| Clone Name | rbast02c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PPCKC_PONPY (Q5R5J1) Phosphoenolpyruvate carboxykinase, cytosoli... | 28 | 8.3 | 2 | PPCKC_HUMAN (P35558) Phosphoenolpyruvate carboxykinase, cytosoli... | 28 | 8.3 |
|---|
>PPCKC_PONPY (Q5R5J1) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 197 SHPRARLCRPASRAPAHLQLQQEQPHAVP 283 +HP +R C PAS+ P + E P VP Sbjct: 400 AHPNSRFCTPASQCPI-IDAAWESPEGVP 427
>PPCKC_HUMAN (P35558) Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC| 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C) Length = 622 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 197 SHPRARLCRPASRAPAHLQLQQEQPHAVP 283 +HP +R C PAS+ P + E P VP Sbjct: 400 AHPNSRFCTPASQCPI-IDAAWESPEGVP 427 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,045,482 Number of Sequences: 219361 Number of extensions: 486265 Number of successful extensions: 1620 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1582 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1617 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)