ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast02d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477212.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.096
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
3dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
4dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
6dbj|AK102466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
7dbj|AK099547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
8dbj|AK099240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
9dbj|AK059925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.38
11emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.38
12gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, com... 42 1.5
13emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chr... 42 1.5
14gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, comple... 42 1.5
15gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complet... 42 1.5
16gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, comple... 42 1.5
17gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park C... 42 1.5
18emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14,... 42 1.5
19gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 42 1.5
20gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, com... 40 5.9
21gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, comp... 40 5.9
22gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete seq... 40 5.9
23gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete se... 40 5.9
24gb|AC119986.7| Mus musculus chromosome 14, clone RP24-502B4, com... 40 5.9
25gb|AC161440.8| Mus musculus chromosome 7, clone RP23-309B10, com... 40 5.9
26gb|AC110092.4| Mus musculus BAC clone RP24-94E17 from chromosome... 40 5.9
27gb|AY814491.1| Schistosoma japonicum SJCHGC05076 protein mRNA, c... 40 5.9
28gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, c... 40 5.9
29gb|AY222944.1| Schistosoma japonicum clone ZZD448 mRNA sequence 40 5.9
30gb|AC115804.7| Mus musculus chromosome 14, clone RP23-411N8, com... 40 5.9
31gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, com... 40 5.9
32gb|CP000001.1| Bacillus cereus E33L, complete genome 40 5.9
33emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on ch... 40 5.9
34gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, co... 40 5.9
35gb|AE014176.1| Mus musculus piebald deletion region section 4 of... 40 5.9
36gb|AC096757.3| Homo sapiens BAC clone RP11-543H9 from 4, complet... 40 5.9
37gb|AC097510.3| Homo sapiens BAC clone RP11-390C19 from 4, comple... 40 5.9
38gb|AC159148.10| Mus musculus 10 BAC RP23-42M24 (Roswell Park Can... 40 5.9
39dbj|AK082722.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 5.9
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
41gb|AC079161.5| Homo sapiens BAC clone RP11-416B10 from 2, comple... 40 5.9
42dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
43dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44gb|BC088587.1| Xenopus tropicalis hypothetical LOC496865, mRNA (... 40 5.9
45gb|DQ304649.1| Homo sapiens anaphase promoting complex subunit 1... 40 5.9
46gb|U34769.1|MMINTEGR16 Mus musculus alpha-4 integrin gene, exon 23 40 5.9
47gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome... 40 5.9 
>ref|XM_477212.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 663

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 374 gtccttgtcatttccacaaacaaacttacgg 404
           ||||||||| ||||| |||||||||||||||
Sbjct: 603 gtccttgtcgtttccgcaaacaaacttacgg 573
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 374     gtccttgtcatttccacaaacaaacttacgg 404
               ||||||||| ||||| |||||||||||||||
Sbjct: 7761443 gtccttgtcgtttccgcaaacaaacttacgg 7761473
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>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0523A04
          Length = 149049

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 374   gtccttgtcatttccacaaacaaacttacgg 404
             ||||||||| ||||| |||||||||||||||
Sbjct: 10441 gtccttgtcgtttccgcaaacaaacttacgg 10471
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>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0565A07
          Length = 152191

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 374    gtccttgtcatttccacaaacaaacttacgg 404
              ||||||||| ||||| |||||||||||||||
Sbjct: 105532 gtccttgtcgtttccgcaaacaaacttacgg 105562
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 374    gtccttgtcatttccacaaacaaacttacg 403
              ||||||||| |||||||||||||| |||||
Sbjct: 374085 gtccttgtcgtttccacaaacaaatttacg 374114
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>dbj|AK102466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094E18, full
           insert sequence
          Length = 1375

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 374 gtccttgtcatttccacaaacaaacttacg 403
           ||||||||| |||||||||||||| |||||
Sbjct: 954 gtccttgtcgtttccacaaacaaatttacg 925
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>dbj|AK099547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033C16, full
           insert sequence
          Length = 1020

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 374 gtccttgtcatttccacaaacaaacttacg 403
           ||||||||| |||||||||||||| |||||
Sbjct: 601 gtccttgtcgtttccacaaacaaatttacg 572
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>dbj|AK099240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115L04, full
           insert sequence
          Length = 1365

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 374 gtccttgtcatttccacaaacaaacttacg 403
           ||||||||| |||||||||||||| |||||
Sbjct: 946 gtccttgtcgtttccacaaacaaatttacg 917
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>dbj|AK059925.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-H11, full
           insert sequence
          Length = 1368

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 374 gtccttgtcatttccacaaacaaacttacg 403
           ||||||||| |||||||||||||| |||||
Sbjct: 945 gtccttgtcgtttccacaaacaaatttacg 916
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 374    gtccttgtcatttccacaaacaaacttacg 403
              ||||||||| |||||||||||||| |||||
Sbjct: 374085 gtccttgtcgtttccacaaacaaatttacg 374114
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 374    gtccttgtcatttccacaaacaaacttacg 403
              ||||||||| |||||||||||||| |||||
Sbjct: 107136 gtccttgtcgtttccacaaacaaatttacg 107165
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>gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, complete sequence
          Length = 223925

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     gctgatgcaaacacacacaaa 92
              |||||||||||||||||||||
Sbjct: 214251 gctgatgcaaacacacacaaa 214271
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>emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chromosome 1q31.1 Contains
              STSs, GSSs and a CpG island, complete sequence
          Length = 147784

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     tgatgcaaacacacacaaata 94
              |||||||||||||||||||||
Sbjct: 119618 tgatgcaaacacacacaaata 119598
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>gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, complete sequence
          Length = 39855

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 376  ccttgtcatttccacaaacaaactt 400
            |||| ||||||||||||||||||||
Sbjct: 4890 ccttctcatttccacaaacaaactt 4914
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>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence
          Length = 220568

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    ttgctgatgcaaacacacacaaata 94
             ||||| |||||||||||||||||||
Sbjct: 68777 ttgcttatgcaaacacacacaaata 68801
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>gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, complete sequence
          Length = 196020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   tgcaaaatgtcccggttgcca 437
             |||||||||||||||||||||
Sbjct: 79891 tgcaaaatgtcccggttgcca 79911
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>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188527

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 378   ttgtcatttccacaaacaaac 398
             |||||||||||||||||||||
Sbjct: 79696 ttgtcatttccacaaacaaac 79676
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>emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14, complete sequence
          Length = 155287

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 68    cattgctgatgcaaacacacacaaa 92
             ||||||||||||| |||||||||||
Sbjct: 35137 cattgctgatgcacacacacacaaa 35161
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>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 72   gctgatgcaaacacacacaaa 92
            |||||||||||||||||||||
Sbjct: 2662 gctgatgcaaacacacacaaa 2682
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>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence
          Length = 172282

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    atgcaaacacacacaaataa 95
             ||||||||||||||||||||
Sbjct: 72757 atgcaaacacacacaaataa 72738
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>gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, complete sequence
          Length = 211735

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     aaacacacacaaataaccaa 99
              ||||||||||||||||||||
Sbjct: 123902 aaacacacacaaataaccaa 123921
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>gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete sequence
          Length = 191184

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tgctaaatgtcacctgacct 63
              ||||||||||||||||||||
Sbjct: 164101 tgctaaatgtcacctgacct 164082
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>gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete sequence
          Length = 186914

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tgctaaatgtcacctgacct 63
              ||||||||||||||||||||
Sbjct: 161791 tgctaaatgtcacctgacct 161772
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>gb|AC119986.7| Mus musculus chromosome 14, clone RP24-502B4, complete sequence
          Length = 170418

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    caaacacacacaaataaccaacaa 102
             |||||||||||||||||| |||||
Sbjct: 10064 caaacacacacaaataacaaacaa 10041
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>gb|AC161440.8| Mus musculus chromosome 7, clone RP23-309B10, complete sequence
          Length = 181423

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     aaacacacacaaataaccaa 99
              ||||||||||||||||||||
Sbjct: 104943 aaacacacacaaataaccaa 104924
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>gb|AC110092.4| Mus musculus BAC clone RP24-94E17 from chromosome 14, complete sequence
          Length = 184368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tgctaatgtggcctgaatcg 200
             ||||||||||||||||||||
Sbjct: 38395 tgctaatgtggcctgaatcg 38376
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>gb|AY814491.1| Schistosoma japonicum SJCHGC05076 protein mRNA, complete cds
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 atttccacaaacaaacttac 402
           ||||||||||||||||||||
Sbjct: 283 atttccacaaacaaacttac 264
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>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence
          Length = 212687

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     atgcaaacacacacaaataa 95
              ||||||||||||||||||||
Sbjct: 137832 atgcaaacacacacaaataa 137813
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>gb|AY222944.1| Schistosoma japonicum clone ZZD448 mRNA sequence
          Length = 790

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 atttccacaaacaaacttac 402
           ||||||||||||||||||||
Sbjct: 187 atttccacaaacaaacttac 168
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>gb|AC115804.7| Mus musculus chromosome 14, clone RP23-411N8, complete sequence
          Length = 220114

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    caaacacacacaaataaccaacaa 102
             |||||||||||||||||| |||||
Sbjct: 13685 caaacacacacaaataacaaacaa 13708
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>gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, complete sequence
          Length = 195727

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     atgcaaacacacacaaataa 95
              ||||||||||||||||||||
Sbjct: 121594 atgcaaacacacacaaataa 121613
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      tgatccattgctgatgcaaa 82
               ||||||||||||||||||||
Sbjct: 3570654 tgatccattgctgatgcaaa 3570635
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>emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on chromosome 1 Contains the 3'
              end of the TTF2 gene for RNA polymerase II transcription
              termination factor, the TRIM45 gene for tripartite
              motif-containing 45, a ribosomal protein S15a (RPS15A)
              pseudogene, the gene for immune costimulatory protein B7-H4
              and a CpG island, complete sequence
          Length = 171595

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     tgcaaacacacacaaataac 96
              ||||||||||||||||||||
Sbjct: 132417 tgcaaacacacacaaataac 132436
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>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence
          Length = 161765

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    tgtcacctgacctgatccat 70
             ||||||||||||||||||||
Sbjct: 78621 tgtcacctgacctgatccat 78602
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>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete
              sequence
          Length = 395229

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tgctaatgtggcctgaatcg 200
              ||||||||||||||||||||
Sbjct: 370004 tgctaatgtggcctgaatcg 370023
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>gb|AC096757.3| Homo sapiens BAC clone RP11-543H9 from 4, complete sequence
          Length = 188464

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tacgaatatttattccatat 177
             ||||||||||||||||||||
Sbjct: 50096 tacgaatatttattccatat 50115
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>gb|AC097510.3| Homo sapiens BAC clone RP11-390C19 from 4, complete sequence
          Length = 177467

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     acacacacaaataaccaacaagct 105
              |||||||||||||||||| |||||
Sbjct: 132941 acacacacaaataaccaaaaagct 132964
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>gb|AC159148.10| Mus musculus 10 BAC RP23-42M24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 166208

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    tcttcctcttgaatggtggg 292
              ||||||||||||||||||||
Sbjct: 128663 tcttcctcttgaatggtggg 128644
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>dbj|AK082722.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230096N06
            product:unclassifiable, full insert sequence
          Length = 2583

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   atgcaaacacacacaaataa 95
            ||||||||||||||||||||
Sbjct: 1772 atgcaaacacacacaaataa 1753
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     ttgattcttcctcttgaatg 287
               ||||||||||||||||||||
Sbjct: 9981914 ttgattcttcctcttgaatg 9981895
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>gb|AC079161.5| Homo sapiens BAC clone RP11-416B10 from 2, complete sequence
          Length = 161134

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    attccacgaaattcagagaa 343
              ||||||||||||||||||||
Sbjct: 131552 attccacgaaattcagagaa 131533
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>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1127C04
          Length = 121441

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ttgattcttcctcttgaatg 287
             ||||||||||||||||||||
Sbjct: 21816 ttgattcttcctcttgaatg 21797
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>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0005C03
          Length = 166423

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    ttgattcttcctcttgaatg 287
              ||||||||||||||||||||
Sbjct: 129161 ttgattcttcctcttgaatg 129142
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>gb|BC088587.1| Xenopus tropicalis hypothetical LOC496865, mRNA (cDNA clone
           IMAGE:6991296), partial cds
          Length = 3593

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 cctgtccttgtcatttccac 390
           ||||||||||||||||||||
Sbjct: 956 cctgtccttgtcatttccac 937
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>gb|DQ304649.1| Homo sapiens anaphase promoting complex subunit 10 (ANAPC10) gene,
             complete cds
          Length = 106979

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   tacgaatatttattccatat 177
             ||||||||||||||||||||
Sbjct: 16996 tacgaatatttattccatat 16977
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>gb|U34769.1|MMINTEGR16 Mus musculus alpha-4 integrin gene, exon 23
          Length = 836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  aaacacacacaaataaccaa 99
           ||||||||||||||||||||
Sbjct: 280 aaacacacacaaataaccaa 299
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>gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome 13, complete sequence
          Length = 173581

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    caaacacacacaaataacca 98
             ||||||||||||||||||||
Sbjct: 55794 caaacacacacaaataacca 55813


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,507,206
Number of Sequences: 3902068
Number of extensions: 4507206
Number of successful extensions: 92732
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92457
Number of HSP's gapped (non-prelim): 275
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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