| Clone Name | rbast02h04 |
|---|---|
| Clone Library Name | barley_pub |
>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Length = 494 Score = 68.9 bits (167), Expect = 5e-12 Identities = 31/42 (73%), Positives = 40/42 (95%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELD 327 AYTMPADA+H+ VLR+VIREDF+R+LA+RL+ADI+KV+ ELD Sbjct: 403 AYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELD 444
>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)| Length = 502 Score = 68.6 bits (166), Expect = 7e-12 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 13/98 (13%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELDAH----AVHAIKLST--X 291 AYTMP DAEH+AVLR+VIREDF+ SLA+RL++DI K++ ELD A++++ Sbjct: 405 AYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTAEEV 464 Query: 290 XXXXXXXXXXXXXXATEAFKD-------LAGKKKAGVC 198 E KD +AGKK +GVC Sbjct: 465 RDDKGDGLHHFHMDTVETQKDIIKHWRKIAGKKTSGVC 502
>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)| Length = 502 Score = 64.3 bits (155), Expect = 1e-10 Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 3/54 (5%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELD---AHAVHAIKL 300 AYTMP +A+H+ VLR+VIREDF+R+LA+RL+ DI KV+ ELD + +H I L Sbjct: 404 AYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKISL 457
>DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 500 Score = 62.8 bits (151), Expect = 4e-10 Identities = 28/42 (66%), Positives = 37/42 (88%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELD 327 AYTMP +A+H+ VLR+VIREDF+R+LA+RL+ DI KV+ ELD Sbjct: 404 AYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELD 445
>DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 466 Score = 32.0 bits (71), Expect = 0.74 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELD-AHAVH 312 AY +P + E+ + R+VIR DF ++A + D+ + I L+ AH ++ Sbjct: 406 AYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIEALNKAHILY 453
>DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)| Length = 466 Score = 31.6 bits (70), Expect = 0.97 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -1 Query: 452 AYTMPADAEHVAVLRIVIREDFNRSLAQRLLADINKVIGELD 327 AY +P + E+ + R+VIR DF ++A + D+ + I L+ Sbjct: 406 AYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIDALN 447
>GCKR_HUMAN (Q14397) Glucokinase regulatory protein (Glucokinase regulator)| Length = 625 Score = 30.4 bits (67), Expect = 2.2 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 150 HVYVVSWSTIIILYVRTRIACILSFGS 70 HVY+V W T+ I+ + + CI +FG+ Sbjct: 329 HVYLVGWQTLGIIAIMDGVECIHTFGA 355
>EZY1_CHLRE (Q08354) Ezy-1 protein precursor| Length = 453 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +3 Query: 183 ANKPSAYSGLLLPRQVLEG-LGGGVDRALTR 272 A P Y L L R +L G GGGVD ALTR Sbjct: 342 AMAPRQYRALALVRMILPGKTGGGVDGALTR 372
>EZY2_CHLRE (Q08355) Ezy-1 protein precursor| Length = 456 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +3 Query: 183 ANKPSAYSGLLLPRQVLEG-LGGGVDRALTR 272 A P Y L L R +L G GGGVD ALTR Sbjct: 345 AMAPRQYRALALVRMILPGKTGGGVDGALTR 375
>MLO4_ARATH (O23693) MLO-like protein 4 (AtMlo4)| Length = 573 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 175 LALSFITYSRLCCILEYHNYFVRTYADCLHSLFRLCW 65 L L F+T L +H Y VRT D H + + W Sbjct: 244 LRLGFLTKHNLPFTYNFHMYMVRTMEDEFHGIVGISW 280
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 142 CCILEYHNYFVRTYADCLHSLFRLCWACGYVS 47 CC +H F T+ C H RLC ACG ++ Sbjct: 594 CCSRCHHGLF-NTHWRCSHCSHRLCVACGRIA 624
>HAIR_RAT (P97609) Protein hairless| Length = 1181 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 142 CCILEYHNYFVRTYADCLHSLFRLCWACGYVS 47 CC +H F T+ C H RLC ACG ++ Sbjct: 593 CCSRCHHGLF-NTHWRCSHCSHRLCVACGRIA 623
>PAR3_CAEEL (Q17353) Partitioning defective protein 3 (Abnormal embryonic| partitioning of cytoplasm protein 3) Length = 1379 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 40 KKQIHNHMP-SRAERENASNPRTYVQNNYGTPRYNIDVNT**RTEQASQQTSLQH 201 K Q N P S ++ + S PR+ Q NY +P +D+ T T AS T+ Q+ Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPT---TAAASASTNSQN 937 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,894,716 Number of Sequences: 219361 Number of extensions: 826230 Number of successful extensions: 2421 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2418 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)