ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast02c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108343.1| Zea mays PCO065510 mRNA sequence 147 3e-32
2ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predic... 123 5e-25
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 5e-25
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
5dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
6dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
7dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
8dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
9dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
10gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 123 5e-25
11emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 6e-09
12emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4,... 70 6e-09
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
14ref|NM_189710.1| Oryza sativa (japonica cultivar-group), predic... 66 1e-07
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
16dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
17gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 54 4e-04
18gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 ... 54 4e-04
19gb|AY105739.1| Zea mays PCO084555 mRNA sequence 54 4e-04
20ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative... 52 0.001
21gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
23dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
24gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 52 0.001
25dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
26dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
28gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
29ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative... 50 0.006
30ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothet... 50 0.006
31gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
32gb|AC116926.1| Genomic sequence for Oryza sativa (japonica culti... 50 0.006
33gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, c... 50 0.006
34ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
35gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.023
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
37dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
38gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.091
39gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.091
40dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
41dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
42dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
43dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
44ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
45gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
46gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
48dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
49dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
50dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
51emb|AL109756.9|HSDJ617C6 Human DNA sequence from clone RP4-617C6... 42 1.4
52emb|AL079334.7|HSJ300O13 Human DNA sequence from clone RP1-300O1... 42 1.4
53dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
54emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 42 1.4
55emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 i... 42 1.4
56ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
57ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
58emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid l... 40 5.6
59emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chro... 40 5.6
60ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.6
61gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
62gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosom... 40 5.6
63dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
64gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, com... 40 5.6
65gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-28... 40 5.6
66gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
67gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
68dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
69dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
70dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
71dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
72dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
73dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
74dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
75gb|AY110123.1| Zea mays CL29782_1 mRNA sequence 40 5.6
76gb|AY109713.2| Zea mays CL1191_1 mRNA sequence 40 5.6
77gb|AY108989.1| Zea mays PCO108745 mRNA sequence 40 5.6
78emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 5.6
79emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 5.6
80dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
81emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chr... 40 5.6 
>gb|AY108343.1| Zea mays PCO065510 mRNA sequence
          Length = 1496

 Score =  147 bits (74), Expect = 3e-32
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 312 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggc 371
           ||||||||||||||||||||||||||||||||||||||||||||||||| |  |  ||||
Sbjct: 369 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctgcgcgcggggc 428

                                                         
Query: 372 ggcgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaa 417
           |||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct: 429 ggcgcacgcggcggacggcgcgccacaccgcgctgttgcacttgaa 474
to top
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1788

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
            |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 1784 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1725

                                                          
Query: 374  cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1724 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 1679
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                           
Query: 314     gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
               |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 4253220 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253161

                                                             
Query: 374     cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
               |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 4253160 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 4253115



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 389     gcgcgccacacggcgctgttgcacttgaacc 419
               |||||||| || |||||||||||||||||||
Sbjct: 7656819 gcgcgccagaccgcgctgttgcacttgaacc 7656849



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 398     acggcgctgttgcacttgaa 417
               ||||||||||||||||||||
Sbjct: 6271478 acggcgctgttgcacttgaa 6271497



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     acggcgctgttgcacttgaa 417
               ||||||||||||||||||||
Sbjct: 3388428 acggcgctgttgcacttgaa 3388409
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                           
Query: 314     gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
               |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 4253335 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253276

                                                             
Query: 374     cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
               |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 4253275 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 4253230



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 389     gcgcgccacacggcgctgttgcacttgaacc 419
               |||||||| || |||||||||||||||||||
Sbjct: 7654654 gcgcgccagaccgcgctgttgcacttgaacc 7654684



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 398     acggcgctgttgcacttgaa 417
               ||||||||||||||||||||
Sbjct: 6270691 acggcgctgttgcacttgaa 6270710



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     acggcgctgttgcacttgaa 417
               ||||||||||||||||||||
Sbjct: 3388539 acggcgctgttgcacttgaa 3388520
to top
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full
            insert sequence
          Length = 1912

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
            |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620

                                                          
Query: 374  cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 1574
to top
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full
           insert sequence
          Length = 662

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
           |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 429 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 370

                                                         
Query: 374 cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
           |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 369 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 324
to top
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full
            insert sequence
          Length = 1903

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
            |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 1670 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1611

                                                          
Query: 374  cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1610 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 1565
to top
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full
            insert sequence
          Length = 1909

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
            |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620

                                                          
Query: 374  cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 1574
to top
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full
            insert sequence
          Length = 1907

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 314  gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
            |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 1674 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1615

                                                          
Query: 374  cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1614 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 1569
to top
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                         
Query: 314   gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 373
             |||| |||||| ||||||||||| |||| |||||||||||| ||||| |  | |||||||
Sbjct: 81835 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 81776

                                                           
Query: 374   cgcacgcgtccgacggcgcgccacacggcgctgttgcacttgaacc 419
             |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 81775 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacc 81730
to top
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
              complete sequence
          Length = 141787

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                 
Query: 385    gacggcgcgccacacggcgctgttgcacttgaacc 419
              |||||||||||||||||||||||||||||||||||
Sbjct: 124976 gacggcgcgccacacggcgctgttgcacttgaacc 125010
to top
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10,
             complete sequence
          Length = 133967

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                
Query: 385   gacggcgcgccacacggcgctgttgcacttgaacc 419
             |||||||||||||||||||||||||||||||||||
Sbjct: 41534 gacggcgcgccacacggcgctgttgcacttgaacc 41568
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                   
Query: 385      gacggcgcgccacacggcgctgttgcacttgaacc 419
                |||||||||||||||||||||||||||||||||||
Sbjct: 27390380 gacggcgcgccacacggcgctgttgcacttgaacc 27390414
to top
>ref|NM_189710.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 387 cggcgcgccacacggcgctgttgcacttgaacc 419
           |||||||||||||||||||||||||||||||||
Sbjct: 657 cggcgcgccacacggcgctgttgcacttgaacc 689
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                 
Query: 387      cggcgcgccacacggcgctgttgcacttgaacc 419
                |||||||||||||||||||||||||||||||||
Sbjct: 41345815 cggcgcgccacacggcgctgttgcacttgaacc 41345847



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 389      gcgcgccacacggcgctgttgcacttgaa 417
                |||||||| |||| |||||||||||||||
Sbjct: 19951176 gcgcgccagacggtgctgttgcacttgaa 19951148
to top
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432C03
          Length = 164394

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                              
Query: 387   cggcgcgccacacggcgctgttgcacttgaacc 419
             |||||||||||||||||||||||||||||||||
Sbjct: 37308 cggcgcgccacacggcgctgttgcacttgaacc 37340
to top
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 389  gcgcgccacacggcgctgttgcacttgaacc 419
            ||||||||||| |||||||||||||||||||
Sbjct: 5414 gcgcgccacacagcgctgttgcacttgaacc 5384
to top
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region
          Length = 90923

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 389   gcgcgccacacggcgctgttgcacttgaacc 419
             ||||||||||| |||||||||||||||||||
Sbjct: 10233 gcgcgccacacagcgctgttgcacttgaacc 10263
to top
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence
          Length = 962

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 393 gccacacggcgctgttgcacttgaacc 419
           |||||||||||||||||||||||||||
Sbjct: 409 gccacacggcgctgttgcacttgaacc 383
to top
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA
            synthase (OSJNBa0032I20.8), mRNA
          Length = 1572

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 394  ccacacggcgctgttgcacttgaacc 419
            ||||||||||||||||||||||||||
Sbjct: 1437 ccacacggcgctgttgcacttgaacc 1412
to top
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10,
              complete sequence
          Length = 170681

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 394    ccacacggcgctgttgcacttgaacc 419
              ||||||||||||||||||||||||||
Sbjct: 138186 ccacacggcgctgttgcacttgaacc 138211
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 394      ccacacggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||||||
Sbjct: 21614667 ccacacggcgctgttgcacttgaacc 21614692



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 398      acggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||
Sbjct: 23418015 acggcgctgttgcacttgaacc 23417994
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 394      ccacacggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||||||
Sbjct: 14046782 ccacacggcgctgttgcacttgaacc 14046807



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 389      gcgcgccacacggcgctgttgcacttgaa 417
                |||||||| ||||||||||||||||||||
Sbjct: 11266867 gcgcgccagacggcgctgttgcacttgaa 11266895



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 389     gcgcgccacacggcgctgttgcacttgaa 417
               |||||||| ||||||||||||||||||||
Sbjct: 3638999 gcgcgccagacggcgctgttgcacttgaa 3639027
to top
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 394   ccacacggcgctgttgcacttgaacc 419
             ||||||||||||||||||||||||||
Sbjct: 62911 ccacacggcgctgttgcacttgaacc 62936
to top
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full
            insert sequence
          Length = 1536

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 394  ccacacggcgctgttgcacttgaacc 419
            ||||||||||||||||||||||||||
Sbjct: 1182 ccacacggcgctgttgcacttgaacc 1157
to top
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full
           insert sequence
          Length = 1040

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 394 ccacacggcgctgttgcacttgaacc 419
           ||||||||||||||||||||||||||
Sbjct: 709 ccacacggcgctgttgcacttgaacc 684
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 394      ccacacggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||||||
Sbjct: 14055024 ccacacggcgctgttgcacttgaacc 14055049



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 389      gcgcgccacacggcgctgttgcacttgaa 417
                |||||||| ||||||||||||||||||||
Sbjct: 11273307 gcgcgccagacggcgctgttgcacttgaa 11273335



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 389     gcgcgccacacggcgctgttgcacttgaa 417
               |||||||| ||||||||||||||||||||
Sbjct: 3638920 gcgcgccagacggcgctgttgcacttgaa 3638948
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 394      ccacacggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||||||
Sbjct: 21924866 ccacacggcgctgttgcacttgaacc 21924891



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 398      acggcgctgttgcacttgaacc 419
                ||||||||||||||||||||||
Sbjct: 23727925 acggcgctgttgcacttgaacc 23727904
to top
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated
            protein 15 (OSJNBa0036D19.6), mRNA
          Length = 1797

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 389  gcgcgccacacggcgctgttgcacttgaa 417
            |||||||| ||||||||||||||||||||
Sbjct: 1481 gcgcgccagacggcgctgttgcacttgaa 1453
to top
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OJ1341F06.20), mRNA
          Length = 609

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 389 gcgcgccacacggcgctgttgcacttgaa 417
           |||||||| ||||||||||||||||||||
Sbjct: 52  gcgcgccagacggcgctgttgcacttgaa 80
to top
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
             complete sequence
          Length = 131922

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 389   gcgcgccacacggcgctgttgcacttgaa 417
             |||||||| ||||||||||||||||||||
Sbjct: 74855 gcgcgccagacggcgctgttgcacttgaa 74883
to top
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1341F06, from chromosome 10, complete
             sequence
          Length = 102520

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 389   gcgcgccacacggcgctgttgcacttgaa 417
             |||||||| ||||||||||||||||||||
Sbjct: 99588 gcgcgccagacggcgctgttgcacttgaa 99560
to top
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence
          Length = 144359

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 389   gcgcgccacacggcgctgttgcacttgaa 417
             |||||||| ||||||||||||||||||||
Sbjct: 71840 gcgcgccagacggcgctgttgcacttgaa 71868
to top
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1563

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 394  ccacacggcgctgttgcacttgaa 417
            ||||||||||||||||||||||||
Sbjct: 1455 ccacacggcgctgttgcacttgaa 1432
to top
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 394   ccacacggcgctgttgcacttgaa 417
             ||||||||||||||||||||||||
Sbjct: 40141 ccacacggcgctgttgcacttgaa 40164
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 394      ccacacggcgctgttgcacttgaa 417
                ||||||||||||||||||||||||
Sbjct: 28405217 ccacacggcgctgttgcacttgaa 28405240



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 393      gccacacggcgctgttgcacttgaacc 419
                |||| ||||||||||||||||||||||
Sbjct: 28059210 gccagacggcgctgttgcacttgaacc 28059236
to top
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full
            insert sequence
          Length = 2233

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 394  ccacacggcgctgttgcacttgaa 417
            ||||||||||||||||||||||||
Sbjct: 1914 ccacacggcgctgttgcacttgaa 1891
to top
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 393    gccacacggcgctgttgcacttgaacc 419
              |||| ||||||||||||||||||||||
Sbjct: 139375 gccagacggcgctgttgcacttgaacc 139401
to top
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 389   gcgcgccacacggcgctgttgcacttgaacc 419
             |||||||| || |||||||||||||||||||
Sbjct: 58471 gcgcgccagaccgcgctgttgcacttgaacc 58441
to top
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full
            insert sequence
          Length = 2378

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 393  gccacacggcgctgttgcacttgaacc 419
            |||| ||||||||||||||||||||||
Sbjct: 1700 gccagacggcgctgttgcacttgaacc 1674
to top
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full
            insert sequence
          Length = 2098

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 389  gcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| || |||||||||||||||||||
Sbjct: 1621 gcgcgccagaccgcgctgttgcacttgaacc 1591
to top
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full
            insert sequence
          Length = 2025

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 389  gcgcgccacacggcgctgttgcacttgaacc 419
            |||||||| || |||||||||||||||||||
Sbjct: 1621 gcgcgccagaccgcgctgttgcacttgaacc 1591
to top
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full
            insert sequence
          Length = 2356

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 393  gccacacggcgctgttgcacttgaacc 419
            |||| ||||||||||||||||||||||
Sbjct: 1701 gccagacggcgctgttgcacttgaacc 1675
to top
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 394  ccacacggcgctgttgcacttgaacc 419
            |||||| |||||||||||||||||||
Sbjct: 1557 ccacaccgcgctgttgcacttgaacc 1532
to top
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            B1112E06, complete sequence
          Length = 177488

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 398  acggcgctgttgcacttgaacc 419
            ||||||||||||||||||||||
Sbjct: 8675 acggcgctgttgcacttgaacc 8654
to top
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0091E08, complete sequence
          Length = 119526

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 398   acggcgctgttgcacttgaacc 419
             ||||||||||||||||||||||
Sbjct: 33528 acggcgctgttgcacttgaacc 33507
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 394     ccacacggcgctgttgcacttgaacc 419
               |||||| |||||||||||||||||||
Sbjct: 5930670 ccacaccgcgctgttgcacttgaacc 5930695



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 394      ccacacggcgctgttgcacttgaa 417
                |||| |||||||||||||||||||
Sbjct: 30520197 ccacgcggcgctgttgcacttgaa 30520174
to top
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0056C19
          Length = 147739

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 394    ccacacggcgctgttgcacttgaacc 419
              |||||| |||||||||||||||||||
Sbjct: 108891 ccacaccgcgctgttgcacttgaacc 108916
to top
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 394    ccacacggcgctgttgcacttgaacc 419
              |||||| |||||||||||||||||||
Sbjct: 160472 ccacaccgcgctgttgcacttgaacc 160497
to top
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full
            insert sequence
          Length = 1929

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 394  ccacacggcgctgttgcacttgaacc 419
            |||||| |||||||||||||||||||
Sbjct: 1557 ccacaccgcgctgttgcacttgaacc 1532
to top
>emb|AL109756.9|HSDJ617C6 Human DNA sequence from clone RP4-617C6 on chromosome 1p13.3-22.1
             Contains a novel gene, complete sequence
          Length = 111491

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aaagtccaaagtaatgaaatt 21
             |||||||||||||||||||||
Sbjct: 92800 aaagtccaaagtaatgaaatt 92820
to top
>emb|AL079334.7|HSJ300O13 Human DNA sequence from clone RP1-300O13 on chromosome Xq22.1-24
            Contains part of the AMMECR1 gene for Alport syndrome
            (mental retardation, midface hypoplasia and
            elliptocytosis, chromosomal region gene 1) (FLJ341111),
            complete sequence
          Length = 63660

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    aaagtccaaagtaatgaaatt 21
            |||||||||||||||||||||
Sbjct: 3081 aaagtccaaagtaatgaaatt 3061
to top
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 389   gcgcgccacacggcgctgttgcacttgaa 417
             |||||||| |||| |||||||||||||||
Sbjct: 54085 gcgcgccagacggtgctgttgcacttgaa 54057
to top
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    acaactgctacaacaccagca 152
              |||||||||||||||||||||
Sbjct: 187000 acaactgctacaacaccagca 186980
to top
>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9,
              complete sequence
          Length = 201771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 198    ttacatgcaaatccattagcc 218
              |||||||||||||||||||||
Sbjct: 163393 ttacatgcaaatccattagcc 163373
to top
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 394  ccacacggcgctgttgcacttgaa 417
            |||| |||||||||||||||||||
Sbjct: 1365 ccacgcggcgctgttgcacttgaa 1342
to top
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1575

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1394 acggcgctgttgcacttgaa 1375
to top
>emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid longase (fae2 gene)
          Length = 2018

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1580 acggcgctgttgcacttgaa 1561
to top
>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete
             sequence
          Length = 97057

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   atgattaaaacccttaataa 126
             ||||||||||||||||||||
Sbjct: 26015 atgattaaaacccttaataa 25996
to top
>ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4006-PA,
            isoform A (LOC582897), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   tttcacacaagagcgcgcac 69
            ||||||||||||||||||||
Sbjct: 1020 tttcacacaagagcgcgcac 1039
to top
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
             complete sequence
          Length = 177327

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   acggcgctgttgcacttgaa 417
             ||||||||||||||||||||
Sbjct: 40786 acggcgctgttgcacttgaa 40805
to top
>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence
          Length = 150334

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   caaatccattagcctgcact 224
             ||||||||||||||||||||
Sbjct: 78811 caaatccattagcctgcact 78830
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 394     ccacacggcgctgttgcacttgaa 417
               |||| |||||||||||||||||||
Sbjct: 8419680 ccacgcggcgctgttgcacttgaa 8419703
to top
>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   gcagtccagccaggggctcc 362
             ||||||||||||||||||||
Sbjct: 29847 gcagtccagccaggggctcc 29866
to top
>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence
          Length = 163781

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    atgattaaaacccttaataa 126
              ||||||||||||||||||||
Sbjct: 125752 atgattaaaacccttaataa 125771
to top
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11,
              complete sequence
          Length = 115403

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    acggcgctgttgcacttgaa 417
              ||||||||||||||||||||
Sbjct: 110089 acggcgctgttgcacttgaa 110108
to top
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0024O21, complete sequence
          Length = 155651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   acggcgctgttgcacttgaa 417
             ||||||||||||||||||||
Sbjct: 84686 acggcgctgttgcacttgaa 84705
to top
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   ccacacggcgctgttgcacttgaa 417
             |||| |||||||||||||||||||
Sbjct: 34381 ccacgcggcgctgttgcacttgaa 34404
to top
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   ccacacggcgctgttgcacttgaa 417
             |||| |||||||||||||||||||
Sbjct: 32205 ccacgcggcgctgttgcacttgaa 32182
to top
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0617A09
          Length = 134804

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 394    ccacacggcgctgttgcacttgaa 417
              |||| |||||||||||||||||||
Sbjct: 126245 ccacgcggcgctgttgcacttgaa 126222
to top
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full
            insert sequence
          Length = 1892

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1560 acggcgctgttgcacttgaa 1541
to top
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full
            insert sequence
          Length = 1892

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1560 acggcgctgttgcacttgaa 1541
to top
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full
            insert sequence
          Length = 1966

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1561 acggcgctgttgcacttgaa 1542
to top
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full
           insert sequence
          Length = 1408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 acggcgctgttgcacttgaa 417
           ||||||||||||||||||||
Sbjct: 962 acggcgctgttgcacttgaa 943
to top
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence
          Length = 932

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 acggcgctgttgcacttgaa 417
           ||||||||||||||||||||
Sbjct: 264 acggcgctgttgcacttgaa 283
to top
>gb|AY109713.2| Zea mays CL1191_1 mRNA sequence
          Length = 1949

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  acggcgctgttgcacttgaa 417
            ||||||||||||||||||||
Sbjct: 1548 acggcgctgttgcacttgaa 1529
to top
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence
          Length = 625

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 acggcgctgttgcacttgaa 417
           ||||||||||||||||||||
Sbjct: 404 acggcgctgttgcacttgaa 423
to top
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     ctacaacaccagcacaaatt 158
               ||||||||||||||||||||
Sbjct: 1715372 ctacaacaccagcacaaatt 1715353
to top
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ctacaacaccagcacaaatt 158
             ||||||||||||||||||||
Sbjct: 79459 ctacaacaccagcacaaatt 79478
to top
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105,
             complete sequence
          Length = 127990

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   ccacacggcgctgttgcacttgaa 417
             ||||||||||||||| ||||||||
Sbjct: 85489 ccacacggcgctgttacacttgaa 85512
to top
>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aagttgacataagtttcaca 56
             ||||||||||||||||||||
Sbjct: 86401 aagttgacataagtttcaca 86382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,765,411
Number of Sequences: 3902068
Number of extensions: 2765411
Number of successful extensions: 62679
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62062
Number of HSP's gapped (non-prelim): 616
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top