>emb|AL033375.2|HS21F7 Human DNA sequence from clone RP1-21F7 on chromosome 6q16.1-21 Contains
              the 5' end of the gene for a novel protein (KIAA1900) and a
              CpG island, complete sequence
          Length = 150789

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 205    gaaatcacaaagcaatcaagca 226
              ||||||||||||||||||||||
Sbjct: 130923 gaaatcacaaagcaatcaagca 130902

>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 4/11
          Length = 346406

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 97    caaaaataacagggcacacagg 118
             ||||||||||||||||||||||
Sbjct: 20414 caaaaataacagggcacacagg 20435

>emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 189495

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 68    caaaaacactgaaccacacagc 89
             ||||||||||||||||||||||
Sbjct: 21193 caaaaacactgaaccacacagc 21214

>ref|NM_113643.1| Arabidopsis thaliana unknown protein AT3G27290 mRNA, complete cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 caggcaaacccacaaaatca 134
           ||||||||||||||||||||
Sbjct: 368 caggcaaacccacaaaatca 349

>ref|XM_532274.2| PREDICTED: Canis familiaris hypothetical LOC475039 (LOC475039), mRNA
          Length = 2181

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  acaccagccaacagaagaac 331
            ||||||||||||||||||||
Sbjct: 2042 acaccagccaacagaagaac 2061

>emb|AL157827.17| Human DNA sequence from clone RP11-19J3 on chromosome 9q21.33-22.31
            Contains the 5' end of the ASPN gene for asporin (LRR
            class 1), the ECM2 gene for female organ and adipocyte
            specific extracellular matrix protein 2, a pseudogene
            similar to part of cytochrome c oxidase I (MTCO1), the 3'
            end of a novel gene, the 3' end of the C9orf12 gene and a
            CpG island, complete sequence
          Length = 167734

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 252  tgaacttttcattgccatttcatt 275
            ||||||||||| ||||||||||||
Sbjct: 1954 tgaacttttcagtgccatttcatt 1977

>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32 Contains
              part of a novel gene, the OGN gene for osteoglycin
              (osteoinductive factor, mimecan), the OMD gene for
              osteomodulin, the ASPN gene for asporin (LRR class 1) and
              the 3' end of the ECM2 gene for extracellular matrix
              protein 2 (female organ and adipocyte specific), complete
              sequence
          Length = 152341

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    tgaacttttcattgccatttcatt 275
              ||||||||||| ||||||||||||
Sbjct: 125069 tgaacttttcagtgccatttcatt 125092

>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence
          Length = 202933

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 94     aaacaaaaataacagggcacacaggcaa 121
              ||||||||| |||| |||||||||||||
Sbjct: 121021 aaacaaaaaaaacaaggcacacaggcaa 121048

>gb|AY060566.1| Arabidopsis thaliana AT3g27290/K17E12_11 mRNA, complete cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 caggcaaacccacaaaatca 134
           ||||||||||||||||||||
Sbjct: 368 caggcaaacccacaaaatca 349

>dbj|AK221663.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL09-70-M16
          Length = 1905

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 caggcaaacccacaaaatca 134
           ||||||||||||||||||||
Sbjct: 368 caggcaaacccacaaaatca 349

>gb|BT006347.1| Arabidopsis thaliana At3g27290/K17E12_11 gene, complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 caggcaaacccacaaaatca 134
           ||||||||||||||||||||
Sbjct: 100 caggcaaacccacaaaatca 81

>gb|AC069130.6|AC069130 Homo sapiens BAC clone RP11-468D10 from Y, complete sequence
          Length = 66874

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    aacattgtacaggcatggggaaaa 61
             |||||||||||| |||||||||||
Sbjct: 13089 aacattgtacagacatggggaaaa 13066

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gctagcaaacaaaaataaca 107
              ||||||||||||||||||||
Sbjct: 328493 gctagcaaacaaaaataaca 328474

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       accacacagctagcaaacaa 99
                ||||||||||||||||||||
Sbjct: 38596417 accacacagctagcaaacaa 38596436

>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence
          Length = 224908

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   gttcaacccccatcactgca 173
             ||||||||||||||||||||
Sbjct: 34998 gttcaacccccatcactgca 34979

>gb|AC018474.31| Homo sapiens 12 BAC RP11-757E18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172303

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    agcaaacaaaaataacaggg 110
             ||||||||||||||||||||
Sbjct: 48374 agcaaacaaaaataacaggg 48355

>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     accacacagctagcaaacaa 99
              ||||||||||||||||||||
Sbjct: 189498 accacacagctagcaaacaa 189517

>gb|AC092600.2| Homo sapiens BAC clone RP11-119J12 from 2, complete sequence
          Length = 53336

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  cagggcacacaggcaaaccc 125
            ||||||||||||||||||||
Sbjct: 9032 cagggcacacaggcaaaccc 9051

>gb|AC015978.4|AC015978 Homo sapiens BAC clone RP11-529I21 from Y, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    aacattgtacaggcatggggaaaa 61
             |||||||||||| |||||||||||
Sbjct: 60255 aacattgtacagacatggggaaaa 60278

>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434C04
          Length = 150064

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     accacacagctagcaaacaa 99
              ||||||||||||||||||||
Sbjct: 117098 accacacagctagcaaacaa 117117

>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    accacacagctagcaaacaa 99
             ||||||||||||||||||||
Sbjct: 54390 accacacagctagcaaacaa 54409

>emb|BX682229.4| Mouse DNA sequence from clone RP24-531M17 on chromosome 2, complete
             sequence
          Length = 57881

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tctaacagagccaaaagctc 22
             ||||||||||||||||||||
Sbjct: 42759 tctaacagagccaaaagctc 42778

>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12
          Length = 63604

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   caggcaaacccacaaaatca 134
             ||||||||||||||||||||
Sbjct: 45035 caggcaaacccacaaaatca 45054

>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y
          Length = 1351786

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     aacattgtacaggcatggggaaaa 61
              |||||||||||| |||||||||||
Sbjct: 899379 aacattgtacagacatggggaaaa 899356

>emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chromosome 17, complete
              sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gttcaacccccatcactgca 173
              ||||||||||||||||||||
Sbjct: 109727 gttcaacccccatcactgca 109708

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gctagcaaacaaaaataaca 107
              ||||||||||||||||||||
Sbjct: 328493 gctagcaaacaaaaataaca 328474

>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gctagcaaacaaaaataaca 107
             ||||||||||||||||||||
Sbjct: 61544 gctagcaaacaaaaataaca 61525


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,852,306
Number of Sequences: 3902068
Number of extensions: 3852306
Number of successful extensions: 92241
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92123
Number of HSP's gapped (non-prelim): 118
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)