ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast02g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY641433.1| Triticum aestivum eukaryotic translation initiati... 329 3e-87
2ref|XM_468182.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-30
3ref|XM_507016.1| PREDICTED Oryza sativa (japonica cultivar-group... 141 2e-30
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
5dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
6dbj|AK103497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
7dbj|AK060351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
8gb|AY107832.1| Zea mays PCO079325 mRNA sequence 133 4e-28
9gb|BT019012.1| Zea mays clone Contig505.F mRNA sequence 125 1e-25
10gb|BT014055.1| Lycopersicon esculentum clone 133153F, mRNA sequence 82 1e-12
11gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete s... 58 2e-05
12ref|NM_111973.2| Arabidopsis thaliana EIF3G1; RNA binding / tran... 44 0.28
13emb|AJ293728.1|ATH293728 Arabidopsis thaliana partial mRNA for t... 44 0.28
14gb|AY133625.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, comp... 44 0.28
15gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, comple... 44 0.28
16gb|AY074582.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, comp... 44 0.28
17gb|AF428308.1|AF428308 Arabidopsis thaliana AT3g11400/F24K9_7 mR... 44 0.28
18dbj|AK220979.1| Arabidopsis thaliana mRNA for eukaryotic transla... 44 0.28
19emb|BX824210.1|CNS0A5OW Arabidopsis thaliana Full-length cDNA Co... 44 0.28
20emb|BX822827.1|CNS0A5UP Arabidopsis thaliana Full-length cDNA Co... 44 0.28
21emb|BX822539.1|CNS0A5TQ Arabidopsis thaliana Full-length cDNA Co... 44 0.28
22gb|AF291712.1|AF291712 Arabidopsis thaliana initiation factor 3g... 44 0.28
23gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24... 44 0.28
24gb|AY087887.1| Arabidopsis thaliana clone 39231 mRNA, complete s... 44 0.28
25emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on ch... 42 1.1
26gb|AC108518.3| Homo sapiens BAC clone RP11-699F8 from 4, complet... 42 1.1
27gb|AC021216.6| Homo sapiens BAC clone RP11-497K18 from 4, comple... 42 1.1
28gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 42 1.1
29gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, comple... 42 1.1
30gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome... 40 4.4
31ref|XM_468181.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
32gb|BT020011.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp... 40 4.4
33gb|BT020010.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp... 40 4.4
34ref|XM_369863.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.4
35gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complet... 40 4.4
36ref|XM_981023.1| PREDICTED: Mus musculus similar to Polyadenylat... 40 4.4
37ref|XM_909287.2| PREDICTED: Mus musculus similar to Polyadenylat... 40 4.4
38ref|XM_001005006.1| PREDICTED: Mus musculus similar to Polyadeny... 40 4.4
39gb|BC039299.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp... 40 4.4
40gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome... 40 4.4
41emb|AL137797.9| Human DNA sequence from clone RP5-1109J22 on chr... 40 4.4
42emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 4.4
43gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosom... 40 4.4
44dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 4.4
45emb|CR536512.1| Homo sapiens full open reading frame cDNA clone ... 40 4.4
46gb|AY888342.1| Synthetic construct Homo sapiens clone FLH020107.... 40 4.4
47gb|AY888341.1| Synthetic construct Homo sapiens clone FLH020106.... 40 4.4
48gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complet... 40 4.4
49gb|BC002987.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp... 40 4.4
50ref|NM_006819.1| Homo sapiens stress-induced-phosphoprotein 1 (H... 40 4.4
51dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.4
52dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.4
53dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 4.4
54dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.4
55emb|AL591542.20| Mouse DNA sequence from clone RP23-321M14 on ch... 40 4.4
56gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 4.4
57gb|M86752.1|HUMIEF Human transformation-sensitive protein (IEF S... 40 4.4
58emb|AJ415105.1|HSA415105 Homo sapiens partial IGVL7b gene for im... 40 4.4
59dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 4.4 
>gb|AY641433.1| Triticum aestivum eukaryotic translation initiation factor 3
           subunit g mRNA, partial cds
          Length = 455

 Score =  329 bits (166), Expect = 3e-87
 Identities = 301/340 (88%), Gaps = 7/340 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaaaacttgatgaaatataaactcaagt-ccagtccttacggaattcactttttggcca 59
           ||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||||  |||
Sbjct: 434 acaaagcttgatgaaatataaactcaagtgccatcccttaagaaattcactttttcacca 375

                                                                       
Query: 60  aacagagtgttgttattctcaacaaggcaaaacaagacacaagtttacgacaaaaa-gaa 118
             |||||||| ||||||||||||||||||||||| |||||||| | |||||| ||| | |
Sbjct: 374 c-cagagtgtagttattctcaacaaggcaaaacatgacacaagctcacgacacaaacgta 316

                                                                       
Query: 119 ctgataatgcggagagcataaccat--gacacttg--ggatatctgaatgcttagtaggc 174
           | | || | |||||| |||||  ||  ||||||||  ||| ||||| |||||||||||||
Sbjct: 315 cgggtatttcggagaccataatgatacgacacttgtaggaaatctggatgcttagtaggc 256

                                                                       
Query: 175 agtaactaagtaggtctaggggcagccatctccacatggaggataaggttatcataacca 234
           |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 255 agtaactaagtaggcctaggtgcagccatctccacatggaggatgaggttatcataacca 196

                                                                       
Query: 235 tacccattgagcttgctgatggccttctcagcgtcctccttggggacaaagttgacaaaa 294
           ||||||||||||||||||||||||||||| ||||||||| || | |||||||||||||| 
Sbjct: 195 tacccattgagcttgctgatggccttctcggcgtcctccctgtgaacaaagttgacaaac 136

                                                   
Query: 295 ccgaagcccctgctcattccagtcttctgatccaccgcga 334
           || |||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccaaagcccctgctcattccagtcttctgatccaccgcga 96
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>ref|XM_468182.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1150

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 214 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 930 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 871

                                                                      
Query: 274 ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
            || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 870 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 812
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>ref|XM_507016.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.22
           mRNA
          Length = 1154

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 214 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 946 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 887

                                                                      
Query: 274 ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
            || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 886 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 828
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                            
Query: 214      aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
                ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 33514048 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 33513989

                                                                           
Query: 274      ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
                 || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 33513988 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 33513930



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 214      aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
                ||||| ||| |||| || ||||| |||||||||||   ||||||| |||| |||||||||
Sbjct: 33511328 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 33511269
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                         
Query: 214   aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
             ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 88923 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 88864

                                                                        
Query: 274   ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
              || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 88863 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 88805



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 214   aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
             ||||| ||| |||| || ||||| |||||||||||   ||||||| |||| |||||||||
Sbjct: 86203 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 86144
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>dbj|AK103497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131A11, full
           insert sequence
          Length = 1154

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 214 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 946 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 887

                                                                      
Query: 274 ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
            || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 886 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 828
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>dbj|AK060351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F12, full
           insert sequence
          Length = 1150

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 214 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| 
Sbjct: 930 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 871

                                                                      
Query: 274 ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccgc 332
            || | ||||||||||| || ||||| ||||||||   |||||||||||||||||||||
Sbjct: 870 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgc 812
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>gb|AY107832.1| Zea mays PCO079325 mRNA sequence
          Length = 1165

 Score =  133 bits (67), Expect = 4e-28
 Identities = 109/123 (88%)
 Strand = Plus / Minus

                                                                       
Query: 212 ggaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcct 271
           ||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 911 ggaggataaggttgtcataaccatacccgttgagcttgttgatggccttctcggcgtcct 852

                                                                       
Query: 272 ccttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccg 331
           |  || | |||||||||||||| || || |||||||||   |||||||||||||||||||
Sbjct: 851 ctctgtgaacaaagttgacaaacccaaaccccctgctcgacccagtcttctgatccaccg 792

              
Query: 332 cga 334
           |||
Sbjct: 791 cga 789
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>gb|BT019012.1| Zea mays clone Contig505.F mRNA sequence
          Length = 1140

 Score =  125 bits (63), Expect = 1e-25
 Identities = 108/123 (87%)
 Strand = Plus / Minus

                                                                       
Query: 212 ggaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcct 271
           ||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 885 ggaggataaggttgtcataaccatacccgttgagcttgttgatggccttctcggcgtcct 826

                                                                       
Query: 272 ccttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatccaccg 331
           |  || | |||||||| ||||| || || |||||||||   |||||||||||||||||||
Sbjct: 825 ctctgtgaacaaagttcacaaacccaaaccccctgctcgacccagtcttctgatccaccg 766

              
Query: 332 cga 334
           |||
Sbjct: 765 cga 763
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>gb|BT014055.1| Lycopersicon esculentum clone 133153F, mRNA sequence
          Length = 1126

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcataaccatacccattgagcttgctgatggccttctcagcgtcctccttggggacaaag 285
           ||||||||||| |||||||||||| | |||||| ||||||| || ||  ||  |||||||
Sbjct: 920 tcataaccataaccattgagcttgtttatggccctctcagcatcttctctgttgacaaag 861

                                                    
Query: 286 ttgacaaaaccgaagcccctgctcattccagtcttctgatc 326
           ||||||||||| || || ||||||||||| ||||| |||||
Sbjct: 860 ttgacaaaaccaaatcctctgctcattcccgtcttttgatc 820
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>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence
          Length = 144306

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                          
Query: 214    aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
              ||||| || ||||| || ||||| |||||||| ||| |||| ||| ||| ||| || |||
Sbjct: 102930 aggatgagattatcgtagccatatccattgagtttgttgatagccctctgagcatcttcc 102871

                                                                   
Query: 274    ttggggacaaagttgacaaaaccgaagcccctgctcattccagtcttctgatc 326
               ||   |||||||||||||| || |||||||| ||||| |||||||| |||||
Sbjct: 102870 ctgctaacaaagttgacaaagccaaagcccctactcatgccagtcttttgatc 102818
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>ref|NM_111973.2| Arabidopsis thaliana EIF3G1; RNA binding / translation initiation
            factor AT3G11400 (EIF3G1) mRNA, complete cds
          Length = 1196

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 213  gaggataaggttatcataaccatacccatt 242
            |||||| ||||||||||||||||| |||||
Sbjct: 1000 gaggatgaggttatcataaccataaccatt 971
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>emb|AJ293728.1|ATH293728 Arabidopsis thaliana partial mRNA for translation initiation factor
           3, subunit g (eIF3g gene)
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 912 gaggatgaggttatcataaccataaccatt 883
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>gb|AY133625.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds
          Length = 885

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 852 gaggatgaggttatcataaccataaccatt 823
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>gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, complete sequence
          Length = 191468

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 80     aacaaggcaaaacaagacacaa 101
              ||||||||||||||||||||||
Sbjct: 176043 aacaaggcaaaacaagacacaa 176064
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>gb|AY074582.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 924 gaggatgaggttatcataaccataaccatt 895
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>gb|AF428308.1|AF428308 Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds
          Length = 1124

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 927 gaggatgaggttatcataaccataaccatt 898
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>dbj|AK220979.1| Arabidopsis thaliana mRNA for eukaryotic translation initiation
           factor 3 subunit like protein, complete cds, clone:
           RAFL22-58-D06
          Length = 517

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 271 gaggatgaggttatcataaccataaccatt 242
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>emb|BX824210.1|CNS0A5OW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZB07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1043

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 894 gaggatgaggttatcataaccataaccatt 865
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>emb|BX822827.1|CNS0A5UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZA08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 733

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 537 gaggatgaggttatcataaccataaccatt 508
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>emb|BX822539.1|CNS0A5TQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB47ZD10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 820

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 626 gaggatgaggttatcataaccataaccatt 597
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>gb|AF291712.1|AF291712 Arabidopsis thaliana initiation factor 3g mRNA, complete cds
          Length = 1085

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 213 gaggataaggttatcataaccatacccatt 242
           |||||| ||||||||||||||||| |||||
Sbjct: 894 gaggatgaggttatcataaccataaccatt 865
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>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete
             sequence
          Length = 117296

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 213   gaggataaggttatcataaccatacccatt 242
             |||||| ||||||||||||||||| |||||
Sbjct: 22868 gaggatgaggttatcataaccataaccatt 22839
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>gb|AY087887.1| Arabidopsis thaliana clone 39231 mRNA, complete sequence
          Length = 1190

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 213  gaggataaggttatcataaccatacccatt 242
            |||||| ||||||||||||||||| |||||
Sbjct: 1000 gaggatgaggttatcataaccataaccatt 971
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>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the
              TLR4 gene for toll-like receptor 4, the 5' end of a novel
              gene and a CpG island, complete sequence
          Length = 146978

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      aaaacttgatgaaatataaac 23
              |||||||||||||||||||||
Sbjct: 126040 aaaacttgatgaaatataaac 126060
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>gb|AC108518.3| Homo sapiens BAC clone RP11-699F8 from 4, complete sequence
          Length = 120612

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   ctgaatgcttagtaggcagta 178
             |||||||||||||||||||||
Sbjct: 34307 ctgaatgcttagtaggcagta 34327
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>gb|AC021216.6| Homo sapiens BAC clone RP11-497K18 from 4, complete sequence
          Length = 84902

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   ctgaatgcttagtaggcagta 178
             |||||||||||||||||||||
Sbjct: 14013 ctgaatgcttagtaggcagta 14033
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 111     aaaaagaactgataatgcggagagc 135
               |||||||||||||||||| ||||||
Sbjct: 1120440 aaaaagaactgataatgcagagagc 1120416
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>gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, complete sequence
          Length = 145992

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  ctgaatgcttagtaggcagta 178
            |||||||||||||||||||||
Sbjct: 4638 ctgaatgcttagtaggcagta 4658
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>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence
          Length = 203513

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 154   atatctgaatgcttagtaggcagtaact 181
             |||| |||||||||||||| ||||||||
Sbjct: 37653 atatttgaatgcttagtagccagtaact 37626
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>ref|XM_468181.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 870

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 214 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 273
           ||||| ||| |||| || ||||| |||||||||||   ||||||| |||| |||||||||
Sbjct: 836 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 777
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>gb|BT020011.1| Homo sapiens stress-induced-phosphoprotein 1
           (Hsp70/Hsp90-organizing protein) mRNA, complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 534 tctcagcgtcctccttgggg 553
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>gb|BT020010.1| Homo sapiens stress-induced-phosphoprotein 1
           (Hsp70/Hsp90-organizing protein) mRNA, complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 534 tctcagcgtcctccttgggg 553
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>ref|XM_369863.1| Magnaporthe grisea 70-15 hypothetical protein (MG06378.4) partial
           mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 258 cttctcagcgtcctccttggggac 281
           |||||| |||||||||||||||||
Sbjct: 486 cttctctgcgtcctccttggggac 463
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>gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complete sequence
          Length = 154959

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acaaaacttgatgaaatata 20
             ||||||||||||||||||||
Sbjct: 28359 acaaaacttgatgaaatata 28340
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>ref|XM_981023.1| PREDICTED: Mus musculus similar to Polyadenylate-binding protein 1
           (Poly(A)-binding protein 1) (PABP 1) (LOC381404), mRNA
          Length = 1788

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 caaagttgacaaaaccgaagcccc 304
           ||||||||||||| ||||||||||
Sbjct: 715 caaagttgacaaagccgaagcccc 692
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>ref|XM_909287.2| PREDICTED: Mus musculus similar to Polyadenylate-binding protein 1
           (Poly(A)-binding protein 1) (PABP 1) (LOC381404), mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 caaagttgacaaaaccgaagcccc 304
           ||||||||||||| ||||||||||
Sbjct: 715 caaagttgacaaagccgaagcccc 692
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>ref|XM_001005006.1| PREDICTED: Mus musculus similar to Polyadenylate-binding protein 1
           (Poly(A)-binding protein 1) (PABP 1) (LOC381404), mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 caaagttgacaaaaccgaagcccc 304
           ||||||||||||| ||||||||||
Sbjct: 715 caaagttgacaaagccgaagcccc 692
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>gb|BC039299.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
            protein), mRNA (cDNA clone MGC:39562 IMAGE:4830381),
            complete cds
          Length = 2763

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  tctcagcgtcctccttgggg 279
            ||||||||||||||||||||
Sbjct: 1228 tctcagcgtcctccttgggg 1247
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>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence
          Length = 165051

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 154   atatctgaatgcttagtaggcagtaact 181
             |||| |||||||||||||| ||||||||
Sbjct: 70742 atatttgaatgcttagtagccagtaact 70769
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>emb|AL137797.9| Human DNA sequence from clone RP5-1109J22 on chromosome 1 Contains
             three novel genes, the OTX3 gene for orthodenticle homolog
             3 (Drosophila) and a CpG island, complete sequence
          Length = 105345

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   acaaaaccgaagcccctgct 308
             ||||||||||||||||||||
Sbjct: 74715 acaaaaccgaagcccctgct 74696
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 241     ttgagcttgctgatggcctt 260
               ||||||||||||||||||||
Sbjct: 1188015 ttgagcttgctgatggcctt 1187996
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>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence
          Length = 202655

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 154    atatctgaatgcttagtaggcagtaact 181
              |||| |||||||||||||| ||||||||
Sbjct: 170374 atatttgaatgcttagtagccagtaact 170347
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    aagttgacaaaaccgaagcc 302
              ||||||||||||||||||||
Sbjct: 198380 aagttgacaaaaccgaagcc 198399
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>emb|CR536512.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0722D for
           gene STIP1, stress-induced-phosphoprotein 1
           (Hsp70/Hsp90-organizing protein); complete cds, incl.
           stopcodon
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 534 tctcagcgtcctccttgggg 553
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>gb|AY888342.1| Synthetic construct Homo sapiens clone FLH020107.01X
           stress-induced-phosphoprotein 1 (STIP1) mRNA, complete
           cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 534 tctcagcgtcctccttgggg 553
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>gb|AY888341.1| Synthetic construct Homo sapiens clone FLH020106.01X
           stress-induced-phosphoprotein 1 (STIP1) mRNA, complete
           cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 534 tctcagcgtcctccttgggg 553
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>gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complete sequence
          Length = 157763

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    atgaaatataaactcaagtc 30
             ||||||||||||||||||||
Sbjct: 61066 atgaaatataaactcaagtc 61047
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>gb|BC002987.1| Homo sapiens stress-induced-phosphoprotein 1
           (Hsp70/Hsp90-organizing protein), mRNA (cDNA clone
           MGC:3516 IMAGE:2823157), complete cds
          Length = 2137

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 596 tctcagcgtcctccttgggg 615
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>ref|NM_006819.1| Homo sapiens stress-induced-phosphoprotein 1
           (Hsp70/Hsp90-organizing protein) (STIP1), mRNA
          Length = 2113

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 596 tctcagcgtcctccttgggg 615
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>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ataaactcaagtccagtcct 37
              ||||||||||||||||||||
Sbjct: 109493 ataaactcaagtccagtcct 109474
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>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
              sequence
          Length = 118828

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    tctcagcgtcctccttgggg 279
              ||||||||||||||||||||
Sbjct: 116062 tctcagcgtcctccttgggg 116081
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>dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-412N3, complete
             sequence
          Length = 39955

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tctcagcgtcctccttgggg 279
             ||||||||||||||||||||
Sbjct: 11003 tctcagcgtcctccttgggg 11022
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>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
              sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    tctcagcgtcctccttgggg 279
              ||||||||||||||||||||
Sbjct: 116062 tctcagcgtcctccttgggg 116081
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>emb|AL591542.20| Mouse DNA sequence from clone RP23-321M14 on chromosome 2, complete
              sequence
          Length = 197190

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    caaagttgacaaaaccgaagcccc 304
              ||||||||||||| ||||||||||
Sbjct: 158274 caaagttgacaaagccgaagcccc 158251
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      atgaaatataaactcaagtc 30
               ||||||||||||||||||||
Sbjct: 1489630 atgaaatataaactcaagtc 1489611
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>gb|M86752.1|HUMIEF Human transformation-sensitive protein (IEF SSP 3521) mRNA,
           complete cds
          Length = 2113

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 tctcagcgtcctccttgggg 279
           ||||||||||||||||||||
Sbjct: 596 tctcagcgtcctccttgggg 615
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>emb|AJ415105.1|HSA415105 Homo sapiens partial IGVL7b gene for immunoglobulin lambda chain
           variable region, donor BJ, cell112
          Length = 249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 cctccttggggacaaagttg 288
           ||||||||||||||||||||
Sbjct: 147 cctccttggggacaaagttg 166
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>dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1466C5, APP-D21S292
             region, complete sequence
          Length = 151079

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ataaactcaagtccagtcct 37
             ||||||||||||||||||||
Sbjct: 10678 ataaactcaagtccagtcct 10659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,944,342
Number of Sequences: 3902068
Number of extensions: 2944342
Number of successful extensions: 59348
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59227
Number of HSP's gapped (non-prelim): 119
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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