ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast02b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYB5_ORYSA (P49100) Cytochrome b5 92 4e-19
2CYB52_ARATH (O48845) Probable cytochrome b5 isoform 2 87 2e-17
3CYB5S_TOBAC (P49099) Cytochrome b5, seed isoform 77 2e-14
4CYB5_TOBAC (P49098) Cytochrome b5 76 4e-14
5CYB5_CUSRE (P49097) Cytochrome b5 74 1e-13
6CYB51_ARATH (Q42342) Cytochrome b5 isoform 1 70 2e-12
7CYB5_BRAOB (P40934) Cytochrome b5 69 4e-12
8CYB5_BOROF (O04354) Cytochrome b5 69 4e-12
9ITIH3_HUMAN (Q06033) Inter-alpha-trypsin inhibitor heavy chain H... 29 5.3

>CYB5_ORYSA (P49100) Cytochrome b5|
          Length = 137

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSES 282
           + KY+PPKQPHYNQDKTPEFIIKILQFLVPLAILGLAV +RIYTKSES
Sbjct: 89  RTKYVPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAIRIYTKSES 136



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>CYB52_ARATH (O48845) Probable cytochrome b5 isoform 2|
          Length = 134

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKS 288
           KVKY PPKQPHYNQDKT EFIIK+LQFLVPLAILGLAV +RIYTKS
Sbjct: 88  KVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVGIRIYTKS 133



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>CYB5S_TOBAC (P49099) Cytochrome b5, seed isoform|
          Length = 135

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSES 282
           KVKY PPKQPHYNQDKT EFI+K+LQFLVPL ILG+A  V  YTK  +
Sbjct: 88  KVKYTPPKQPHYNQDKTTEFIVKLLQFLVPLIILGVAFGVHFYTKQSA 135



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>CYB5_TOBAC (P49098) Cytochrome b5|
          Length = 136

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSES 282
           K KY PP QPHYNQDKT EF++K+LQFLVPL ILG+A  +R YTK  S
Sbjct: 88  KTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLIILGVAFGIRFYTKQSS 135



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>CYB5_CUSRE (P49097) Cytochrome b5|
          Length = 135

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 34/48 (70%), Positives = 38/48 (79%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSES 282
           K  Y PPKQP YNQDKTP+FIIK+LQFLVPL ILG+AV +R Y K  S
Sbjct: 87  KTSYTPPKQPLYNQDKTPQFIIKLLQFLVPLIILGVAVGIRFYKKQSS 134



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>CYB51_ARATH (Q42342) Cytochrome b5 isoform 1|
          Length = 134

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -2

Query: 416 YMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSE 285
           Y+ P+QP YNQDKTPEFIIKILQFLVP+ ILGLA+ VR YTK +
Sbjct: 91  YVAPQQPAYNQDKTPEFIIKILQFLVPILILGLALVVRHYTKKD 134



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>CYB5_BRAOB (P40934) Cytochrome b5|
          Length = 134

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 416 YMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSE 285
           Y+ P QP YNQDKTPEF+IKILQFLVP+ ILGLA+ VR YTK E
Sbjct: 91  YVAPVQPAYNQDKTPEFMIKILQFLVPILILGLALVVRQYTKKE 134



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>CYB5_BOROF (O04354) Cytochrome b5|
          Length = 132

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = -2

Query: 425 KVKYMPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVPVRIYTKSES 282
           +VKY PPKQP YN DKT EF+IK+LQFLVPL IL  A+ +R YTKS +
Sbjct: 85  QVKYTPPKQPLYNPDKTREFVIKLLQFLVPLVILAGAIGIRFYTKSSA 132



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>ITIH3_HUMAN (Q06033) Inter-alpha-trypsin inhibitor heavy chain H3 precursor|
           (ITI heavy chain H3) (Inter-alpha-inhibitor heavy chain
           3) (Serum-derived hyaluronan-associated protein) (SHAP)
          Length = 885

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 416 YMPPKQPHYNQDKTPEFIIKI 354
           Y PP+ P+Y  D  P FII+I
Sbjct: 634 YQPPQNPYYYVDGDPHFIIQI 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,792,135
Number of Sequences: 219361
Number of extensions: 1008579
Number of successful extensions: 2074
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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