ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast03b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predic... 78 2e-11
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
3dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
4tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 78 2e-11
5emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 78 2e-11
6ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predic... 70 6e-09
7emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 70 6e-09
8dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
9dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
10tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 70 6e-09
11emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 6e-09
12ref|XM_482738.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
13ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
14ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
16dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
17dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
18dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
19tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 60 6e-06
20tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 60 6e-06
21ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
22dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
23dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
24tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 54 4e-04
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
26dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
27emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 46 0.086
28ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM036... 44 0.34
29gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.34
30gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.34
31emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
32gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the... 42 1.3
33emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for a... 42 1.3
34ref|XM_549978.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
35gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 5.3
36gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete... 40 5.3
37gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete... 40 5.3
38ref|XM_417519.1| PREDICTED: Gallus gallus similar to Beta-1,4-ga... 40 5.3
39gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete se... 40 5.3
40gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic m... 40 5.3
41emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 40 5.3
42emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative ... 40 5.3
43gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, com... 40 5.3
44gb|AC137056.3| Homo sapiens chromosome 16 clone CTD-2194A8, comp... 40 5.3
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.3
47dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
48dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
49dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
50dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
51dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
52gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22... 40 5.3
53dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 40 5.3
54gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.3
55gb|U87832.1|OBU87832 Oat blue dwarf virus complete genome 40 5.3
56gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibit... 40 5.3
57gb|AC136876.2| Homo sapiens chromosome 16 clone CTD-2372O23, com... 40 5.3
58gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, comple... 40 5.3
59dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3 
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                       
Query: 318 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 377
           ||||||| |||||||||||||||||||||||||||||||||| ||  |  ||  ||||||
Sbjct: 969 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 910

                          
Query: 378 ggccatggacttggc 392
           | |||||||||||||
Sbjct: 909 gaccatggacttggc 895
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 318      gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 377
                ||||||| |||||||||||||||||||||||||||||||||| ||  |  ||  ||||||
Sbjct: 35250654 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 35250713

                               
Query: 378      ggccatggacttggc 392
                | |||||||||||||
Sbjct: 35250714 gaccatggacttggc 35250728



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 317      tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
                |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 35242527 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 35242573



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 316      ctgaagcagttgcggcggatctcgccgacgttcc 349
                ||||||||| ||||||||||||||||||||||||
Sbjct: 35280772 ctgaagcagctgcggcggatctcgccgacgttcc 35280805



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 316      ctgaagcagttgcggcggatctcgccgacgttcc 349
                ||||||||| ||||||||||||||||||||||||
Sbjct: 35258058 ctgaagcagctgcggcggatctcgccgacgttcc 35258091



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 324      gttgcggcggatctcgccgacgttccc 350
                |||||||||||||||||||||||||||
Sbjct: 35227653 gttgcggcggatctcgccgacgttccc 35227679



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 268     tcctcgccggcctcgacgacg 288
               |||||||||||||||||||||
Sbjct: 9331947 tcctcgccggcctcgacgacg 9331967
to top
>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full
            insert sequence
          Length = 1385

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 377
            ||||||| |||||||||||||||||||||||||||||||||| ||  |  ||  ||||||
Sbjct: 1100 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1041

                           
Query: 378  ggccatggacttggc 392
            | |||||||||||||
Sbjct: 1040 gaccatggacttggc 1026
to top
>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for
            class III peroxidase 62 precursor, exons 1-2
          Length = 1186

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                        
Query: 318  gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 377
            ||||||| |||||||||||||||||||||||||||||||||| ||  |  ||  ||||||
Sbjct: 1096 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1037

                           
Query: 378  ggccatggacttggc 392
            | |||||||||||||
Sbjct: 1036 gaccatggacttggc 1022
to top
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 318   gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 377
             ||||||| |||||||||||||||||||||||||||||||||| ||  |  ||  ||||||
Sbjct: 46499 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 46558

                            
Query: 378   ggccatggacttggc 392
             | |||||||||||||
Sbjct: 46559 gaccatggacttggc 46573



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 317   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 38372 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 38418



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 316   ctgaagcagttgcggcggatctcgccgacgttcc 349
             ||||||||| ||||||||||||||||||||||||
Sbjct: 76617 ctgaagcagctgcggcggatctcgccgacgttcc 76650



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 316   ctgaagcagttgcggcggatctcgccgacgttcc 349
             ||||||||| ||||||||||||||||||||||||
Sbjct: 53903 ctgaagcagctgcggcggatctcgccgacgttcc 53936



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 324   gttgcggcggatctcgccgacgttccc 350
             |||||||||||||||||||||||||||
Sbjct: 23498 gttgcggcggatctcgccgacgttccc 23524
to top
>ref|XM_474448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 317 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
           |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 964 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 918
to top
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 317   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 82573 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 82527



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 316   ctgaagcagttgcggcggatctcgccgacgttcc 349
             ||||||||| ||||||||||||||||||||||||
Sbjct: 75769 ctgaagcagctgcggcggatctcgccgacgttcc 75736



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 316   ctgaagcagttgcggcggatctcgccgacgttcc 349
             ||||||||| ||||||||||||||||||||||||
Sbjct: 72462 ctgaagcagctgcggcggatctcgccgacgttcc 72429



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 324   gttgcggcggatctcgccgacgttccc 350
             |||||||||||||||||||||||||||
Sbjct: 85819 gttgcggcggatctcgccgacgttccc 85793
to top
>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full
            insert sequence
          Length = 1299

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 317  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1053 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1007
to top
>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full
            insert sequence
          Length = 1333

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 317  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1054 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1008
to top
>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for
            class III peroxidase 61, exons 1-2
          Length = 1178

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 317  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1119 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1073
to top
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 317   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 363
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 74474 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 74520



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 316   ctgaagcagttgcggcggatctcgccgacgttcc 349
             ||||||||| ||||||||||||||||||||||||
Sbjct: 81278 ctgaagcagctgcggcggatctcgccgacgttcc 81311



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 324   gttgcggcggatctcgccgacgttccc 350
             |||||||||||||||||||||||||||
Sbjct: 71228 gttgcggcggatctcgccgacgttccc 71254
to top
>ref|XM_482738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 334 atctcgccgacgttcccgccgggcctcggc 363
           ||||||||||||||||||||||||||||||
Sbjct: 231 atctcgccgacgttcccgccgggcctcggc 202
to top
>ref|XM_474454.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1017

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 316 ctgaagcagttgcggcggatctcgccgacgttcc 349
           ||||||||| ||||||||||||||||||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcc 917
to top
>ref|XM_474450.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 316 ctgaagcagttgcggcggatctcgccgacgttcc 349
           ||||||||| ||||||||||||||||||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcc 917
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                              
Query: 334      atctcgccgacgttcccgccgggcctcggc 363
                ||||||||||||||||||||||||||||||
Sbjct: 22269513 atctcgccgacgttcccgccgggcctcggc 22269484
to top
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0048G02
          Length = 155542

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                           
Query: 334   atctcgccgacgttcccgccgggcctcggc 363
             ||||||||||||||||||||||||||||||
Sbjct: 85889 atctcgccgacgttcccgccgggcctcggc 85860
to top
>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full
            insert sequence
          Length = 1240

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 316  ctgaagcagttgcggcggatctcgccgacgttcc 349
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1016 ctgaagcagctgcggcggatctcgccgacgttcc 983
to top
>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full
           insert sequence
          Length = 2256

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 316 ctgaagcagttgcggcggatctcgccgacgttcc 349
           ||||||||| ||||||||||||||||||||||||
Sbjct: 975 ctgaagcagctgcggcggatctcgccgacgttcc 942
to top
>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for
            class III peroxidase 64 precursor, exons 1-2
          Length = 1091

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 316  ctgaagcagttgcggcggatctcgccgacgttcc 349
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1024 ctgaagcagctgcggcggatctcgccgacgttcc 991
to top
>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for
            class III peroxidase 63 precursor, exons 1-2
          Length = 1098

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 316  ctgaagcagttgcggcggatctcgccgacgttcc 349
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1040 ctgaagcagctgcggcggatctcgccgacgttcc 1007
to top
>ref|XM_474445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 324 gttgcggcggatctcgccgacgttccc 350
           |||||||||||||||||||||||||||
Sbjct: 975 gttgcggcggatctcgccgacgttccc 949
to top
>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full
            insert sequence
          Length = 1413

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 324  gttgcggcggatctcgccgacgttccc 350
            |||||||||||||||||||||||||||
Sbjct: 1078 gttgcggcggatctcgccgacgttccc 1052
to top
>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full
            insert sequence
          Length = 3800

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 324  gttgcggcggatctcgccgacgttccc 350
            |||||||||||||||||||||||||||
Sbjct: 3566 gttgcggcggatctcgccgacgttccc 3540
to top
>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for
            class III peroxidase 60 precursor, exons 1-3
          Length = 1221

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 324  gttgcggcggatctcgccgacgttccc 350
            |||||||||||||||||||||||||||
Sbjct: 1149 gttgcggcggatctcgccgacgttccc 1123
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 334     atctcgccgacgttcccgccgggcctcggc 363
               |||||||||||||||| |||||||||||||
Sbjct: 8721819 atctcgccgacgttcctgccgggcctcggc 8721848
to top
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0057D11
          Length = 190790

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 334    atctcgccgacgttcccgccgggcctcggc 363
              |||||||||||||||| |||||||||||||
Sbjct: 151615 atctcgccgacgttcctgccgggcctcggc 151644
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 300   gcgcagggcgttggggctgaagc 322
             |||||||||||||||||||||||
Sbjct: 20456 gcgcagggcgttggggctgaagc 20478
to top
>ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM03652.1) partial mRNA
          Length = 1404

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 279 ctcgacgacggtgtcgatggcg 300
           ||||||||||||||||||||||
Sbjct: 174 ctcgacgacggtgtcgatggcg 195
to top
>gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 188
            of 460 of the complete genome
          Length = 10801

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 287  cggtgtcgatggcgcgcagggc 308
            ||||||||||||||||||||||
Sbjct: 9466 cggtgtcgatggcgcgcagggc 9487
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     cggtgtcgatggcgcgcagggc 308
               ||||||||||||||||||||||
Sbjct: 2961888 cggtgtcgatggcgcgcagggc 2961867
to top
>emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0043H09,
             complete sequence
          Length = 88824

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   tcctcgccggcctcgacgacg 288
             |||||||||||||||||||||
Sbjct: 15318 tcctcgccggcctcgacgacg 15338
to top
>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 279  ctcgacgacggtgtcgatggcgcgc 303
            ||||||| |||||||||||||||||
Sbjct: 1337 ctcgacggcggtgtcgatggcgcgc 1361
to top
>emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for amino acid binding protein
          Length = 1242

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 279 ctcgacgacggtgtcgatggcgcgc 303
           ||||||| |||||||||||||||||
Sbjct: 192 ctcgacggcggtgtcgatggcgcgc 168
to top
>ref|XM_549978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    acacgcacacacgcgagcag 184
              ||||||||||||||||||||
Sbjct: 469966 acacgcacacacgcgagcag 469947
to top
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence
          Length = 164973

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     gaaactagtttgaatctggtccaa 35
              |||||||| |||||||||||||||
Sbjct: 104014 gaaactaggttgaatctggtccaa 104037
to top
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence
          Length = 214621

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    gaaactagtttgaatctggtccaa 35
             |||||||| |||||||||||||||
Sbjct: 27679 gaaactaggttgaatctggtccaa 27702
to top
>ref|XM_417519.1| PREDICTED: Gallus gallus similar to Beta-1,4-galactosyltransferase
           5 (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 5) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 5) (Beta-1,4-GalT II)...
           (LOC419358), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 ttcccgccgggcctcggcgc 365
           ||||||||||||||||||||
Sbjct: 37  ttcccgccgggcctcggcgc 56
to top
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence
          Length = 127640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaattggtttgaaactagtttga 24
             ||||||||||| ||||||||||||
Sbjct: 83801 aaaattggtttaaaactagtttga 83778
to top
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis
             gene cluster, partial sequence
          Length = 103450

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   gccgggcctcggcgcggtgg 370
             ||||||||||||||||||||
Sbjct: 22292 gccgggcctcggcgcggtgg 22273
to top
>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cttcctcctcgccggcctcg 282
            ||||||||||||||||||||
Sbjct: 2721 cttcctcctcgccggcctcg 2740
to top
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor
          Length = 17385

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  cttcctcctcgccggcctcg 282
            ||||||||||||||||||||
Sbjct: 3570 cttcctcctcgccggcctcg 3589
to top
>gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, complete sequence
          Length = 101561

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aaattaatagctaacataca 204
             ||||||||||||||||||||
Sbjct: 62817 aaattaatagctaacataca 62798
to top
>gb|AC137056.3| Homo sapiens chromosome 16 clone CTD-2194A8, complete sequence
          Length = 131451

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aaattaatagctaacataca 204
             ||||||||||||||||||||
Sbjct: 47360 aaattaatagctaacataca 47341
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     cttcctcctcgccggcctcg 282
               ||||||||||||||||||||
Sbjct: 1353708 cttcctcctcgccggcctcg 1353689



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     cttcctcctcgccggcctcg 282
               ||||||||||||||||||||
Sbjct: 1347659 cttcctcctcgccggcctcg 1347640
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     ctcgccggcctcgacgacgg 289
               ||||||||||||||||||||
Sbjct: 4380189 ctcgccggcctcgacgacgg 4380170
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 353     cgggcctcggcgcggtggcgagct 376
               ||||||||||||||| ||||||||
Sbjct: 1082965 cgggcctcggcgcggcggcgagct 1082942
to top
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   cttcctcctcgccggcctcg 282
             ||||||||||||||||||||
Sbjct: 51759 cttcctcctcgccggcctcg 51740



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   cttcctcctcgccggcctcg 282
             ||||||||||||||||||||
Sbjct: 45710 cttcctcctcgccggcctcg 45691
to top
>dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D09, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
to top
>dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G03, full
           insert sequence
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
to top
>dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H09, full
           insert sequence
          Length = 1072

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 63  cttcctcctcgccggcctcg 82
to top
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete
              sequence
          Length = 280095

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     gaaactagtttgaatctggtccaa 35
              |||||||| |||||||||||||||
Sbjct: 240193 gaaactaggttgaatctggtccaa 240170
to top
>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 44  cttcctcctcgccggcctcg 63
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     gcggcggatctcgccgacgt 346
               ||||||||||||||||||||
Sbjct: 2397794 gcggcggatctcgccgacgt 2397813
to top
>gb|U87832.1|OBU87832 Oat blue dwarf virus complete genome
          Length = 6509

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  ccttcctcctcgccggcctc 281
            ||||||||||||||||||||
Sbjct: 1277 ccttcctcctcgccggcctc 1296
to top
>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cttcctcctcgccggcctcg 282
           ||||||||||||||||||||
Sbjct: 21  cttcctcctcgccggcctcg 40
to top
>gb|AC136876.2| Homo sapiens chromosome 16 clone CTD-2372O23, complete sequence
          Length = 73074

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   aaattaatagctaacataca 204
             ||||||||||||||||||||
Sbjct: 42559 aaattaatagctaacataca 42578
to top
>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome
          Length = 149696

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 252   agccgtgaatccttcctcctcgccggcc 279
             |||| ||||||||||||||||| |||||
Sbjct: 83746 agccttgaatccttcctcctcgacggcc 83773
to top
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cttcctcctcgccggcctcg 282
            ||||||||||||||||||||
Sbjct: 3329 cttcctcctcgccggcctcg 3310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,482,120
Number of Sequences: 3902068
Number of extensions: 3482120
Number of successful extensions: 72864
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72013
Number of HSP's gapped (non-prelim): 851
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top