ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast03e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018536.1| Zea mays clone EL01N0435E10.d mRNA sequence Length = 1500 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 314 cgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgggtgttgtgcgggt 373 ||||||| |||||||||||||| ||||| ||||||||||| |||||| |||| |||||| Sbjct: 1295 cgtcgtccgtgtcccacaggaacgcggcgtgcgcggcgagcacgtggctgttctgcgggg 1236 Query: 374 cggccctggccgcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||| |||||||||| |||||||||||||||||||| |||||||||| Sbjct: 1235 acgccttggccgcccgctcgaagtagctggaggcgcggtcctcgtcgc 1188
>gb|AY108973.1| Zea mays PCO082302 mRNA sequence Length = 756 Score = 119 bits (60), Expect = 8e-24 Identities = 96/108 (88%) Strand = Plus / Minus Query: 314 cgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgggtgttgtgcgggt 373 ||||||| |||||||||||||| ||||| ||||||||||| |||||| |||| |||||| Sbjct: 523 cgtcgtccgtgtcccacaggaacgcggcgtgcgcggcgagcacgtggctgttctgcgggg 464 Query: 374 cggccctggccgcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||| |||||||||| |||||||||||||||||||| |||||||||| Sbjct: 463 acgccttggccgcccgctcgaagtagctggaggcgcggtcctcgtcgc 416
>dbj|AK070000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039B07, full insert sequence Length = 1482 Score = 109 bits (55), Expect = 7e-21 Identities = 97/111 (87%) Strand = Plus / Minus Query: 311 cgccgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgggtgttgtgcg 370 |||||||||| |||||||||| ||| ||||| ||||||||||| |||||| |||| |||| Sbjct: 1161 cgccgtcgtccgtgtcccacaagaacgcggcgtgcgcggcgagaacgtggctgttctgcg 1102 Query: 371 ggtcggccctggccgcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 || ||| || || ||||| |||||||||||||||||||| |||||||||| Sbjct: 1101 gggaggctctcgctgcccgctcgaagtagctggaggcgcggtcctcgtcgc 1051
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 311 cgccgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgg 360 |||||||||| |||||||||| ||| ||||| ||||||||||| |||||| Sbjct: 2232084 cgccgtcgtccgtgtcccacaagaacgcggcgtgcgcggcgagaacgtgg 2232035 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 385 gcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||||| |||||||||||||||||||| |||||||||| Sbjct: 2231871 gcccgctcgaagtagctggaggcgcggtcctcgtcgc 2231835 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 31803202 cgtcgccgtctccgtcgccggcgccggcgccg 31803171 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggcgccggcgccgtcgtcgg 322 |||||||||||||||||||| Sbjct: 1867821 ggcgccggcgccgtcgtcgg 1867840
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 311 cgccgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgg 360 |||||||||| |||||||||| ||| ||||| ||||||||||| |||||| Sbjct: 122378 cgccgtcgtccgtgtcccacaagaacgcggcgtgcgcggcgagaacgtgg 122329 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 385 gcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||||| |||||||||||||||||||| |||||||||| Sbjct: 122165 gcccgctcgaagtagctggaggcgcggtcctcgtcgc 122129
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 311 cgccgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgg 360 |||||||||| |||||||||| ||| ||||| ||||||||||| |||||| Sbjct: 93972 cgccgtcgtccgtgtcccacaagaacgcggcgtgcgcggcgagaacgtgg 94021 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 385 gcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||||| |||||||||||||||||||| |||||||||| Sbjct: 94185 gcccgctcgaagtagctggaggcgcggtcctcgtcgc 94221
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 311 cgccgtcgtcggtgtcccacaggaaggcggcctgcgcggcgaggacgtgg 360 |||||||||| |||||||||| ||| ||||| ||||||||||| |||||| Sbjct: 2232096 cgccgtcgtccgtgtcccacaagaacgcggcgtgcgcggcgagaacgtgg 2232047 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 385 gcccggtcgaagtagctggaggcgcgctcctcgtcgc 421 ||||| |||||||||||||||||||| |||||||||| Sbjct: 2231883 gcccgctcgaagtagctggaggcgcggtcctcgtcgc 2231847 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 31893718 cgtcgccgtctccgtcgccggcgccggcgccg 31893687 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggcgccggcgccgtcgtcgg 322 |||||||||||||||||||| Sbjct: 1867819 ggcgccggcgccgtcgtcgg 1867838
>ref|XM_467971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcgg 322 ||||||||||||| ||||||||||||| Sbjct: 509 cggggccggcgcccgcgccgtcgtcgg 535
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcgg 322 ||||||||||||| ||||||||||||| Sbjct: 32343475 cggggccggcgcccgcgccgtcgtcgg 32343501 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 cgtcttcggggccggcgccggcgccg 315 ||||||||| |||||||||||||||| Sbjct: 5364662 cgtcttcggcgccggcgccggcgccg 5364687
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccgtcg 318 ||||||||||||||||||||||| Sbjct: 7557770 cggggccggcgccggcgccgtcg 7557748
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcgg 322 ||||||||||||| ||||||||||||| Sbjct: 119307 cggggccggcgcccgcgccgtcgtcgg 119333
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcgg 322 ||||||||||||| ||||||||||||| Sbjct: 4988 cggggccggcgcccgcgccgtcgtcgg 5014
>ref|XM_464464.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 cgtcttcggggccggcgccggcgccg 315 ||||||||| |||||||||||||||| Sbjct: 764 cgtcttcggcgccggcgccggcgccg 739
>ref|NM_186848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccgtcgtcg 321 |||||||||||||||||||| ||||| Sbjct: 340 cggggccggcgccggcgccgccgtcg 315
>ref|XM_472998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 462 gccggcgccggcgccgtcgtcg 483
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 124681 gccggcgccggcgccgtcgtcg 124702
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 20195 gccggcgccggcgccgtcgtcg 20216
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 24565050 gccggcgccggcgccgtcgtcg 24565071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gggccggcgccggcgccgtcg 318 ||||||||||||||||||||| Sbjct: 34205627 gggccggcgccggcgccgtcg 34205647 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 23486545 gccggcgccggcgccgtcgt 23486564 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 tcggggccggcgccggcgccgtcg 318 |||| ||||||||||||||||||| Sbjct: 22329409 tcggcgccggcgccggcgccgtcg 22329386
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 22170563 gccggcgccggcgccgtcgtcg 22170584 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtc 320 ||||||||||||||||||||| Sbjct: 24214476 gccggcgccggcgccgtcgtc 24214496
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcg 321 |||||||||||||||||||| ||||| Sbjct: 8363531 cggggccggcgccggcgccgccgtcg 8363556 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 8509894 cggggccggcgccggcgccg 8509875
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtcg 321 |||||||||||||||||||| ||||| Sbjct: 68629 cggggccggcgccggcgccgccgtcg 68654
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 cgtcttcggggccggcgccggcgccg 315 ||||||||| |||||||||||||||| Sbjct: 18243 cgtcttcggcgccggcgccggcgccg 18268
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 cgtcttcggggccggcgccggcgccg 315 ||||||||| |||||||||||||||| Sbjct: 90965 cgtcttcggcgccggcgccggcgccg 90990
>emb|AJ234488.1|HVU234488 Hordeum vulgare genomic DNA fragment; clone MWG0528.rev Length = 234 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 gcggcctgcgcggcgaggacgtgggt 362 ||||||||||||||||||| |||||| Sbjct: 109 gcggcctgcgcggcgaggaggtgggt 134
>dbj|AK108729.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D01, full insert sequence Length = 976 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 cgtcttcggggccggcgccggcgccg 315 ||||||||| |||||||||||||||| Sbjct: 764 cgtcttcggcgccggcgccggcgccg 739
>dbj|AK067865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124K14, full insert sequence Length = 2169 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 82 gccggcgccggcgccgtcgtcg 61
>dbj|AK067126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O03, full insert sequence Length = 1817 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 81 gccggcgccggcgccgtcgtcg 60
>emb|BX548072.14| Zebrafish DNA sequence from clone DKEYP-84A8 in linkage group 22, complete sequence Length = 188936 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 aaaaaagatctgactgaagaaa 49 |||||||||||||||||||||| Sbjct: 8894 aaaaaagatctgactgaagaaa 8873
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 22098908 gccggcgccggcgccgtcgtcg 22098929 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtc 320 ||||||||||||||||||||| Sbjct: 24142682 gccggcgccggcgccgtcgtc 24142702
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgtcg 321 |||||||||||||||||||||| Sbjct: 82447 gccggcgccggcgccgtcgtcg 82426
>ref|XM_479972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ccggcgccggcgccgtcgtcg 321 ||||||||||||||||||||| Sbjct: 62 ccggcgccggcgccgtcgtcg 82
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gtcttcggggccggcgccggcgccg 315 ||||||| ||||||||||||||||| Sbjct: 835033 gtcttcgcggccggcgccggcgccg 835009
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gggccggcgccggcgccgtcg 318 ||||||||||||||||||||| Sbjct: 117009 gggccggcgccggcgccgtcg 117029
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 287 cgccgtcttcggggccggcgccggc 311 |||||||||||| |||||||||||| Sbjct: 3691804 cgccgtcttcggcgccggcgccggc 3691828
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 gggccggcgccggcgccgtcg 318 ||||||||||||||||||||| Sbjct: 3543762 gggccggcgccggcgccgtcg 3543782
>tpg|BK000081.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like A3 gene, complete cds Length = 12300 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 283 tcgtcgccgtcttcggggccggcgccggcgccg 315 |||||| |||| |||| |||||||||||||||| Sbjct: 5418 tcgtcgtcgtcgtcggcgccggcgccggcgccg 5386
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ccggcgccggcgccgtcgtcg 321 ||||||||||||||||||||| Sbjct: 2011952 ccggcgccggcgccgtcgtcg 2011972
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 cgccgtcttcggggccggcgccggcgccg 315 ||||||||||| |||||||||||||||| Sbjct: 27173913 cgccgtcttcgtcgccggcgccggcgccg 27173941 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 283 tcgtcgccgtcttcggggccggcgccggcgccg 315 |||||| |||| |||| |||||||||||||||| Sbjct: 6769311 tcgtcgtcgtcgtcggcgccggcgccggcgccg 6769279 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ccggcgccggcgccgtcgtc 320 |||||||||||||||||||| Sbjct: 2582520 ccggcgccggcgccgtcgtc 2582501
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccgtcgtc 320 |||||||||||||| |||||||||| Sbjct: 5231170 cggggccggcgccgtcgccgtcgtc 5231194
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 cgccgtcttcggggccggcgccggcgccg 315 ||||||||||| |||||||||||||||| Sbjct: 30929 cgccgtcttcgtcgccggcgccggcgccg 30957
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 cgccgtcttcggggccggcgccggcgccg 315 ||||||||||| |||||||||||||||| Sbjct: 142723 cgccgtcttcgtcgccggcgccggcgccg 142751
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 283 tcgtcgccgtcttcggggccggcgccggcgccg 315 |||||| |||| |||| |||||||||||||||| Sbjct: 98990 tcgtcgtcgtcgtcggcgccggcgccggcgccg 98958
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ccggcgccggcgccgtcgtcg 321 ||||||||||||||||||||| Sbjct: 5482 ccggcgccggcgccgtcgtcg 5502
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ccggcgccggcgccgtcgtcg 321 ||||||||||||||||||||| Sbjct: 137150 ccggcgccggcgccgtcgtcg 137170
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tcggggccggcgccggcgccg 315 ||||||||||||||||||||| Sbjct: 1359 tcggggccggcgccggcgccg 1379
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgtc 320 ||||||||||||||||||||| Sbjct: 99167 gccggcgccggcgccgtcgtc 99187
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggcgccggcgccgtcgtcgg 322 |||||||||||||||||||| Sbjct: 92683 ggcgccggcgccgtcgtcgg 92702
>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence Length = 173315 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aaaaaagatctgactgaaga 47 |||||||||||||||||||| Sbjct: 76401 aaaaaagatctgactgaaga 76420
>gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, complete sequence Length = 154808 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 taaagtaaaaaagatctgactgaa 45 ||||||| |||||||||||||||| Sbjct: 33998 taaagtataaaagatctgactgaa 34021
>ref|NM_194086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 120 cgtcgccgtctccgtcgccggcgccggcgccg 89
>ref|XM_462659.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 tcggggccggcgccggcgccgtcg 318 |||| ||||||||||||||||||| Sbjct: 946 tcggcgccggcgccggcgccgtcg 923
>ref|XM_463583.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2052 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 968 ggccggcgccggcgccgtcg 987
>ref|NM_191534.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1458 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 1224 cgccggcgccgtcgtcggtg 1243
>ref|XM_477279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 319 cggggccggcgccggcgccg 300
>ref|XM_472825.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 552 gccggcgccggcgccgtcgt 533
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaaggcggcctgcgcggcga 352 |||||||||||||||||||| Sbjct: 720963 gaaggcggcctgcgcggcga 720944
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 287 cgccgtcttcggggccggcgccggcgccgtcg 318 ||||| || |||||||||||||||||| |||| Sbjct: 60496 cgccggctccggggccggcgccggcgcggtcg 60465
>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence Length = 157478 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 taaagtaaaaaagatctgactgaa 45 ||||||| |||||||||||||||| Sbjct: 41875 taaagtataaaagatctgactgaa 41852
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcgccggcgccgtcgtcggt 323 |||||||||||||||||||| Sbjct: 79193 gcgccggcgccgtcgtcggt 79174
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcgccggcgccgtcgtcggt 323 |||||||||||||||||||| Sbjct: 30623 gcgccggcgccgtcgtcggt 30604
>gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, complete sequence Length = 187065 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tgaagcagctacactagctc 174 |||||||||||||||||||| Sbjct: 122428 tgaagcagctacactagctc 122447
>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA sequence Length = 954 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 181 cggggccggcgccggcgccg 162
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 128428 cgtcgccgtctccgtcgccggcgccggcgccg 128397
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gattactaaagtaaaaaaga 35 |||||||||||||||||||| Sbjct: 1046831 gattactaaagtaaaaaaga 1046812
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggcgccggcgccgtcgtcgg 322 |||||||||||||||||||| Sbjct: 107590 ggcgccggcgccgtcgtcgg 107571
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 292 tcttcggggccggcgccggcgccgtcgt 319 ||||||| | |||||||||||||||||| Sbjct: 156059 tcttcggtgacggcgccggcgccgtcgt 156086
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 72489 ggccggcgccggcgccgtcg 72508
>dbj|AB244276.1| Oryza sativa (japonica cultivar-group) PLA2 mRNA for PLASTOCHRON2, complete cds Length = 2052 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 968 ggccggcgccggcgccgtcg 987
>gb|DQ397851.1| Cenarchaeum symbiosum clone C13G08, complete sequence Length = 38845 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 29104 cggggccggcgccggcgccg 29085
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccgtcgtcggtgtcccacag 332 |||||||||||||||||||| Sbjct: 854394 ccgtcgtcggtgtcccacag 854413
>gb|AC129097.27| Papio anubis clone rp41-53o7, complete sequence Length = 186113 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 156199 cggggccggcgccggcgccg 156218
>dbj|AB097474.1| Oryza sativa (japonica cultivar-group) transposon AnacB13 DNA, complete sequence Length = 1348 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 482 gccggcgccggcgccgtcgt 463
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 36268 gccggcgccggcgccgtcgt 36249
>dbj|AK163514.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230328M02 product:unclassifiable, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcggggccggcgccggcgcc 314 |||||||||||||||||||| Sbjct: 104 tcggggccggcgccggcgcc 123
>gb|DQ393277.1| Oryza sativa cultivar Yundao32 leafy head 2 gene, complete cds Length = 3946 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 1266 ggccggcgccggcgccgtcg 1285
>dbj|AK163013.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430073A11 product:unclassifiable, full insert sequence Length = 2307 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ggggccggcgccggcgccgtcgtc 320 ||||||||||||||||||| |||| Sbjct: 1 ggggccggcgccggcgccggcgtc 24
>gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog|CaM kinase homolog|MCK1 [Zea mays=maize, cv. Merit, root caps, mRNA, 2483 nt] Length = 2483 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 592 cggggccggcgccggcgccg 611
>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence Length = 196331 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aaaaaagatctgactgaaga 47 |||||||||||||||||||| Sbjct: 17563 aaaaaagatctgactgaaga 17582
>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence Length = 188292 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tcggggccggcgccggcgcc 314 |||||||||||||||||||| Sbjct: 22114 tcggggccggcgccggcgcc 22095
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgccggcgccgtcgtcg 321 |||||||||||||||||||| Sbjct: 132075 cggcgccggcgccgtcgtcg 132094
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 17895773 gccggcgccggcgccgtcgt 17895792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 tcgtcgccgtcttcggggccggcgccggcgccgtcg 318 |||||| |||| |||| | ||||||||||||||||| Sbjct: 14529451 tcgtcgtcgtcgtcggcggcggcgccggcgccgtcg 14529486
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gcgccggcgccgtcgtcggt 323 |||||||||||||||||||| Sbjct: 13813121 gcgccggcgccgtcgtcggt 13813102
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 39518047 ggccggcgccggcgccgtcg 39518066 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 33323185 cgccggcgccgtcgtcggtg 33323166
>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence Length = 162030 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctaaagtaaaaaagatctga 40 |||||||||||||||||||| Sbjct: 39574 ctaaagtaaaaaagatctga 39555
>gb|AE009561.1| Brucella melitensis 16M chromosome I, section 118 of 195 of the complete sequence Length = 10757 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gaaggcggcctgcgcggcga 352 |||||||||||||||||||| Sbjct: 1404 gaaggcggcctgcgcggcga 1423
>gb|AF325732.3| Xanthomonas oryzae pv. oryzae putative transposase, putative glycosyl transferase, conserved hypothetical protein 1, putative siderophore receptor, putative transporter, putative transcriptional regulator, and conserved hypothetical protein 2 genes, complete cds; and XpsD gene, partial cds Length = 10088 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccgtcgtcggtgtcccacag 332 |||||||||||||||||||| Sbjct: 4240 ccgtcgtcggtgtcccacag 4221
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggccggcgccggcgccgtcg 318 |||||||||||||||||||| Sbjct: 93061 ggccggcgccggcgccgtcg 93080
>gb|AC068481.2| Homo sapiens BAC clone CTD-2016F17 from 2, complete sequence Length = 155481 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tctggattactaaagtaaaa 31 |||||||||||||||||||| Sbjct: 23279 tctggattactaaagtaaaa 23260
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaaggcggcctgcgcggcga 352 |||||||||||||||||||| Sbjct: 742667 gaaggcggcctgcgcggcga 742648
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ccggcgccggcgccgtcgtc 320 |||||||||||||||||||| Sbjct: 37861 ccggcgccggcgccgtcgtc 37842
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 tcgtcgccgtcttcggggccggcgccggcgccgtcg 318 |||||| |||| |||| | ||||||||||||||||| Sbjct: 27740 tcgtcgtcgtcgtcggcggcggcgccggcgccgtcg 27775
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 116432 cgccggcgccgtcgtcggtg 116413
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 42362 cggggccggcgccggcgccg 42343
>dbj|BS000008.1| Pan troglodytes chromosome 22 clone:RP43-011E05, map 22, complete sequences Length = 104995 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 1524 cggggccggcgccggcgccg 1505
>dbj|BS000007.1| Pan troglodytes chromosome 22 clone:PTB-005B20, map 22, complete sequences Length = 123600 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 115829 cggggccggcgccggcgccg 115810
>dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E02, full insert sequence Length = 1536 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 319 cggggccggcgccggcgccg 300
>dbj|AK109683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-D07, full insert sequence Length = 1872 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 64 cgtcgccgtctccgtcgccggcgccggcgccg 33
>dbj|AK104311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D01, full insert sequence Length = 1576 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 1287 cgccggcgccgtcgtcggtg 1306
>dbj|AK072444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111A18, full insert sequence Length = 1903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gcgccggcgccgtcgtcggt 323 |||||||||||||||||||| Sbjct: 97 gcgccggcgccgtcgtcggt 116
>dbj|AK071014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079O17, full insert sequence Length = 1694 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 1404 cgccggcgccgtcgtcggtg 1423
>dbj|AK062500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-A08, full insert sequence Length = 903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgccggcgccgtcgtcggtg 324 |||||||||||||||||||| Sbjct: 247 cgccggcgccgtcgtcggtg 228
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5) Length = 893329 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 598298 cggggccggcgccggcgccg 598279
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccgtcgtcggtgtcccacag 332 |||||||||||||||||||| Sbjct: 885037 ccgtcgtcggtgtcccacag 885056
>gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome Length = 43804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 18002 cggggccggcgccggcgccg 17983
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ggaaggcggcctgcgcggcgagga 355 |||||||||||||||| ||||||| Sbjct: 1716505 ggaaggcggcctgcgccgcgagga 1716528
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 17905026 gccggcgccggcgccgtcgt 17905045
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 tcggggccggcgccggcgccgtcg 318 |||| ||||||||||||||||||| Sbjct: 80313 tcggcgccggcgccggcgccgtcg 80290
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggcgccggcgccgtcgt 319 |||||||||||||||||||| Sbjct: 42448 gccggcgccggcgccgtcgt 42467
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaaggcggcctgcgcggcga 352 |||||||||||||||||||| Sbjct: 738962 gaaggcggcctgcgcggcga 738943
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 106957 cggggccggcgccggcgccg 106976
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctaaagtaaaaaagatctga 40 |||||||||||||||||||| Sbjct: 495535 ctaaagtaaaaaagatctga 495516
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 cgtcgccgtcttcggggccggcgccggcgccg 315 ||||||||||| || |||||||||||||||| Sbjct: 4455 cgtcgccgtctccgtcgccggcgccggcgccg 4424
>dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kinase, partial cds, clone ZmCRK1 Length = 2140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggggccggcgccggcgccg 315 |||||||||||||||||||| Sbjct: 336 cggggccggcgccggcgccg 355 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,188,160 Number of Sequences: 3902068 Number of extensions: 4188160 Number of successful extensions: 83577 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80459 Number of HSP's gapped (non-prelim): 3094 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
