>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence
          Length = 92738

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    attattaagggaagcaataaca 44
             ||||||||||||||||||||||
Sbjct: 31125 attattaagggaagcaataaca 31104

>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 23     attattaagggaagcaataaca 44
              ||||||||||||||||||||||
Sbjct: 108220 attattaagggaagcaataaca 108199

>emb|CR450695.14| Zebrafish DNA sequence from clone DKEYP-72F10 in linkage group 24,
              complete sequence
          Length = 187631

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 171    ggaaaatgtcaagagtgagta 191
              |||||||||||||||||||||
Sbjct: 117656 ggaaaatgtcaagagtgagta 117636

>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    tctcaggctttcgcattagcactc 75
             |||||||||||| |||||||||||
Sbjct: 22520 tctcaggctttcccattagcactc 22497

>gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosome 9, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    tctcaggctttcgcattagcactc 75
             |||||||||||| |||||||||||
Sbjct: 73038 tctcaggctttcccattagcactc 73061

>emb|AL032645.1|CEY67A6A Caenorhabditis elegans YAC Y67A6A, complete sequence
          Length = 27185

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   gatctttcaatgggaaaatg 178
             ||||||||||||||||||||
Sbjct: 12114 gatctttcaatgggaaaatg 12133

>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5, complete
              sequence
          Length = 155089

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     gccaaatgcatttattatta 29
              ||||||||||||||||||||
Sbjct: 131517 gccaaatgcatttattatta 131498

>emb|AL358933.15| Human DNA sequence from clone RP1-265C24 on chromosome 6 Contains the
             ZNF192 gene for zinc finger protein 192 (LD5-1), the gene
             for a novel SCAN box protein, the 5' end of a novel gene,
             ESTs, STSs, GSSs and two CpG islands, complete sequence
          Length = 55480

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   caatgggaaaatgtcaagag 185
             ||||||||||||||||||||
Sbjct: 39794 caatgggaaaatgtcaagag 39775

>emb|BX088597.18| Zebrafish DNA sequence from clone DKEY-171P23 in linkage group 5,
              complete sequence
          Length = 172098

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     gccaaatgcatttattatta 29
              ||||||||||||||||||||
Sbjct: 161916 gccaaatgcatttattatta 161897

>gb|AC120570.5| Rattus norvegicus 1 BAC CH230-96N8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227607

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     caaatgcatttattattaag 31
              ||||||||||||||||||||
Sbjct: 130692 caaatgcatttattattaag 130711

>gb|AC024559.15| Homo sapiens 3 BAC RP11-407B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165016

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 224   tccagccatgccgctctttttgct 247
             ||||||||||| ||||||||||||
Sbjct: 34065 tccagccatgctgctctttttgct 34088

>gb|AC107613.15| Homo sapiens X BAC RP11-501H19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132501

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     aagtcgccaaatgcatttattatt 28
             |||| |||||||||||||||||||
Sbjct: 23311 aagttgccaaatgcatttattatt 23334

>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5,
           complete sequence
          Length = 168064

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  gccaaatgcatttattatta 29
           ||||||||||||||||||||
Sbjct: 930 gccaaatgcatttattatta 949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,505,859
Number of Sequences: 3902068
Number of extensions: 2505859
Number of successful extensions: 78561
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78544
Number of HSP's gapped (non-prelim): 17
length of query: 272
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 250
effective length of database: 17,147,199,772
effective search space: 4286799943000
effective search space used: 4286799943000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)