ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast03c07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 2e-21 Identities = 247/308 (80%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 ||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||||||| Sbjct: 5889645 tcaaggaaaggatagtcggtgtacccaaccacaggatcctgcgtgtagaaggtgttgcga 5889704 Query: 146 tcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaaga 205 ||||| || |||| || || |||||||| || ||||| |||| ||| ||||| || | Sbjct: 5889705 tcgtagttattcatgggcgcatcgagctcgaacctcttgggcagatcaggattcgccaag 5889764 Query: 206 aagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcc 265 |||| ||| || || || || || || |||||||| ||||| ||| | ||||| ||||| Sbjct: 5889765 aagagcctcccataggcgacgaggtcggcatagccatcggcaaccgccttgttcccttct 5889824 Query: 266 tttcgatcataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaa 324 | || || |||||||| ||||| ||||||||||| ||||| ||| |||||||||||||| Sbjct: 5889825 tcccggtcgtaccctccggcggcgatgaacgtgccattgaactgc-ttcctgaagggcaa 5889883 Query: 325 gagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtg 384 ||| | ||| | || || | |||||| || || |||||||| || || || |||||||| Sbjct: 5889884 gaggccgtgctgaatttgccggcggccgtcgacgatggccatgcgaggctccaccatgtg 5889943 Query: 385 gcaataga 392 ||| |||| Sbjct: 5889944 gcagtaga 5889951 Score = 91.7 bits (46), Expect = 2e-15 Identities = 222/278 (79%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 153 tgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaagaaagatcc 212 ||||||| || ||||| |||||||| ||| | ||||| || || ||||| | |||| || Sbjct: 5923978 tgttcaatggtgcgtcaagctcaaacctcctcggcaagtcagggttagccaagaagagcc 5924037 Query: 213 ttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcctttcgat 272 | ||||| || || ||||| |||||||| || |||||||| ||||| ||||||| || | Sbjct: 5924038 tcccgtaggcgacgagatcggcatagccatcagccaccaccttgttcccttcctcccggt 5924097 Query: 273 cataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaagagcctg 331 ||||||| ||||| || ||||| ||||| ||||| ||||| |||||| |||| ||| | Sbjct: 5924098 catacccgccagcagcgatgaaagtgccattgaactgctt-cctgaatggcaggagacca 5924156 Query: 332 tggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtggcaatag 391 |||| |||| || || || || || |||||||||| || || ||||||||||| ||| Sbjct: 5924157 tgggtgatcttcctccgtccttcgacgatggccattcctggctccaccatgtggcagtag 5924216 Query: 392 acaaatccttgatgcttgttgagttgttgcaccatgta 429 | ||| ||| | |||||||||||||| ||||||||||| Sbjct: 5924217 agaaagcctgggtgcttgttgagttgctgcaccatgta 5924254 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Plus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 5895802 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 5895861 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 5895862 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 5895921 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 5895922 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 5895978 Score = 69.9 bits (35), Expect = 7e-09 Identities = 269/347 (77%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 ||||||||||||||||||| |||||||||| | |||||||||| |||| |||||| | Sbjct: 5905849 catcaaggaaaggatagtccgtgtagccaacaacaggatcctgtatgtaaaaggtggacc 5905908 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaa 203 | ||||||||||| || |||| || | | || ||||| ||||| || ||||| || | Sbjct: 5905909 tattatacttgttcaatggtgcgttgatcgcgaacctcttgggcaagtccggattggcca 5905968 Query: 204 gaaagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgcctt 263 ||| ||| ||||| || || || |||||||| || ||||| | ||| ||||| |||| Sbjct: 5905969 agaagtgcctcccgtaggcgacgaggtcagcatatccatcggctatcaccttgtttcctt 5906028 Query: 264 cctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttcctgaagggca 323 ||| ||||| || ||||| || || ||||| ||||| ||||| |||| ||| |||| Sbjct: 5906029 cctcccgatcgtatcctccggcagcgatgaaagtgccattgaacagcttccggaatggca 5906088 Query: 324 agagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgt 383 ||| | |||| |||| ||||| || ||||| |||||||||| || || ||||||| Sbjct: 5906089 ggaggccatgggtgatcttcctgcgtccttccacgatggccattcttggctccaccatgt 5906148 Query: 384 ggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 |||| |||| ||| || | ||||||||||| || |||||||||||| Sbjct: 5906149 ggcagtagagaaaccccgggtgcttgttgagctgctgcaccatgtac 5906195 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 5895632 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 5895691 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 5895692 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 5895737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 5929447 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 5929506 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 5929507 tgcaccatgta 5929517 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 233 gcatagccgtcggccaccactttgttgccttcctttcgatcataccctccagcggcaatg 292 |||||||| || ||||||| ||||| ||||||| || ||||||||||| | ||||||| Sbjct: 5910564 gcatagccatcatccaccaccttgttcccttcctcccggtcataccctccggaggcaatg 5910623 Query: 293 aacgtgccgttgaat 307 || ||||| |||||| Sbjct: 5910624 aaagtgccattgaat 5910638
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 111 bits (56), Expect = 2e-21 Identities = 247/308 (80%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 ||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||||||| Sbjct: 11297 tcaaggaaaggatagtcggtgtacccaaccacaggatcctgcgtgtagaaggtgttgcga 11356 Query: 146 tcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaaga 205 ||||| || |||| || || |||||||| || ||||| |||| ||| ||||| || | Sbjct: 11357 tcgtagttattcatgggcgcatcgagctcgaacctcttgggcagatcaggattcgccaag 11416 Query: 206 aagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcc 265 |||| ||| || || || || || || |||||||| ||||| ||| | ||||| ||||| Sbjct: 11417 aagagcctcccataggcgacgaggtcggcatagccatcggcaaccgccttgttcccttct 11476 Query: 266 tttcgatcataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaa 324 | || || |||||||| ||||| ||||||||||| ||||| ||| |||||||||||||| Sbjct: 11477 tcccggtcgtaccctccggcggcgatgaacgtgccattgaactgc-ttcctgaagggcaa 11535 Query: 325 gagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtg 384 ||| | ||| | || || | |||||| || || |||||||| || || || |||||||| Sbjct: 11536 gaggccgtgctgaatttgccggcggccgtcgacgatggccatgcgaggctccaccatgtg 11595 Query: 385 gcaataga 392 ||| |||| Sbjct: 11596 gcagtaga 11603 Score = 91.7 bits (46), Expect = 2e-15 Identities = 222/278 (79%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 153 tgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaagaaagatcc 212 ||||||| || ||||| |||||||| ||| | ||||| || || ||||| | |||| || Sbjct: 45630 tgttcaatggtgcgtcaagctcaaacctcctcggcaagtcagggttagccaagaagagcc 45689 Query: 213 ttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcctttcgat 272 | ||||| || || ||||| |||||||| || |||||||| ||||| ||||||| || | Sbjct: 45690 tcccgtaggcgacgagatcggcatagccatcagccaccaccttgttcccttcctcccggt 45749 Query: 273 cataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaagagcctg 331 ||||||| ||||| || ||||| ||||| ||||| ||||| |||||| |||| ||| | Sbjct: 45750 catacccgccagcagcgatgaaagtgccattgaactgctt-cctgaatggcaggagacca 45808 Query: 332 tggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtggcaatag 391 |||| |||| || || || || || |||||||||| || || ||||||||||| ||| Sbjct: 45809 tgggtgatcttcctccgtccttcgacgatggccattcctggctccaccatgtggcagtag 45868 Query: 392 acaaatccttgatgcttgttgagttgttgcaccatgta 429 | ||| ||| | |||||||||||||| ||||||||||| Sbjct: 45869 agaaagcctgggtgcttgttgagttgctgcaccatgta 45906 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Plus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 17454 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 17513 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 17514 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 17573 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 17574 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 17630 Score = 69.9 bits (35), Expect = 7e-09 Identities = 269/347 (77%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 ||||||||||||||||||| |||||||||| | |||||||||| |||| |||||| | Sbjct: 27501 catcaaggaaaggatagtccgtgtagccaacaacaggatcctgtatgtaaaaggtggacc 27560 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaa 203 | ||||||||||| || |||| || | | || ||||| ||||| || ||||| || | Sbjct: 27561 tattatacttgttcaatggtgcgttgatcgcgaacctcttgggcaagtccggattggcca 27620 Query: 204 gaaagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgcctt 263 ||| ||| ||||| || || || |||||||| || ||||| | ||| ||||| |||| Sbjct: 27621 agaagtgcctcccgtaggcgacgaggtcagcatatccatcggctatcaccttgtttcctt 27680 Query: 264 cctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttcctgaagggca 323 ||| ||||| || ||||| || || ||||| ||||| ||||| |||| ||| |||| Sbjct: 27681 cctcccgatcgtatcctccggcagcgatgaaagtgccattgaacagcttccggaatggca 27740 Query: 324 agagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgt 383 ||| | |||| |||| ||||| || ||||| |||||||||| || || ||||||| Sbjct: 27741 ggaggccatgggtgatcttcctgcgtccttccacgatggccattcttggctccaccatgt 27800 Query: 384 ggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 |||| |||| ||| || | ||||||||||| || |||||||||||| Sbjct: 27801 ggcagtagagaaaccccgggtgcttgttgagctgctgcaccatgtac 27847 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 17284 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 17343 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 17344 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 17389 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 51099 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 51158 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 51159 tgcaccatgta 51169 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 233 gcatagccgtcggccaccactttgttgccttcctttcgatcataccctccagcggcaatg 292 |||||||| || ||||||| ||||| ||||||| || ||||||||||| | ||||||| Sbjct: 32216 gcatagccatcatccaccaccttgttcccttcctcccggtcataccctccggaggcaatg 32275 Query: 293 aacgtgccgttgaat 307 || ||||| |||||| Sbjct: 32276 aaagtgccattgaat 32290
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 111 bits (56), Expect = 2e-21 Identities = 247/308 (80%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 ||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||||||| Sbjct: 90420 tcaaggaaaggatagtcggtgtacccaaccacaggatcctgcgtgtagaaggtgttgcga 90479 Query: 146 tcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaaga 205 ||||| || |||| || || |||||||| || ||||| |||| ||| ||||| || | Sbjct: 90480 tcgtagttattcatgggcgcatcgagctcgaacctcttgggcagatcaggattcgccaag 90539 Query: 206 aagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcc 265 |||| ||| || || || || || || |||||||| ||||| ||| | ||||| ||||| Sbjct: 90540 aagagcctcccataggcgacgaggtcggcatagccatcggcaaccgccttgttcccttct 90599 Query: 266 tttcgatcataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaa 324 | || || |||||||| ||||| ||||||||||| ||||| ||| |||||||||||||| Sbjct: 90600 tcccggtcgtaccctccggcggcgatgaacgtgccattgaactgc-ttcctgaagggcaa 90658 Query: 325 gagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtg 384 ||| | ||| | || || | |||||| || || |||||||| || || || |||||||| Sbjct: 90659 gaggccgtgctgaatttgccggcggccgtcgacgatggccatgcgaggctccaccatgtg 90718 Query: 385 gcaataga 392 ||| |||| Sbjct: 90719 gcagtaga 90726 Score = 91.7 bits (46), Expect = 2e-15 Identities = 222/278 (79%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 153 tgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaagaaagatcc 212 ||||||| || ||||| |||||||| ||| | ||||| || || ||||| | |||| || Sbjct: 124753 tgttcaatggtgcgtcaagctcaaacctcctcggcaagtcagggttagccaagaagagcc 124812 Query: 213 ttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcctttcgat 272 | ||||| || || ||||| |||||||| || |||||||| ||||| ||||||| || | Sbjct: 124813 tcccgtaggcgacgagatcggcatagccatcagccaccaccttgttcccttcctcccggt 124872 Query: 273 cataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaagagcctg 331 ||||||| ||||| || ||||| ||||| ||||| ||||| |||||| |||| ||| | Sbjct: 124873 catacccgccagcagcgatgaaagtgccattgaactgctt-cctgaatggcaggagacca 124931 Query: 332 tggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtggcaatag 391 |||| |||| || || || || || |||||||||| || || ||||||||||| ||| Sbjct: 124932 tgggtgatcttcctccgtccttcgacgatggccattcctggctccaccatgtggcagtag 124991 Query: 392 acaaatccttgatgcttgttgagttgttgcaccatgta 429 | ||| ||| | |||||||||||||| ||||||||||| Sbjct: 124992 agaaagcctgggtgcttgttgagttgctgcaccatgta 125029 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Plus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 96577 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 96636 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 96637 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 96696 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 96697 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 96753 Score = 69.9 bits (35), Expect = 7e-09 Identities = 269/347 (77%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 ||||||||||||||||||| |||||||||| | |||||||||| |||| |||||| | Sbjct: 106624 catcaaggaaaggatagtccgtgtagccaacaacaggatcctgtatgtaaaaggtggacc 106683 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaa 203 | ||||||||||| || |||| || | | || ||||| ||||| || ||||| || | Sbjct: 106684 tattatacttgttcaatggtgcgttgatcgcgaacctcttgggcaagtccggattggcca 106743 Query: 204 gaaagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgcctt 263 ||| ||| ||||| || || || |||||||| || ||||| | ||| ||||| |||| Sbjct: 106744 agaagtgcctcccgtaggcgacgaggtcagcatatccatcggctatcaccttgtttcctt 106803 Query: 264 cctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttcctgaagggca 323 ||| ||||| || ||||| || || ||||| ||||| ||||| |||| ||| |||| Sbjct: 106804 cctcccgatcgtatcctccggcagcgatgaaagtgccattgaacagcttccggaatggca 106863 Query: 324 agagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgt 383 ||| | |||| |||| ||||| || ||||| |||||||||| || || ||||||| Sbjct: 106864 ggaggccatgggtgatcttcctgcgtccttccacgatggccattcttggctccaccatgt 106923 Query: 384 ggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 |||| |||| ||| || | ||||||||||| || |||||||||||| Sbjct: 106924 ggcagtagagaaaccccgggtgcttgttgagctgctgcaccatgtac 106970 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 96407 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 96466 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 96467 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 96512 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 130222 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 130281 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 130282 tgcaccatgta 130292 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 233 gcatagccgtcggccaccactttgttgccttcctttcgatcataccctccagcggcaatg 292 |||||||| || ||||||| ||||| ||||||| || ||||||||||| | ||||||| Sbjct: 111339 gcatagccatcatccaccaccttgttcccttcctcccggtcataccctccggaggcaatg 111398 Query: 293 aacgtgccgttgaat 307 || ||||| |||||| Sbjct: 111399 aaagtgccattgaat 111413
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 111 bits (56), Expect = 2e-21 Identities = 247/308 (80%), Gaps = 2/308 (0%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 ||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||||||| Sbjct: 1263 tcaaggaaaggatagtcggtgtacccaaccacaggatcctgcgtgtagaaggtgttgcga 1204 Query: 146 tcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaaga 205 ||||| || |||| || || |||||||| || ||||| |||| ||| ||||| || | Sbjct: 1203 tcgtagttattcatgggcgcatcgagctcgaacctcttgggcagatcaggattcgccaag 1144 Query: 206 aagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgccttcc 265 |||| ||| || || || || || || |||||||| ||||| ||| | ||||| ||||| Sbjct: 1143 aagagcctcccataggcgacgaggtcggcatagccatcggcaaccgccttgttcccttct 1084 Query: 266 tttcgatcataccctccagcggcaatgaacgtgccgttgaa-tgctttcctgaagggcaa 324 | || || |||||||| ||||| ||||||||||| ||||| ||| |||||||||||||| Sbjct: 1083 tcccggtcgtaccctccggcggcgatgaacgtgccattgaactgc-ttcctgaagggcaa 1025 Query: 325 gagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgtg 384 ||| | ||| | || || | |||||| || || |||||||| || || || |||||||| Sbjct: 1024 gaggccgtgctgaatttgccggcggccgtcgacgatggccatgcgaggctccaccatgtg 965 Query: 385 gcaataga 392 ||| |||| Sbjct: 964 gcagtaga 957
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Minus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 957 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 898 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 897 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 841 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 1187 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 1128 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 1127 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 1082
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Minus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 957 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 898 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 897 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 841 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 1187 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 1128 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 1127 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 1082
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Minus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 1012 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 953 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 952 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 893 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 892 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 836 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 1182 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 1123 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 1122 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 1077
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 73.8 bits (37), Expect = 4e-10 Identities = 142/177 (80%) Strand = Plus / Minus Query: 254 ttgttgccttcctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttc 313 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958 Query: 314 ctgaagggcaagagcctgtggggtatctgtctgcggccatccacaatggccattcggggt 373 ||||| |||| || | ||| | ||||| | |||||| || || |||||||| || || Sbjct: 957 ctgaatggcagcaggccgtgctgaatctgccggcggccgtcgacgatggccatgcgaggc 898 Query: 374 tctaccatgtggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 || ||||||||||| |||| || || | ||||||||||| || | |||||||||| Sbjct: 897 tccaccatgtggcagtagaggaaaccctcgtgcttgttgagctgctccaccatgtac 841 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 |||| |||||||| ||||| ||||| |||| || || || || |||||||||||||||| Sbjct: 1187 catcgaggaaagggtagtccgtgtatccaacaattgggtcttgagtgtagaaggtgttgc 1128 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaa 189 | || ||||||||||| || || || ||||| || ||||||||||| Sbjct: 1127 gatcatacttgttcaatggcgcatcaagctcgaacctcttaggcaa 1082
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Minus Query: 230 tcagcatagccgtcggccaccactttgttgccttcctttcgatcataccctccagcggca 289 |||||||| || || |||||||| |||||||| |||| ||||| ||||| || ||||| Sbjct: 1053 tcagcatacccttctgccaccaccttgttgccatcctcccgatcgtacccaccggcggcg 994 Query: 290 atgaacgtgccgttgaatgctttcctgaagggcaagagcctgtggggtatctgtctgcgg 349 |||||||| || | ||| || || | ||| |||||||||| ||| || ||||| ||||| Sbjct: 993 atgaacgttccatggaacgcctttcggaacggcaagagcccgtgagggatctgcctgcgc 934 Query: 350 ccatccacaatggccattcggggttctaccatgtggcaatagacaaatccttgatgcttg 409 || || || | ||||| ||||| |||||||||||||| |||| || || |||| || Sbjct: 933 ccgtcgacggtagccatgcggggctctaccatgtggcagtagagcaagccgctatgcctg 874 Query: 410 ttgagttgttgcaccatgta 429 ||||| || ||||||||||| Sbjct: 873 ttgagctgctgcaccatgta 854 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 |||| |||||| || ||||||||||||| |||||||| || |||||||||||| |||| Sbjct: 1197 tcaaagaaagggtaatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcgg 1138 Query: 146 tcgtacttgtt 156 ||||| ||||| Sbjct: 1137 tcgtatttgtt 1127
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 69.9 bits (35), Expect = 7e-09 Identities = 269/347 (77%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 ||||||||||||||||||| |||||||||| | |||||||||| |||| |||||| | Sbjct: 1190 catcaaggaaaggatagtccgtgtagccaacaacaggatcctgtatgtaaaaggtggacc 1131 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaa 203 | ||||||||||| || |||| || | | || ||||| ||||| || ||||| || | Sbjct: 1130 tattatacttgttcaatggtgcgttgatcgcgaacctcttgggcaagtccggattggcca 1071 Query: 204 gaaagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgcctt 263 ||| ||| ||||| || || || |||||||| || ||||| | ||| ||||| |||| Sbjct: 1070 agaagtgcctcccgtaggcgacgaggtcagcatatccatcggctatcaccttgtttcctt 1011 Query: 264 cctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttcctgaagggca 323 ||| ||||| || ||||| || || ||||| ||||| ||||| |||| ||| |||| Sbjct: 1010 cctcccgatcgtatcctccggcagcgatgaaagtgccattgaacagcttccggaatggca 951 Query: 324 agagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgt 383 ||| | |||| |||| ||||| || ||||| |||||||||| || || ||||||| Sbjct: 950 ggaggccatgggtgatcttcctgcgtccttccacgatggccattcttggctccaccatgt 891 Query: 384 ggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 |||| |||| ||| || | ||||||||||| || |||||||||||| Sbjct: 890 ggcagtagagaaaccccgggtgcttgttgagctgctgcaccatgtac 844
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 69.9 bits (35), Expect = 7e-09 Identities = 269/347 (77%) Strand = Plus / Minus Query: 84 catcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgc 143 ||||||||||||||||||| |||||||||| | |||||||||| |||| |||||| | Sbjct: 1173 catcaaggaaaggatagtccgtgtagccaacaacaggatcctgtatgtaaaaggtggacc 1114 Query: 144 ggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagcaa 203 | ||||||||||| || |||| || | | || ||||| ||||| || ||||| || | Sbjct: 1113 tattatacttgttcaatggtgcgttgatcgcgaacctcttgggcaagtccggattggcca 1054 Query: 204 gaaagatccttccgtaagcaacaagatcagcatagccgtcggccaccactttgttgcctt 263 ||| ||| ||||| || || || |||||||| || ||||| | ||| ||||| |||| Sbjct: 1053 agaagtgcctcccgtaggcgacgaggtcagcatatccatcggctatcaccttgtttcctt 994 Query: 264 cctttcgatcataccctccagcggcaatgaacgtgccgttgaatgctttcctgaagggca 323 ||| ||||| || ||||| || || ||||| ||||| ||||| |||| ||| |||| Sbjct: 993 cctcccgatcgtatcctccggcagcgatgaaagtgccattgaacagcttccggaatggca 934 Query: 324 agagcctgtggggtatctgtctgcggccatccacaatggccattcggggttctaccatgt 383 ||| | |||| |||| ||||| || ||||| |||||||||| || || ||||||| Sbjct: 933 ggaggccatgggtgatcttcctgcgtccttccacgatggccattcttggctccaccatgt 874 Query: 384 ggcaatagacaaatccttgatgcttgttgagttgttgcaccatgtac 430 |||| |||| ||| || | ||||||||||| || |||||||||||| Sbjct: 873 ggcagtagagaaaccccgggtgcttgttgagctgctgcaccatgtac 827
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 |||| |||||| || ||||||||||||| |||||||| || |||||||||||| |||| Sbjct: 1185 tcaaagaaagggtaatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcgg 1126 Query: 146 tcgtacttgtt 156 ||||| ||||| Sbjct: 1125 tcgtatttgtt 1115 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 230 tcagcatagccgtcggccaccactttgttgccttcctttcgatcataccc 279 |||||||| || || |||||||| ||||||||||||| ||||| ||||| Sbjct: 1041 tcagcatacccttctgccaccaccttgttgccttcctcccgatcgtaccc 992
>gb|DQ078769.1| Zea mays clone Zmcoi6.12 cold-inducible unknown mRNA Length = 336 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 |||| |||||| || ||||||||||||| |||||||| || |||||||||||| |||| Sbjct: 192 tcaaagaaagggtaatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcgg 133 Query: 146 tcgtacttgtt 156 ||||| ||||| Sbjct: 132 tcgtatttgtt 122
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 716 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 657 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 656 tgcaccatgta 646
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 872 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 813 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 812 tgcaccatgta 802
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 2005 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 1946 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 1945 tgcaccatgta 1935
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 1057 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 998 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 997 tgcaccatgta 987
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 |||| |||||| || ||||||||||||| |||||||| || |||||||||||| |||| Sbjct: 1221 tcaaagaaagggtaatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcgg 1162 Query: 146 tcgtacttgtt 156 ||||| ||||| Sbjct: 1161 tcgtatttgtt 1151 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 230 tcagcatagccgtcggccaccactttgttgccttcct 266 |||||||| || || |||||||| ||||||||||||| Sbjct: 1077 tcagcatacccttctgccaccaccttgttgccttcct 1041
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 359 atggccattcggggttctaccatgtggcaatagacaaatccttgatgcttgttgagttgt 418 |||||||||| || || ||||||||||| |||| ||| ||| | |||||||||||||| Sbjct: 910 atggccattcttggctccaccatgtggcagtagagaaaccctgggtgcttgttgagttgc 851 Query: 419 tgcaccatgta 429 ||||||||||| Sbjct: 850 tgcaccatgta 840
>dbj|AB030706.1| Lithospermum erythrorhizon mRNA for LEDI-5b protein, complete cds Length = 1465 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 86 tcaaggaaaggatagtctgtgtagccaatgataggatcctgtgtgtagaaggtgttgcgg 145 ||||| || |||||||| || ||||||| | |||||| |||||| |||| ||||| | Sbjct: 1147 tcaagaaatggatagtcagtatagccaacaacaggatcatgtgtgaagaatgtgttccta 1088 Query: 146 tcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 ||||||| ||| | |||||| || | |||||||||||| |||||||| ||||||| Sbjct: 1087 tcgtactcgttgagaggagcatcaatctcaaatctctttggcaaatcaggattag 1033
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 128 gtgtagaaggtgttgcggtcgtacttgtt 156 |||||||||||| |||||||||||||||| Sbjct: 1709 gtgtagaaggtggtgcggtcgtacttgtt 1681
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||| | |||||| || || |||||||||| ||||||||||||||||| Sbjct: 47579 tacttgtttagaggagcatcaagtgcaaatctctttggcaaatctggattagc 47631 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 174 caaatctcttaggcaaatctggattagc 201 |||||||||| ||||||||||||||||| Sbjct: 72360 caaatctctttggcaaatctggattagc 72387 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 174 caaatctcttaggcaaatctggattagc 201 |||||||||| ||||||||||||||||| Sbjct: 60423 caaatctcttcggcaaatctggattagc 60450 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Plus Query: 152 ttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 ||||||| |||||| || || |||||||||| || |||||||||||||| Sbjct: 53309 ttgttcagaggagcatcaagtgcaaatctctttggtaaatctggattagc 53358 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 caaatctcttaggcaaatctggatt 198 |||||||||| |||||||||||||| Sbjct: 85333 caaatctcttcggcaaatctggatt 85357 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 caaatctcttaggcaaatctggatt 198 |||||||||| |||||||||||||| Sbjct: 74946 caaatctctttggcaaatctggatt 74970
>dbj|AB104740.1| Pisum sativum PsOPR5 mRNA for hypothetical protein, complete cds Length = 1107 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||| | |||||| || || |||||||||| ||||||||||||||||| Sbjct: 1040 tacttgttgagaggagcatcaagtgcaaatctctttggcaaatctggattagc 988
>dbj|AB095742.1| Pisum sativum OPR5 gene for 12-oxophytodienoic acid 10, 11-reductase, complete cds Length = 2371 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||| | |||||| || || |||||||||| ||||||||||||||||| Sbjct: 2102 tacttgttgagaggagcatcaagtgcaaatctctttggcaaatctggattagc 2050
>dbj|AB104742.1| Pisum sativum PsOPR6 mRNA for hypothetical protein, complete cds Length = 1169 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | ||| |||||||||| |||||||||||||||| Sbjct: 1022 tacttgtttagaggagcattgagtgcaaatctctttggcaaatctggattag 971
>dbj|AB104741.1| Pisum sativum PsOPR4 mRNA for hypothetical protein, complete cds Length = 1344 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | ||| |||||||||| |||||||||||||||| Sbjct: 1022 tacttgtttagaggagcattgagtgcaaatctctttggcaaatctggattag 971
>dbj|AB095739.1| Pisum sativum OPR2 gene for 12-oxophytodienoic acid 10,11-reductase, complete cds Length = 2220 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| ||||| |||||||||| || ||||||||||||| Sbjct: 2105 tacttgttgagaggagcatcgagtgcaaatctctttggtaaatctggattag 2054
>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE Length = 141614 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| |||||| | |||||||| || ||||||||||||| Sbjct: 70796 tacttgttgagaggagcatcgagcgcgaatctctttggtaaatctggattag 70847
>gb|AF005237.1|AF005237 Catharanthus roseus old-yellow-enzyme homolog (CROYEH) mRNA, complete cds Length = 1170 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 143 cggtcgtacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggatt 198 |||| ||||||||| | |||||| | | |||||||||||| |||||||||||||| Sbjct: 1100 cggttgtacttgttgagaggagcattcaactcaaatctcttgggcaaatctggatt 1045
>dbj|AB044940.1| Pisum sativum OPDAR mRNA for 12-oxophytodienoic acid 10, 11-reductase, complete cds Length = 1399 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| ||||| |||||||||| || ||||||||||||| Sbjct: 1057 tacttgttgagaggagcatcgagtgcaaatctctttggtaaatctggattag 1006
>emb|AL513328.12| Human DNA sequence from clone RP13-461N9 on chromosome 9 Contains the 5' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and a ribosomal protein S21 (RPS21) pseudogene, complete sequence Length = 126999 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 aaaaattattacaattatataaacca 34 |||||||||| ||||||||||||||| Sbjct: 75922 aaaaattattccaattatataaacca 75897
>emb|CR450776.4| Zebrafish DNA sequence from clone DKEY-48J7 in linkage group 8, complete sequence Length = 126481 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 agaaaaaattattacaattata 27 |||||||||||||||||||||| Sbjct: 119252 agaaaaaattattacaattata 119231
>ref|NM_100809.3| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT1G09390 mRNA, complete cds Length = 1698 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 169 gagctcaaatctcttaggcaaatctggattagc 201 ||||||||| || ||||||||||| |||||||| Sbjct: 1456 gagctcaaaccttttaggcaaatcaggattagc 1488
>ref|NM_100810.1| Arabidopsis thaliana 12-oxophytodienoate reductase AT1G09400 mRNA, complete cds Length = 1093 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 169 gagctcaaatctcttaggcaaatctggattagc 201 ||||||||| || ||||||||||| |||||||| Sbjct: 997 gagctcaaaccttttaggcaaatcaggattagc 965
>gb|AC006028.3| Homo sapiens BAC clone GS1-165O14 from 7, complete sequence Length = 210608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 ttatataaaccaagcaaatcattaa 47 ||||||||||||| ||||||||||| Sbjct: 92524 ttatataaaccaaacaaatcattaa 92548
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 169 gagctcaaatctcttaggcaaatctggattagc 201 ||||||||| || ||||||||||| |||||||| Sbjct: 15300 gagctcaaaccttttaggcaaatcaggattagc 15332
>emb|X94105.1|CROYE C.rubrum mRNA for putative old yellow enzyme-NADPH dehydrogenase Length = 485 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||||| ||| || || || |||||||| | ||||||||||||||||| Sbjct: 224 tacttgttcagaggcgcatcaagttcaaatcttcttggcaaatctggattagc 172
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 catccacaatggccattcggg 371 ||||||||||||||||||||| Sbjct: 180196 catccacaatggccattcggg 180176
>ref|XM_691759.1| PREDICTED: Danio rerio similar to WD repeat and FYVE domain containing 3 isoform 2 (LOC568432), mRNA Length = 1623 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 gaatgctttcctgaagggcaagagc 328 ||||||||||||||||| ||||||| Sbjct: 1387 gaatgctttcctgaaggccaagagc 1411
>gb|AC012351.3|AC012351 Homo sapiens BAC clone CTD-2312I3 from 7p22, complete sequence Length = 150983 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 ttatataaaccaagcaaatcattaa 47 ||||||||||||| ||||||||||| Sbjct: 26265 ttatataaaccaaacaaatcattaa 26289
>emb|AL953869.12| Zebrafish DNA sequence from clone CH211-261J13 in linkage group 7, complete sequence Length = 171417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 aaaaaattattacaattatat 28 ||||||||||||||||||||| Sbjct: 13196 aaaaaattattacaattatat 13216
>dbj|AB104739.1| Pisum sativum PsOPR3 mRNA for hypothetical protein, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||| | |||||| || || |||||||||| || |||||||||||||| Sbjct: 1040 tacttgttgagaggagcatcaagtgcaaatctctttggtaaatctggattagc 988
>dbj|AB095740.1| Pisum sativum OPR3 gene for 12-oxophytodienoic acid 10,11-reductase, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattagc 201 |||||||| | |||||| || || |||||||||| || |||||||||||||| Sbjct: 2262 tacttgttgagaggagcatcaagtgcaaatctctttggtaaatctggattagc 2210
>dbj|AK117769.1| Arabidopsis thaliana At1g09400 mRNA for putative 12-oxophytodienoate reductase OPR1, complete cds, clone: RAFL17-45-F19 Length = 825 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 169 gagctcaaatctcttaggcaaatctggattagc 201 ||||||||| || ||||||||||| |||||||| Sbjct: 640 gagctcaaaccttttaggcaaatcaggattagc 608
>gb|AC004933.1|AC004933 Homo sapiens PAC clone RP5-952L21 from 7p22-p2, complete sequence Length = 124675 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 ttatataaaccaagcaaatcattaa 47 ||||||||||||| ||||||||||| Sbjct: 37271 ttatataaaccaaacaaatcattaa 37247
>dbj|D83970.1| Vigna unguiculata mRNA for CPRD8 protein, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 caaatctcttaggcaaatctggatt 198 |||||||||| |||||||||||||| Sbjct: 1048 caaatctctttggcaaatctggatt 1024
>ref|XM_635762.1| Dictyostelium discoideum hypothetical protein (DDB0204051), partial mRNA Length = 2715 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 agaaaaaattattacaattatata 29 |||||||| ||||||||||||||| Sbjct: 491 agaaaaaactattacaattatata 514
>gb|AC158162.13| Mus musculus chromosome 3, clone RP23-335E20, complete sequence Length = 206835 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tgagcagatgaactattcag 74 |||||||||||||||||||| Sbjct: 167797 tgagcagatgaactattcag 167778
>gb|AE000663.1|MMAE000663 Mus musculus TCR beta locus from bases 1 to 250611 (section 1 of 3) of the complete sequence Length = 250611 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tccttgatgcttgttgagtt 416 |||||||||||||||||||| Sbjct: 23154 tccttgatgcttgttgagtt 23135
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tgctttcctgaagggcaaga 326 |||||||||||||||||||| Sbjct: 22949 tgctttcctgaagggcaaga 22930
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gaaaaaattattacaattat 26 |||||||||||||||||||| Sbjct: 527578 gaaaaaattattacaattat 527559
>gb|AY265417.1| Cooperia oncophora mitochondrion, complete genome Length = 13636 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aaaaaattattacaattatataaa 31 |||||||||||||||||| ||||| Sbjct: 11731 aaaaaattattacaattaaataaa 11708
>ref|XM_712832.1| Candida albicans SC5314 putative NADH-dependent flavin oxidoreductase (CaO19_3234), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ggcaaatctggattagcaagaaag 208 ||||||||||||||||||| |||| Sbjct: 1028 ggcaaatctggattagcaataaag 1005
>ref|XM_712766.1| Candida albicans SC5314 putative NADH-dependent flavin oxidoreductase (CaO19_10744), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ggcaaatctggattagcaagaaag 208 ||||||||||||||||||| |||| Sbjct: 1028 ggcaaatctggattagcaataaag 1005
>gb|AC099597.6| Mus musculus chromosome 17, clone RP23-78K9, complete sequence Length = 272221 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gagccatcaaggaaaggata 99 |||||||||||||||||||| Sbjct: 102816 gagccatcaaggaaaggata 102797
>emb|CT010484.7| Mouse DNA sequence from clone RP23-296N14 on chromosome 17, complete sequence Length = 212827 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gagccatcaaggaaaggata 99 |||||||||||||||||||| Sbjct: 120369 gagccatcaaggaaaggata 120350
>gb|AC121885.3| Mus musculus BAC clone RP24-138N20 from chromosome 3, complete sequence Length = 155690 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tgagcagatgaactattcag 74 |||||||||||||||||||| Sbjct: 143858 tgagcagatgaactattcag 143877
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gagccatcaaggaaaggata 99 |||||||||||||||||||| Sbjct: 49427 gagccatcaaggaaaggata 49408
>emb|Z98303.1|HS140H19 Human DNA sequence from clone GS1-140H19 on chromosome Xq24-25, complete sequence Length = 16463 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aaattattacaattatataa 30 |||||||||||||||||||| Sbjct: 10659 aaattattacaattatataa 10640
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cctgaagggcaagagcctgt 332 |||||||||||||||||||| Sbjct: 204768 cctgaagggcaagagcctgt 204749
>emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 in linkage group 13, complete sequence Length = 89943 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaattattacaattatata 29 |||||||||||||||||||| Sbjct: 42455 aaaattattacaattatata 42474
>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 aagagcctgtggggtatctg 342 |||||||||||||||||||| Sbjct: 24430 aagagcctgtggggtatctg 24411
>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227751 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tccttgatgcttgttgagtt 416 |||||||||||||||||||| Sbjct: 197483 tccttgatgcttgttgagtt 197464
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cactttgttgccttcctttc 269 |||||||||||||||||||| Sbjct: 16004457 cactttgttgccttcctttc 16004438
>emb|BX571957.10| Zebrafish DNA sequence from clone DKEYP-117B4 in linkage group 18, complete sequence Length = 179945 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaaaaattattacaattata 27 |||||||||||||||||||| Sbjct: 82694 aaaaaattattacaattata 82713
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cactttgttgccttcctttc 269 |||||||||||||||||||| Sbjct: 85859 cactttgttgccttcctttc 85840
>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1, complete sequence Length = 207004 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaaaaattattacaattata 27 |||||||||||||||||||| Sbjct: 64019 aaaaaattattacaattata 64000
>gb|AY954368.1| Pisum sativum 12-oxophytodienoic acid 10,10-reductase (OPR1) mRNA, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | ||| |||||||||| || ||||||||||||| Sbjct: 1022 tacttgtttagaggagcattgagtgcaaatctctttggtaaatctggattag 971
>dbj|AB104738.1| Pisum sativum PsOPR1 mRNA for hypothetical protein, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | ||| |||||||||| || ||||||||||||| Sbjct: 1022 tacttgtttagaggagcattgagtgcaaatctctttggtaaatctggattag 971
>dbj|AB095738.1| Pisum sativum OPR1 gene for 12-oxophytodienoic acid 10, 11-reductase, complete cds Length = 4517 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | ||| |||||||||| || ||||||||||||| Sbjct: 4139 tacttgtttagaggagcattgagtgcaaatctctttggtaaatctggattag 4088
>emb|AJ242551.1|LES242551 Lycopersicon esculentum mRNA for 12-oxophytodienoate reductase (opr gene) Length = 1254 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 149 tacttgttcaaaggagcgtcgagctcaaatctcttaggcaaatctggattag 200 |||||||| | |||||| | |||||||||| ||| || ||||||||||||| Sbjct: 1162 tacttgttaagaggagcatttagctcaaatcgctttggtaaatctggattag 1111
>emb|CR626935.6| Zebrafish DNA sequence from clone CH211-81A5 in linkage group 19, complete sequence Length = 166134 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aaaaaattattacaattatataaa 31 ||||||||||||||||||| |||| Sbjct: 163213 aaaaaattattacaattatttaaa 163190
>gb|AC130693.15| Mus musculus chromosome 19, clone RP23-385G14, complete sequence Length = 184943 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gagccatcaaggaaaggata 99 |||||||||||||||||||| Sbjct: 16743 gagccatcaaggaaaggata 16762
>emb|AL731783.10| Mouse DNA sequence from clone RP23-124E18 on chromosome 2, complete sequence Length = 207209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aattattacaattatataaa 31 |||||||||||||||||||| Sbjct: 70960 aattattacaattatataaa 70941
>gb|AC161768.25| Mus musculus 6 BAC RP23-37C14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196068 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tccttgatgcttgttgagtt 416 |||||||||||||||||||| Sbjct: 57097 tccttgatgcttgttgagtt 57078 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,945,466 Number of Sequences: 3902068 Number of extensions: 3945466 Number of successful extensions: 74874 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74650 Number of HSP's gapped (non-prelim): 197 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
