ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast02f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192048.1| Oryza sativa (japonica cultivar-group), predic... 208 1e-50
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
3dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AK069379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
5dbj|AK060690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
6ref|XM_475892.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
7gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9gb|AY112191.1| Zea mays CL50078_1 mRNA sequence 62 2e-06
10dbj|AK058980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
11gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete... 44 0.38
12emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chr... 44 0.38
13gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, r... 44 0.38
14gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 44 0.38
15gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosom... 42 1.5
16emb|AL035259.1|SPCC1322 S.pombe chromosome III cosmid c1322 42 1.5
17ref|NM_001023123.1| Schizosaccharomyces pombe 972h- hypothetical... 42 1.5
18gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete... 40 5.9
19ref|NM_115769.1| Arabidopsis thaliana dopamine beta-monooxygenas... 40 5.9
20gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.9
21gb|AY810664.1| Schistosoma japonicum SJCHGC03674 protein mRNA, p... 40 5.9
22ref|XM_572290.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.9
23ref|XM_572291.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.9
24ref|XM_810735.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 5.9
25emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, B... 40 5.9
26emb|AL161511.2|ATCHRIV23 Arabidopsis thaliana DNA chromosome 4, ... 40 5.9
27emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, ... 40 5.9
28emb|AL080252.2|ATT12G13 Arabidopsis thaliana DNA chromosome 4, B... 40 5.9
29emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f2... 40 5.9
30gb|AC009758.8| Homo sapiens chromosome 11, clone RP11-101E4, com... 40 5.9
31gb|AC010930.9| Homo sapiens chromosome 11, clone RP11-54I6, comp... 40 5.9
32gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 5.9
33gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, c... 40 5.9
34gb|AC008271.6| Homo sapiens BAC clone RP11-123E16 from 2, comple... 40 5.9
35gb|AC009297.4| Homo sapiens BAC clone RP11-3E14 from 2, complete... 40 5.9
36gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 ... 40 5.9
37gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, co... 40 5.9 
>ref|NM_192048.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Minus

                                                                        
Query: 208  tgttgtttttccaccttgtccacacgaggacttcgagggtgatgatagtgatcagaagga 267
            |||||||||||||||||||||| |  ||||| || |||||||| || |||||||| ||||
Sbjct: 1093 tgttgtttttccaccttgtccatagcaggacctccagggtgataatggtgatcaggagga 1034

                                                                        
Query: 268  tggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgattc 327
            ||||||||||||| ||||||||||||||||||||||| || ||| |||| || |||||||
Sbjct: 1033 tggccaggttgaagccatagccgatcttccacgagttgccggcggctccgaccttgattc 974

                                                                        
Query: 328  ccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgatacc 387
            | |  |||||||| |  || |||||||||||  |||||||||||||||||||||| ||||
Sbjct: 973  caaggacaatgttgatggctgcaaagaagagcgcaagcctgcctacccaatggtggtacc 914

                                                             
Query: 388  agttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
            |||||||||||||||| || || ||||| ||||  |||| |||||||||
Sbjct: 913  agttccagtatttccgatattttgagtccttgtgaggccttaggaagaa 865
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Plus

                                                                            
Query: 208      tgttgtttttccaccttgtccacacgaggacttcgagggtgatgatagtgatcagaagga 267
                |||||||||||||||||||||| |  ||||| || |||||||| || |||||||| ||||
Sbjct: 28022343 tgttgtttttccaccttgtccatagcaggacctccagggtgataatggtgatcaggagga 28022402

                                                                            
Query: 268      tggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgattc 327
                ||||||||||||| ||||||||||||||||||||||| || ||| |||| || |||||||
Sbjct: 28022403 tggccaggttgaagccatagccgatcttccacgagttgccggcggctccgaccttgattc 28022462

                                                                            
Query: 328      ccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgatacc 387
                | |  |||||||| |  || |||||||||||  |||||||||||||||||||||| ||||
Sbjct: 28022463 caaggacaatgttgatggctgcaaagaagagcgcaagcctgcctacccaatggtggtacc 28022522

                                                                 
Query: 388      agttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
                |||||||||||||||| || || ||||| ||||  |||| |||||||||
Sbjct: 28022523 agttccagtatttccgatattttgagtccttgtgaggccttaggaagaa 28022571
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>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0019E03
          Length = 152092

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Plus

                                                                         
Query: 208   tgttgtttttccaccttgtccacacgaggacttcgagggtgatgatagtgatcagaagga 267
             |||||||||||||||||||||| |  ||||| || |||||||| || |||||||| ||||
Sbjct: 37542 tgttgtttttccaccttgtccatagcaggacctccagggtgataatggtgatcaggagga 37601

                                                                         
Query: 268   tggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgattc 327
             ||||||||||||| ||||||||||||||||||||||| || ||| |||| || |||||||
Sbjct: 37602 tggccaggttgaagccatagccgatcttccacgagttgccggcggctccgaccttgattc 37661

                                                                         
Query: 328   ccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgatacc 387
             | |  |||||||| |  || |||||||||||  |||||||||||||||||||||| ||||
Sbjct: 37662 caaggacaatgttgatggctgcaaagaagagcgcaagcctgcctacccaatggtggtacc 37721

                                                              
Query: 388   agttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
             |||||||||||||||| || || ||||| ||||  |||| |||||||||
Sbjct: 37722 agttccagtatttccgatattttgagtccttgtgaggccttaggaagaa 37770
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>dbj|AK069379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H09, full
            insert sequence
          Length = 1419

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Minus

                                                                        
Query: 208  tgttgtttttccaccttgtccacacgaggacttcgagggtgatgatagtgatcagaagga 267
            |||||||||||||||||||||| |  ||||| || |||||||| || |||||||| ||||
Sbjct: 1081 tgttgtttttccaccttgtccatagcaggacctccagggtgataatggtgatcaggagga 1022

                                                                        
Query: 268  tggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgattc 327
            ||||||||||||| ||||||||||||||||||||||| || ||| |||| || |||||||
Sbjct: 1021 tggccaggttgaagccatagccgatcttccacgagttgccggcggctccgaccttgattc 962

                                                                        
Query: 328  ccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgatacc 387
            | |  |||||||| |  || |||||||||||  |||||||||||||||||||||| ||||
Sbjct: 961  caaggacaatgttgatggctgcaaagaagagcgcaagcctgcctacccaatggtggtacc 902

                                                             
Query: 388  agttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
            |||||||||||||||| || || ||||| ||||  |||| |||||||||
Sbjct: 901  agttccagtatttccgatattttgagtccttgtgaggccttaggaagaa 853
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>dbj|AK060690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C01, full
            insert sequence
          Length = 1594

 Score =  208 bits (105), Expect = 1e-50
 Identities = 198/229 (86%)
 Strand = Plus / Minus

                                                                        
Query: 208  tgttgtttttccaccttgtccacacgaggacttcgagggtgatgatagtgatcagaagga 267
            |||||||||||||||||||||| |  ||||| || |||||||| || |||||||| ||||
Sbjct: 1302 tgttgtttttccaccttgtccatagcaggacctccagggtgataatggtgatcaggagga 1243

                                                                        
Query: 268  tggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgattc 327
            ||||||||||||| ||||||||||||||||||||||| || ||| |||| || |||||||
Sbjct: 1242 tggccaggttgaagccatagccgatcttccacgagttgccggcggctccgaccttgattc 1183

                                                                        
Query: 328  ccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgatacc 387
            | |  |||||||| |  || |||||||||||  |||||||||||||||||||||| ||||
Sbjct: 1182 caaggacaatgttgatggctgcaaagaagagcgcaagcctgcctacccaatggtggtacc 1123

                                                             
Query: 388  agttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
            |||||||||||||||| || || ||||| ||||  |||| |||||||||
Sbjct: 1122 agttccagtatttccgatattttgagtccttgtgaggccttaggaagaa 1074
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>ref|XM_475892.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 136/171 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  gatggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgat 325
            |||||| |||||||| || || |||||||||||||||||  |  |||| || || | |||
Sbjct: 1029 gatggcgaggttgaagccgtacccgatcttccacgagttgtccccgccgccgacgtggat 970

                                                                        
Query: 326  tcccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgata 385
             || | ||| ||||| || || || ||||| || || ||||||||   ||| ||||| ||
Sbjct: 969  accgagcacgatgttgacggcggcgaagaacagcaccagcctgcccgaccagtggtggta 910

                                                               
Query: 386  ccagttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
            ||||||||| || ||||||||||| |||||  |||| ||||| ||||||||
Sbjct: 909  ccagttccaatacttccggtacttggagtccgtgttcggccgcaggaagaa 859
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>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
             complete sequence
          Length = 144601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 136/171 (79%)
 Strand = Plus / Minus

                                                                         
Query: 266   gatggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgat 325
             |||||| |||||||| || || |||||||||||||||||  |  |||| || || | |||
Sbjct: 44859 gatggcgaggttgaagccgtacccgatcttccacgagttgtccccgccgccgacgtggat 44800

                                                                         
Query: 326   tcccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgata 385
              || | ||| ||||| || || || ||||| || || ||||||||   ||| ||||| ||
Sbjct: 44799 accgagcacgatgttgacggcggcgaagaacagcaccagcctgcccgaccagtggtggta 44740

                                                                
Query: 386   ccagttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
             ||||||||| || ||||||||||| |||||  |||| ||||| ||||||||
Sbjct: 44739 ccagttccaatacttccggtacttggagtccgtgttcggccgcaggaagaa 44689
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 136/171 (79%)
 Strand = Plus / Minus

                                                                            
Query: 266      gatggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgat 325
                |||||| |||||||| || || |||||||||||||||||  |  |||| || || | |||
Sbjct: 27448729 gatggcgaggttgaagccgtacccgatcttccacgagttgtccccgccgccgacgtggat 27448670

                                                                            
Query: 326      tcccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgata 385
                 || | ||| ||||| || || || ||||| || || ||||||||   ||| ||||| ||
Sbjct: 27448669 accgagcacgatgttgacggcggcgaagaacagcaccagcctgcccgaccagtggtggta 27448610

                                                                   
Query: 386      ccagttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
                ||||||||| || ||||||||||| |||||  |||| ||||| ||||||||
Sbjct: 27448609 ccagttccaatacttccggtacttggagtccgtgttcggccgcaggaagaa 27448559
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>gb|AY112191.1| Zea mays CL50078_1 mRNA sequence
          Length = 649

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 348 gcaaagaagagaacaagcctgcctacccaatggtgataccagttccagtatttccggtac 407
           |||||||||||  | |||||||| ||||| ||||| |||||||||||| | || || |||
Sbjct: 444 gcaaagaagagggcgagcctgccgacccagtggtggtaccagttccagaacttgcgatac 503

                              
Query: 408 ttcgagtctttgttgggcc 426
           || ||||| ||||||||||
Sbjct: 504 ttggagtccttgttgggcc 522
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>dbj|AK058980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D11, full
            insert sequence
          Length = 1462

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 136/171 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  gatggccaggttgaaaccatagccgatcttccacgagttaccagcgcctccaactttgat 325
            |||||| |||||||| || || |||||||||||||||||  |  |||| || || | |||
Sbjct: 1168 gatggcgaggttgaagccgtacccgatcttccacgagttgtccccgccgccgacgtggat 1109

                                                                        
Query: 326  tcccaccacaatgttaactgccgcaaagaagagaacaagcctgcctacccaatggtgata 385
             || | ||| ||||| || || || ||||| || || ||||||||   ||| ||||| ||
Sbjct: 1108 accgagcacgatgttgacggcggcgaagaacagcaccagcctgcccgaccagtggtggta 1049

                                                               
Query: 386  ccagttccagtatttccggtacttcgagtctttgttgggccgtaggaagaa 436
            ||||||||| || ||||||||||| |||||  |||| ||||| ||||||||
Sbjct: 1048 ccagttccaatacttccggtacttggagtccgtgttcggccgcaggaagaa 998
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>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence
          Length = 173097

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     tgcaacagcacaagaagaagaa 120
              ||||||||||||||||||||||
Sbjct: 172568 tgcaacagcacaagaagaagaa 172547
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>emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chromosome 13 Contains ESTs,
              STSs and GSSs, complete sequence
          Length = 176446

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 108    acaagaagaagaaaacgaatgaaaat 133
              |||||||||| |||||||||||||||
Sbjct: 127386 acaagaagaacaaaacgaatgaaaat 127411
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>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
              BACR03J18, complete sequence
          Length = 161614

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     tgcaacagcacaagaagaagaa 120
              ||||||||||||||||||||||
Sbjct: 135762 tgcaacagcacaagaagaagaa 135783
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     tgcaacagcacaagaagaagaa 120
              ||||||||||||||||||||||
Sbjct: 240127 tgcaacagcacaagaagaagaa 240148
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>gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosome 13, complete sequence
          Length = 176871

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    tcagtggttcacaaaacaaga 164
              |||||||||||||||||||||
Sbjct: 110003 tcagtggttcacaaaacaaga 109983
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>emb|AL035259.1|SPCC1322 S.pombe chromosome III cosmid c1322
          Length = 42070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 51   cttgcagatccttgctacaag 71
            |||||||||||||||||||||
Sbjct: 9449 cttgcagatccttgctacaag 9429
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>ref|NM_001023123.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC1322.05c),
            partial mRNA
          Length = 1839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 51   cttgcagatccttgctacaag 71
            |||||||||||||||||||||
Sbjct: 1393 cttgcagatccttgctacaag 1413
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>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence
          Length = 179396

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   cacaagaagaagaaaacgaa 126
             ||||||||||||||||||||
Sbjct: 69451 cacaagaagaagaaaacgaa 69470
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>ref|NM_115769.1| Arabidopsis thaliana dopamine beta-monooxygenase AT3G59070 mRNA,
           complete cds
          Length = 1401

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 tgataccagttccagtattt 400
           ||||||||||||||||||||
Sbjct: 974 tgataccagttccagtattt 955
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    acaagaagaagaaaacgaat 127
              ||||||||||||||||||||
Sbjct: 912832 acaagaagaagaaaacgaat 912851
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>gb|AY810664.1| Schistosoma japonicum SJCHGC03674 protein mRNA, partial cds
          Length = 719

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 aagaagaagaaaacgaatga 129
           ||||||||||||||||||||
Sbjct: 110 aagaagaagaaaacgaatga 129
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>ref|XM_572290.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH00960) partial mRNA
          Length = 1337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  acaagaagaagaaaacgaat 127
            ||||||||||||||||||||
Sbjct: 1259 acaagaagaagaaaacgaat 1240
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>ref|XM_572291.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH00960) partial mRNA
          Length = 1506

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  acaagaagaagaaaacgaat 127
            ||||||||||||||||||||
Sbjct: 1428 acaagaagaagaaaacgaat 1409
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>ref|XM_810735.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053511077.60) partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 aagaagaaaacgaatgaaaa 132
           ||||||||||||||||||||
Sbjct: 292 aagaagaaaacgaatgaaaa 311
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>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16
          Length = 89517

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   tgataccagttccagtattt 400
             ||||||||||||||||||||
Sbjct: 46772 tgataccagttccagtattt 46791
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>emb|AL161511.2|ATCHRIV23 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 23
          Length = 197306

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 aagaagaaaacgaatgaaaa 132
           ||||||||||||||||||||
Sbjct: 819 aagaagaaaacgaatgaaaa 838
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>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22
          Length = 198131

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    aagaagaaaacgaatgaaaa 132
              ||||||||||||||||||||
Sbjct: 193950 aagaagaaaacgaatgaaaa 193969
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>emb|AL080252.2|ATT12G13 Arabidopsis thaliana DNA chromosome 4, BAC clone T12G13, partial
             sequence (ESSA project)
          Length = 91226

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   aagaagaaaacgaatgaaaa 132
             ||||||||||||||||||||
Sbjct: 65047 aagaagaaaacgaatgaaaa 65066
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>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE
          Length = 149149

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    ctagtcttgcagatccttgc 65
             ||||||||||||||||||||
Sbjct: 81929 ctagtcttgcagatccttgc 81948
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>gb|AC009758.8| Homo sapiens chromosome 11, clone RP11-101E4, complete sequence
          Length = 141485

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   attcccaccacaatgttaac 343
             ||||||||||||||||||||
Sbjct: 37750 attcccaccacaatgttaac 37769
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>gb|AC010930.9| Homo sapiens chromosome 11, clone RP11-54I6, complete sequence
          Length = 148313

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   attcccaccacaatgttaac 343
             ||||||||||||||||||||
Sbjct: 27613 attcccaccacaatgttaac 27594
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 109     caagaagaagaaaacgaatgaaaattat 136
               |||||||||||||| ||| |||||||||
Sbjct: 3375538 caagaagaagaaaaagaaagaaaattat 3375565
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>gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, complete sequence
          Length = 35833

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   caagaagaagaaaacgaatgaaaa 132
             ||||||||||||||| ||||||||
Sbjct: 12471 caagaagaagaaaacaaatgaaaa 12448
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>gb|AC008271.6| Homo sapiens BAC clone RP11-123E16 from 2, complete sequence
          Length = 111159

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gtttttccaccttgtccaca 231
             ||||||||||||||||||||
Sbjct: 42343 gtttttccaccttgtccaca 42362
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>gb|AC009297.4| Homo sapiens BAC clone RP11-3E14 from 2, complete sequence
          Length = 91745

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   aagaagaagaaaacgaatgaaaattata 137
             ||||| |||||| |||||||||||||||
Sbjct: 40503 aagaaaaagaaatcgaatgaaaattata 40530
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>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete
              sequence
          Length = 304712

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    cacaagaagaagaaaacgaa 126
              ||||||||||||||||||||
Sbjct: 220384 cacaagaagaagaaaacgaa 220403
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>gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, complete sequence
          Length = 167184

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ttcagtggttcacaaaacaa 162
              ||||||||||||||||||||
Sbjct: 135491 ttcagtggttcacaaaacaa 135472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,897,440
Number of Sequences: 3902068
Number of extensions: 4897440
Number of successful extensions: 82447
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82309
Number of HSP's gapped (non-prelim): 138
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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