ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast02f03 |
|---|---|
| Clone Library Name | barley_pub |
>DCE2_HUMAN (Q05329) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate| decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase) Length = 585 Score = 32.0 bits (71), Expect = 0.42 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K+ GMA L + +AF+ +H+ HF +++ A G GT Sbjct: 259 FPEVKEKGMAALPRLIAFTSEHS---HFSLKKGAAALGIGT 296
>DCE2_RAT (Q05683) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate| decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase) Length = 585 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K+ GMA + + +AF+ +H+ HF +++ A G GT Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296
>DCE2_PIG (P48321) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate| decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase) Length = 585 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K+ GMA + + +AF+ +H+ HF +++ A G GT Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296
>DCE2_MOUSE (P48320) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate| decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase) Length = 585 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K+ GMA + + +AF+ +H+ HF +++ A G GT Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296
>DCE2_CANFA (Q4PRC2) Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate| decarboxylase, 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase) Length = 585 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K+ GMA + + +AF+ +H+ HF +++ A G GT Sbjct: 259 FPEVKEKGMAAVPRLIAFTSEHS---HFSLKKGAAALGIGT 296
>DCE1_PIG (P48319) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate| decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase) Length = 594 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K GMA + K + F+ +H+ H+ I+++ GFGT Sbjct: 268 FPEVKTKGMAAVPKLVLFTSEHS---HYSIKKAGAALGFGT 305
>DCE1_FELCA (P14748) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate| decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase) Length = 594 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K GMA + K + F+ +H+ H+ I+++ GFGT Sbjct: 268 FPEVKTKGMAAVPKLVLFTSEHS---HYSIKKAGAALGFGT 305
>DCE1_RAT (P18088) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate| decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase) Length = 593 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K GMA + K + F+ +H+ H+ I+++ GFGT Sbjct: 267 FPEVKTKGMAAVPKLVLFTSEHS---HYSIKKAGAALGFGT 304
>DCE1_MOUSE (P48318) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate| decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase) Length = 593 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K GMA + K + F+ +H+ H+ I+++ GFGT Sbjct: 267 FPEVKTKGMAAVPKLVLFTSEHS---HYSIKKAGAALGFGT 304
>DCE1_PONPY (Q5R7S7) Glutamate decarboxylase 1 (EC 4.1.1.15)| Length = 594 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 256 FQHSKKSGMAGLAKQMAFSFDHTHS*HFPIERSAVYFGFGT 134 F K GMA + K + F+ +H+ H+ I+++ GFGT Sbjct: 268 FLEVKTKGMAAVPKLVLFTSEHS---HYSIKKAGAALGFGT 305
>LUXB2_PHOLU (P23147) Alkanal monooxygenase beta chain (EC 1.14.14.3) (Bacterial| luciferase beta chain) Length = 324 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +1 Query: 130 QWCQSRSIPRIFQWEN---VKSEYGQR 201 +W + IP IF+W++ VK EY +R Sbjct: 181 EWAAKKGIPLIFKWDDSNEVKHEYAKR 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,654,726 Number of Sequences: 219361 Number of extensions: 582460 Number of successful extensions: 1214 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1214 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
