||||||| Sbjct: 25687 tcagacagacagacagacat 25706
>gb|AC140340.3| Mus musculus BAC clone RP24-260O19 from chromosome 14, complete sequence Length = 168454 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 125404 caccaccaccaccagcagcagcagcag 125430
>ref|XM_322753.1| Neurospora crassa OR74A predicted protein (NCU03496.1) partial mRNA Length = 2124 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 560 caccaccaccaccagcagcagcagcag 586
>ref|XM_950740.1| Neurospora crassa OR74A hypothetical protein (NCU03496.1) partial mRNA Length = 2124 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 560 caccaccaccaccagcagcagcagcag 586
>ref|XM_952072.1| Neurospora crassa OR74A hypothetical protein (NCU01742.1) partial mRNA Length = 1794 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 300 accaccaccggcagcagcagcag 322 ||||||||||||||||||||||| Sbjct: 651 accaccaccggcagcagcagcag 629
>ref|XM_952842.1| Neurospora crassa OR74A hypothetical protein (NCU09837.1) partial mRNA Length = 990 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 ccaccaccaccggcagcagcagc 320 ||||||||||||||||||||||| Sbjct: 123 ccaccaccaccggcagcagcagc 145
>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence Length = 181695 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 140033 caccaccaccaccagcagcagcagcag 140007
>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland Research Institute) complete sequence Length = 197530 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||| |||||| ||||||||||||| Sbjct: 12894 agcagcagcaccaataccaccagcagcagcagcag 12860
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 4631 caccaccaccaccagcagcagcagcag 4605
>ref|XM_328180.1| Neurospora crassa OR74A hypothetical protein (NCU01742.1) partial mRNA Length = 1794 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 300 accaccaccggcagcagcagcag 322 ||||||||||||||||||||||| Sbjct: 651 accaccaccggcagcagcagcag 629
>ref|XM_329362.1| Neurospora crassa OR74A hypothetical protein (NCU02173.1) partial mRNA Length = 3618 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 241 caccaccaccaccagcagcagcagcag 267
>ref|XM_330486.1| Neurospora crassa OR74A hypothetical protein (NCU09837.1) partial mRNA Length = 990 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 ccaccaccaccggcagcagcagc 320 ||||||||||||||||||||||| Sbjct: 123 ccaccaccaccggcagcagcagc 145
>gb|AC110177.19| Mus musculus chromosome 1, clone RP24-245K23, complete sequence Length = 165052 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 122888 caccaccaccaccagcagcagcagcag 122914
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 167084 caccaccaccaccagcagcagcagcag 167058
>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence Length = 171059 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 42089 caccaccaccaccagcagcagcagcag 42115
>ref|XM_715585.1| Candida albicans SC5314 putative signal transduction kinase (CaO19_11717), mRNA Length = 3687 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccacc 308 ||||||||||||||||||||||| Sbjct: 850 caagcagcagcaccaccaccacc 872
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 166982 caccaccaccaccagcagcagcagcag 167008
>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence Length = 184039 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 22190 caccaccaccaccagcagcagcagcag 22216 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 22209 agcagcagcaccaccaccacc 22229
>ref|XM_715458.1| Candida albicans SC5314 putative signal transduction kinase (CaO19_4242), mRNA Length = 3687 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccacc 308 ||||||||||||||||||||||| Sbjct: 850 caagcagcagcaccaccaccacc 872
>gb|AC100730.8| Mus musculus chromosome 15, clone RP24-288B1, complete sequence Length = 190788 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 112474 caccaccaccaccagcagcagcagcag 112448
>gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1583_A05, complete sequence Length = 126987 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||| ||||||||||||||||||||| Sbjct: 67138 caccaacaccaccggcagcagcagcag 67112
>ref|XM_813437.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510013.260) partial mRNA Length = 1170 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 286 caagcagcagcaccaccaccaccggcagcagcagc 320 |||||| || ||||||||||||| ||||||||||| Sbjct: 484 caagcaccaccaccaccaccaccagcagcagcagc 518 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||| ||||||||||||| |||||||||||| Sbjct: 486 agcaccaccaccaccaccaccagcagcagcag 517
>gb|AY215075.1| Mus musculus recombinase activating gene 1 (Rag1) and recombinase activating gene 2 (Rag2) genes, complete cds Length = 44763 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||||||||| ||||||| Sbjct: 18010 caccaccaccaccggcagcggcagcag 18036
>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence Length = 163674 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 222 tggagtcttactaaagatcactt 244 ||||||||||||||||||||||| Sbjct: 31072 tggagtcttactaaagatcactt 31094
>gb|AC133945.2| Mus musculus chromosome 18 clone RP24-146N1, complete sequence Length = 139630 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 106401 caccaccaccaccagcagcagcagcag 106375
>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence Length = 148447 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagc 320 ||||||||||||||||||| |||||||||| Sbjct: 76548 cagcagcaccaccaccaccaccagcagcagc 76578 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagc 317 ||||||| ||||||||||||| |||||||| Sbjct: 76549 agcagcaccaccaccaccaccagcagcagc 76578
>gb|AC002458.1| Homo sapiens BAC clone CTB-98M4 from 7, complete sequence Length = 82032 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 42733 caccaccaccaccagcagcagcagcag 42707
>ref|XM_974485.1| PREDICTED: Mus musculus RIKEN cDNA B020017C02 gene (B020017C02Rik), mRNA Length = 1924 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 457 caccaccaccaccagcagcagcagcag 483
>ref|XM_143238.5| PREDICTED: Mus musculus RIKEN cDNA B020017C02 gene (B020017C02Rik), mRNA Length = 1924 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 457 caccaccaccaccagcagcagcagcag 483
>ref|XM_915637.2| PREDICTED: Mus musculus RIKEN cDNA B020017C02 gene (B020017C02Rik), mRNA Length = 1924 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 457 caccaccaccaccagcagcagcagcag 483
>gb|AC140212.2| Mus musculus BAC clone RP23-267G14 from chromosome 15, complete sequence Length = 177379 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 144360 caccaccaccaccagcagcagcagcag 144386 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccacc 308 ||||||||||||||||||||| Sbjct: 144382 agcagcagcaccaccaccacc 144402
>ref|XM_754793.1| Ustilago maydis 521 hypothetical protein (UM03739.1) partial mRNA Length = 3561 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 3314 caccaccaccaccagcagcagcagcag 3340
>ref|XM_757449.1| Ustilago maydis 521 hypothetical protein (UM06395.1) partial mRNA Length = 2208 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 897 caccaccaccaccagcagcagcagcag 923
>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete sequence Length = 202415 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 38024 caccaccaccaccagcagcagcagcag 38050
>ref|XM_820435.1| Trypanosoma brucei TREU927 clone RPCI93-26K5 protein kinase (Tb927.5.2820) partial mRNA Length = 3093 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 1867 caccaccaccaccagcagcagcagcag 1841 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 291 agcagcaccaccaccaccggcagcagcagcag 322 |||| ||||||||||||| |||||||||||| Sbjct: 1875 agcaccaccaccaccaccaccagcagcagcag 1844
>gb|AY179510.2| Eimeria maxima 82 kDa gametocyte antigen (gam82) mRNA, complete cds Length = 2145 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 1259 caccaccaccaccagcagcagcagcag 1285 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||| |||||||||||| |||||||||||| Sbjct: 1248 agcagcagtaccaccaccaccaccagcagcagcag 1282
>gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosome 15, complete sequence Length = 180985 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 8327 caccaccaccaccagcagcagcagcag 8301
>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence Length = 158764 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 24725 caccaccaccaccagcagcagcagcag 24751
>gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome 7, complete sequence Length = 192288 Score = 46.1 bits (23), Expect = 0.081 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||||||||||| Sbjct: 13106 agcagcagcaccaccaccaccag-agcagcagcag 13139
>ref|XM_803006.1| Trypanosoma cruzi strain CL Brener inositol polyphosphate kinase-like protein (Tc00.1047053506985.60) partial mRNA Length = 2187 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 292 gcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||| | ||||||||||||| Sbjct: 21 gcagcaccaccaccagcagcagcagcagcag 51
>ref|XM_807128.1| Trypanosoma cruzi strain CL Brener CYC2-like cyclin 4 (Tc00.1047053506791.10) partial mRNA Length = 2490 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 57 caccaccaccaccagcagcagcagcag 83
>ref|XM_809119.1| Trypanosoma cruzi strain CL Brener inositol polyphosphate kinase-like protein (Tc00.1047053504213.90) partial mRNA Length = 2199 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 31 caccaccaccaccagcagcagcagcag 57 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Plus Query: 289 gcagcagcaccaccaccaccggcagcagcagcag 322 |||||| ||||||||||||| |||||||||||| Sbjct: 21 gcagcaccaccaccaccaccaccagcagcagcag 54
>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence Length = 159308 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 25459 caccaccaccaccagcagcagcagcag 25433
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence Length = 138622 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 123896 caccaccaccaccagcagcagcagcag 123922 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 atcagacagacagacagaca 208 |||||||||||||||||||| Sbjct: 4585 atcagacagacagacagaca 4566
>ref|XM_811573.1| Trypanosoma cruzi strain CL Brener CYC2-like cyclin (Tc00.1047053507677.150) partial mRNA Length = 3126 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 445 caccaccaccaccagcagcagcagcag 471
>ref|XM_812330.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507809.100) partial mRNA Length = 4845 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 2093 caccaccaccaccagcagcagcagcag 2119
>ref|XM_812332.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507809.130) partial mRNA Length = 3711 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 2947 caccaccaccacctgcagcagcagcag 2921
>gb|AC125372.4| Mus musculus BAC clone RP24-505G5 from chromosome 7, complete sequence Length = 131080 Score = 46.1 bits (23), Expect = 0.081 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||||||||||||||| | ||||||||||| Sbjct: 123376 agcagcagcaccaccaccaccag-agcagcagcag 123409
>ref|XM_812822.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511391.170) partial mRNA Length = 606 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 562 caccaccaccaccagcagcagcagcag 536
>gb|AC125091.3| Mus musculus BAC clone RP24-165P5 from chromosome 18, complete sequence Length = 188837 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 29492 caccaccaccaccagcagcagcagcag 29518
>gb|AC110789.6| Homo sapiens BAC clone RP11-516D7 from 4, complete sequence Length = 181262 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||| |||| ||||||||||||| Sbjct: 111263 agcagcagccccaccagcaccagcagcagcagcag 111297 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||| |||| ||||||||||||| Sbjct: 111203 agcagcagccccaccagcaccagcagcagcagcag 111237
>ref|XM_797995.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053511703.19) partial mRNA Length = 913 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagca 321 |||| ||||||||||||||||| |||||||| Sbjct: 861 agcaacaccaccaccaccggcaccagcagca 891
>ref|XM_800901.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053509155.39) partial mRNA Length = 1039 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 291 agcagcaccaccaccaccggcagcagcagca 321 |||| ||||||||||||||||| |||||||| Sbjct: 871 agcaacaccaccaccaccggcaccagcagca 901
>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence Length = 176278 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 8613 caccaccaccaccagcagcagcagcag 8639
>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence Length = 216974 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 194449 caccaccaccaccagcagcagcagcag 194423
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 194782 caccaccaccaccagcagcagcagcag 194808
>gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, complete sequence Length = 207411 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 46425 caccaccaccaccagcagcagcagcag 46399
>gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete sequence Length = 214857 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 51131 caccaccaccaccagcagcagcagcag 51105
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 57730 caccaccaccaccagcagcagcagcag 57704
>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence Length = 214461 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || |||||||||||||||| |||| Sbjct: 191199 agcagcagcagcagcaccaccggcagcagctgcag 191233
>gb|AC102409.10| Mus musculus chromosome 18, clone RP24-365B20, complete sequence Length = 137137 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 120977 caccaccaccaccagcagcagcagcag 121003
>gb|AC107707.10| Mus musculus chromosome 1, clone RP24-268C13, complete sequence Length = 178000 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 146858 caccaccaccaccagcagcagcagcag 146884
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 118607 caccaccaccaccagcagcagcagcag 118581
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 131779 caccaccaccaccagcagcagcagcag 131805
>gb|AC109253.9| Mus musculus, clone RP23-351D8, complete sequence Length = 254578 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 129635 caccaccaccaccagcagcagcagcag 129661
>emb|CR753894.12| Mouse DNA sequence from clone RP23-222I6 on chromosome 2, complete sequence Length = 110921 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 39718 caccaccaccacccgcagcagcagcag 39692
>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence Length = 223952 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 192 agacagacagacagacatgggga 214 ||||||||||||||||||||||| Sbjct: 30861 agacagacagacagacatgggga 30839
>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence Length = 208667 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 cagacagacagacagacatgggg 213 ||||||||||||||||||||||| Sbjct: 151227 cagacagacagacagacatgggg 151249
>emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chromosome 6 Contains part of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957), complete sequence Length = 82601 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 290 cagcagcaccaccaccaccggcagcagcagcagta 324 |||||||| ||||||||| ||||||||||||||| Sbjct: 46189 cagcagcagtaccaccaccagcagcagcagcagta 46155
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 72918 caccaccaccaccagcagcagcagcag 72944
>ref|XM_785011.1| PREDICTED: Strongylocentrotus purpuratus similar to transposable element tcb1 transposase (5L771) (LOC585174), mRNA Length = 1089 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||| ||||||||||||||| ||||||||||||| Sbjct: 368 agcaacagcaccaccaccacaagcagcagcagcag 402
>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland Research Institute) complete sequence Length = 216194 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 155767 caccaccaccaccagcagcagcagcag 155793
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 105557 caccaccaccaccagcagcagcagcag 105583
>gb|BT023770.1| Drosophila melanogaster LP23752 full insert cDNA Length = 4452 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagca 318 ||||||||||||||||||||| |||||||| Sbjct: 3093 agcagcagcaccaccaccaccaccagcagca 3123
>gb|AC138781.4| Homo sapiens BAC clone RP11-366H4 from 4, complete sequence Length = 162771 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 ||||||||| |||||| |||| ||||||||||||| Sbjct: 153772 agcagcagccccaccagcaccagcagcagcagcag 153806 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 288 agcagcagcaccaccaccaccggcagcagcagc 320 ||||||||||||| ||||| | ||||||||||| Sbjct: 153880 agcagcagcaccagcaccagcagcagcagcagc 153912 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 290 cagcagcaccaccaccaccggcagcagcagcag 322 |||||||| ||||| |||| ||||||||||||| Sbjct: 153879 cagcagcagcaccagcaccagcagcagcagcag 153911
>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains the Adcy1 gene for adenylate cyclase 1, a novel gene and a CpG island, complete sequence Length = 189132 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 174304 caccaccaccaccagcagcagcagcag 174330
>emb|AL691456.7| Mouse DNA sequence from clone RP23-468K2 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2 and the Trim32 gene for tripartite motif protein 32, complete sequence Length = 158960 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 65336 caccaccaccaccagcagcagcagcag 65362
>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20 Length = 122151 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 35008 caccaccaccaccagcagcagcagcag 34982
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 300 accaccaccggcagcagcagcag 322 ||||||||||||||||||||||| Sbjct: 27207 accaccaccggcagcagcagcag 27185
>gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, complete sequence Length = 184805 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 cagacagacagacagacatgggg 213 ||||||||||||||||||||||| Sbjct: 133746 cagacagacagacagacatgggg 133724
>emb|AL731827.6| Mouse DNA sequence from clone RP23-109M24 on chromosome 11, complete sequence Length = 115109 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 41121 caccaccaccaccagcagcagcagcag 41147
>emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chromosome 4, complete sequence Length = 228869 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 199028 caccaccaccaccagcagcagcagcag 199054
>gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, complete sequence Length = 210006 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 192 agacagacagacagacatgggga 214 ||||||||||||||||||||||| Sbjct: 142490 agacagacagacagacatgggga 142468
>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete sequence Length = 400029 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 caccaccaccaccggcagcagcagcag 322 ||||||||||||| ||||||||||||| Sbjct: 333114 caccaccaccaccagcagcagcagcag 333140
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 180309 agcagcagcagcagcaccaccagcagcagcagcag 180275 Score = 44.1 bits (22), Expect = 0.32 Identities = 31/34 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagca 321 |||||||||| |||||||| | |||||||||||| Sbjct: 180306 agcagcagcagcaccaccagcagcagcagcagca 180273 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 289 gcagcagcaccaccaccaccggcagcagcagca 321 ||||||||| |||||||| | |||||||||||| Sbjct: 180326 gcagcagcagcaccaccagcagcagcagcagca 180294
>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165928 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| || ||||||| ||||||||||||| Sbjct: 112348 agcagcagcagcaacaccaccagcagcagcagcag 112314 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 288 agcagcagcaccaccaccaccggcagcagcagcag 322 |||||||||| |||||||| | ||||||||||||| Sbjct: 112345 agcagcagcaacaccaccagcagcagcagcagcag 112311 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,054,618 Number of Sequences: 3902068 Number of extensions: 5054618 Number of successful extensions: 427024 Number of sequences better than 10.0: 2031 Number of HSP's better than 10.0 without gapping: 2052 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 400162 Number of HSP's gapped (non-prelim): 24621 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)