ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast01f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104879.1| Zea mays PCO135342 mRNA sequence 135 1e-28
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
3dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
4dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
5dbj|D38011.1|RICRPS31 Oryza sativa (japonica cultivar-group) mRN... 76 9e-11
6ref|XM_470096.1| Oryza sativa (japonica cultivar-group), mRNA 66 8e-08
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 8e-08
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
9gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 66 8e-08
10gb|BT016216.1| Zea mays clone Contig49 mRNA sequence 58 2e-05
11dbj|AK109021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
12gb|AY106241.1| Zea mays PCO086893 mRNA sequence 58 2e-05
13ref|XM_475416.1| Oryza sativa (japonica cultivar-group), predic... 54 3e-04
14dbj|AK061933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
15dbj|AK119797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
16dbj|AK119693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
17dbj|AK119683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
18dbj|AK098982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
19gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
21gb|AF079900.1|AF079900 Streptomyces rimosus tetracycline efflux ... 52 0.001
22gb|AF061335.1|AF061335 Streptomyces rimosus oxytetracycline expo... 52 0.001
23gb|M20370.1|STMTETA S.rimosus tetracycline-resistance determinan... 52 0.001
24dbj|AK121584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.078
25emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.31
26emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 44 0.31
27gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 1.2
28gb|AE012331.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.2
29gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.2
30gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, comple... 42 1.2
31gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.2
32gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.2
33gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.2
34gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.2
35gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.8
36ref|XM_512683.1| PREDICTED: Pan troglodytes LOC456056 (LOC456056... 40 4.8
37gb|BT019264.1| Zea mays clone Contig937.F mRNA sequence 40 4.8
38ref|NM_030622.6| Homo sapiens cytochrome P450, family 2, subfami... 40 4.8
39gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, co... 40 4.8
40ref|XM_583780.2| PREDICTED: Bos taurus similar to beta-1,4-manno... 40 4.8
41ref|NM_007734.1| Mus musculus procollagen, type IV, alpha 3 (Col... 40 4.8
42gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, comp... 40 4.8
43gb|AY657573.1| Synthetic construct Peudomonas aeruginosa clone F... 40 4.8
44ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 4.8
45gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 4.8
46gb|BC033691.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 4.8
47gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 4.8
48ref|XM_748937.1| Aspergillus fumigatus Af293 hypothetical protei... 40 4.8
49gb|AY358603.1| Homo sapiens clone DNA76395 Cytochrome p450 (UNQ8... 40 4.8
50gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 4.8
51gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.8
52emb|AJ969056.1| Triticum aestivum mRNA for glycosyltransferase (... 40 4.8
53emb|BX035466.1|CNS08ZJ2 Single read from an extremity of a full-... 40 4.8
54emb|BX031918.1|CNS08WSI Single read from an extremity of a full-... 40 4.8
55emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.8
56emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.8
57emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.8
58emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 4.8
59emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 4.8
60emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 4.8
61emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 4.8
62emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 4.8
63gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 40 4.8
64dbj|AK027605.1| Homo sapiens cDNA FLJ14699 fis, clone NT2RP20065... 40 4.8
65gb|AE011662.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.8
66gb|AC007655.1| Homo sapiens 12p13 BAC RPCI11-233G1 (Roswell Park... 40 4.8
67dbj|AK137844.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 4.8
68gb|AF335278.1|AF335278 Homo sapiens cytochrome P450 2S1 (CYP2S1)... 40 4.8
69gb|AC022354.1|AC022354 Arabidopsis thaliana chromosome 1 BAC F9I... 40 4.8
70gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195... 40 4.8
71dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.8
72gb|AE004513.1| Pseudomonas aeruginosa PAO1, section 74 of 529 of... 40 4.8
73gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete... 40 4.8
74ref|XM_216893.3| PREDICTED: Rattus norvegicus cleavage and polya... 40 4.8
75gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.8
76dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.8
77gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 4.8
78gb|AF169387.1|AF169387 Mus musculus alpha 3 collagen IV (Col4a3)... 40 4.8
79gb|AY110541.1| Zea mays CL4825_1 mRNA sequence 40 4.8
80gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, comple... 40 4.8
81dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.8
82gb|AY823670.1| Mus musculus 2010007H12Rik (2010007H12Rik), BIPL1... 40 4.8
83gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 m... 40 4.8 
>gb|AY104879.1| Zea mays PCO135342 mRNA sequence
          Length = 916

 Score =  135 bits (68), Expect = 1e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                       
Query: 264 ggcctagggccgtcgtccctgcgcctgaaacgctgcggnggctcacggttcctcctgttc 323
           ||||| ||||| || |||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 417 ggccttgggccatcatcccggcgcctgaaacgctgcgggggctcacggttcctcctgttc 358

                                              
Query: 324 tcacgggagcggacacggacaatgtgagcatggat 358
           ||||| |||||||||||||||||||| ||||||||
Sbjct: 357 tcacgagagcggacacggacaatgtgcgcatggat 323
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                  
Query: 309      cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggat 358
                |||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 35147690 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggat 35147641
to top
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                               
Query: 309   cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggat 358
             |||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 26774 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggat 26725
to top
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485B12
          Length = 156047

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                
Query: 309    cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggat 358
              |||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 154840 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggat 154791
to top
>dbj|D38011.1|RICRPS31 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein
           S31, complete cds
          Length = 552

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 309 cggttcctcctgttctcacgggagcggacacggacaatgtgagcatggat 358
           |||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 334 cggtccctccggttctcacgggagcggacacggacgatgtgagcatggat 285
to top
>ref|XM_470096.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 327

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
           |||||| ||||||| |||||||  ||||||  |||||||||||||| |  ||||| ||||
Sbjct: 313 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 254

                           
Query: 340 ggacaatgtgagcatg 355
            |||||||||||||||
Sbjct: 253 tgacaatgtgagcatg 238
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                            
Query: 280      ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
                |||||| ||||||| |||||||  ||||||  |||||||||||||| |  ||||| ||||
Sbjct: 33912545 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 33912486

                                
Query: 340      ggacaatgtgagcatg 355
                 |||||||||||||||
Sbjct: 33912485 tgacaatgtgagcatg 33912470
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                            
Query: 280      ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
                |||||| ||||||| |||||||  ||||||  |||||||||||||| |  ||||| ||||
Sbjct: 34003017 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 34002958

                                
Query: 340      ggacaatgtgagcatg 355
                 |||||||||||||||
Sbjct: 34002957 tgacaatgtgagcatg 34002942
to top
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
              sequence
          Length = 172337

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 280    ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
              |||||| ||||||| |||||||  ||||||  |||||||||||||| |  ||||| ||||
Sbjct: 145146 ccctgcacctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacac 145205

                              
Query: 340    ggacaatgtgagcatg 355
               |||||||||||||||
Sbjct: 145206 tgacaatgtgagcatg 145221
to top
>gb|BT016216.1| Zea mays clone Contig49 mRNA sequence
          Length = 749

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| |||| ||| ||||  |||| ||| |  ||||||||||| ||||| 
Sbjct: 464 tccctgcgcctgaagcgctccggcggcttgcggtccctgcgcttctcacgggatcggacg 523

                               
Query: 339 cggacaatgtgagcatggat 358
           ||||| |||||||| |||||
Sbjct: 524 cggacgatgtgagcgtggat 543
to top
>dbj|AK109021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B01, full
           insert sequence
          Length = 974

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 288 ctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacacggacaatg 347
           |||||| |||||||  ||||||  |||||||||||||| |  ||||| |||| |||||||
Sbjct: 400 ctgaaatgctgcggaagctcacaattcctcctgttctcgcaagagcgaacactgacaatg 341

                   
Query: 348 tgagcatg 355
           ||||||||
Sbjct: 340 tgagcatg 333
to top
>gb|AY106241.1| Zea mays PCO086893 mRNA sequence
          Length = 791

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| |||| ||| ||||  |||| ||| |  ||||||||||| ||||| 
Sbjct: 435 tccctgcgcctgaagcgctccggcggcttgcggtccctgcgcttctcacgggatcggacg 376

                               
Query: 339 cggacaatgtgagcatggat 358
           ||||| |||||||| |||||
Sbjct: 375 cggacgatgtgagcgtggat 356
to top
>ref|XM_475416.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 585

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 488 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 429

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 428 cggacgatgtgggcgtggatgg 407
to top
>dbj|AK061933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D01, full
           insert sequence
          Length = 664

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 305 cggacgatgtgggcgtggatgg 284
to top
>dbj|AK119797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H04, full
           insert sequence
          Length = 616

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 305 cggacgatgtgggcgtggatgg 284
to top
>dbj|AK119693.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C03, full
           insert sequence
          Length = 618

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 365 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 306

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 305 cggacgatgtgggcgtggatgg 284
to top
>dbj|AK119683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A02, full
           insert sequence
          Length = 641

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 366 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 307

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 306 cggacgatgtgggcgtggatgg 285
to top
>dbj|AK098982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091A22, full
           insert sequence
          Length = 620

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 367 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 308

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||| ||||| || |||||||
Sbjct: 307 cggacgatgtgggcgtggatgg 286
to top
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0018K15, complete sequence
          Length = 168519

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                         
Query: 280   ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
             ||||||||||||| | || ||| |||   |||| ||| | |||||| |||||||||||||
Sbjct: 26800 ccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggacac 26859

                                  
Query: 340   ggacaatgtgagcatggatgg 360
             |||| ||||| || |||||||
Sbjct: 26860 ggacgatgtgggcgtggatgg 26880
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                            
Query: 280      ccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggacac 339
                ||||||||||||| | || ||| |||   |||| ||| | |||||| |||||||||||||
Sbjct: 23341264 ccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggacac 23341323

                                     
Query: 340      ggacaatgtgagcatggatgg 360
                |||| ||||| || |||||||
Sbjct: 23341324 ggacgatgtgggcgtggatgg 23341344
to top
>gb|AF079900.1|AF079900 Streptomyces rimosus tetracycline efflux protein (otrB) gene,
           complete cds
          Length = 1947

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 176 agcaggggcgccaggaacagcgccagcgcc 205
           ||||||||| ||||||||||||||||||||
Sbjct: 737 agcaggggcaccaggaacagcgccagcgcc 708
to top
>gb|AF061335.1|AF061335 Streptomyces rimosus oxytetracycline exporter (otrB) gene, complete
           cds
          Length = 1611

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 176 agcaggggcgccaggaacagcgccagcgcc 205
           ||||||||| ||||||||||||||||||||
Sbjct: 617 agcaggggcaccaggaacagcgccagcgcc 588
to top
>gb|M20370.1|STMTETA S.rimosus tetracycline-resistance determinant (tet347) gene,
           complete cds
          Length = 2052

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 176 agcaggggcgccaggaacagcgccagcgcc 205
           ||||||||| ||||||||||||||||||||
Sbjct: 844 agcaggggcaccaggaacagcgccagcgcc 815
to top
>dbj|AK121584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F24, full
           insert sequence
          Length = 947

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 279 tccctgcgcctgaaacgctgcggnggctcacggttcctcctgttctcacgggagcggaca 338
           |||||||||||||| | || ||| |||   |||| ||| | |||||| ||||||||||||
Sbjct: 366 tccctgcgcctgaacctctccggcggcctgcggtccctgcggttctcgcgggagcggaca 307

                                 
Query: 339 cggacaatgtgagcatggatgg 360
           ||||  ||||| || |||||||
Sbjct: 306 cggatgatgtgggcgtggatgg 285
to top
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 183    gcgccaggaacagcgccagcgc 204
              ||||||||||||||||||||||
Sbjct: 110059 gcgccaggaacagcgccagcgc 110038
to top
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 183    gcgccaggaacagcgccagcgc 204
              ||||||||||||||||||||||
Sbjct: 170095 gcgccaggaacagcgccagcgc 170116
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 225    ccaccagggcctccagcacggggcgggccacct 257
              ||||||| || ||||||||| ||||||||||||
Sbjct: 151183 ccaccagcgcttccagcacgtggcgggccacct 151215
to top
>gb|AE012331.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 239
            of 460 of the complete genome
          Length = 11445

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 204  ccagcaggcgcaccaccaggtccac 228
            |||||||||||||| ||||||||||
Sbjct: 7338 ccagcaggcgcaccgccaggtccac 7362
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 219    ccaggtccaccagggcctccagcac 243
              |||||||||||||||| ||||||||
Sbjct: 668599 ccaggtccaccagggcgtccagcac 668623



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 201     gcgccagcaggcgcaccacc 220
               ||||||||||||||||||||
Sbjct: 4485664 gcgccagcaggcgcaccacc 4485645
to top
>gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, complete sequence
          Length = 158472

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     aaaactagaatagttcaatat 105
              |||||||||||||||||||||
Sbjct: 142426 aaaactagaatagttcaatat 142406
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 190     gaacagcgccagcgccagcag 210
               |||||||||||||||||||||
Sbjct: 2550070 gaacagcgccagcgccagcag 2550090
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 204     ccagcaggcgcaccaccaggtccac 228
               |||||||||||||| ||||||||||
Sbjct: 2274269 ccagcaggcgcaccgccaggtccac 2274245
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 193     cagcgccagcgccagcaggcgcaccacca 221
               ||||||||||||||||||||  |||||||
Sbjct: 1717310 cagcgccagcgccagcaggctgaccacca 1717338
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 183     gcgccaggaacagcgccagcg 203
               |||||||||||||||||||||
Sbjct: 1721648 gcgccaggaacagcgccagcg 1721668
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     aacagcgccagcgccagcag 210
               ||||||||||||||||||||
Sbjct: 2318067 aacagcgccagcgccagcag 2318048
to top
>ref|XM_512683.1| PREDICTED: Pan troglodytes LOC456056 (LOC456056), mRNA
          Length = 995

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 65  caggagcagcgccagcgccagcag 42
to top
>gb|BT019264.1| Zea mays clone Contig937.F mRNA sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 181 gggcgccaggaacagcgccagcgccagcaggc 212
           ||||||||||| |||||||| | |||||||||
Sbjct: 509 gggcgccaggagcagcgccaccaccagcaggc 540
to top
>ref|NM_030622.6| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1
           (CYP2S1), mRNA
          Length = 2657

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 106 caggagcagcgccagcgccagcag 83
to top
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence
          Length = 160429

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 217  caccaggtccaccagggcctccag 240
            |||||||||||||||| |||||||
Sbjct: 9056 caccaggtccaccaggccctccag 9033
to top
>ref|XM_583780.2| PREDICTED: Bos taurus similar to beta-1,4-mannosyltransferase
           (LOC507210), partial mRNA
          Length = 1307

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 176 agcaggggcgccaggaacagcgccagcgccagcagg 211
           ||||| |||| ||||||||| | |||||||||||||
Sbjct: 56  agcagcggcggcaggaacagggacagcgccagcagg 21
to top
>ref|NM_007734.1| Mus musculus procollagen, type IV, alpha 3 (Col4a3), mRNA
          Length = 7765

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 217  caccaggtccaccagggcctccag 240
            |||||||||||||||| |||||||
Sbjct: 1643 caccaggtccaccaggccctccag 1666
to top
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   caccaggtccaccagggcctccag 240
             |||||||||||||||| |||||||
Sbjct: 24227 caccaggtccaccaggccctccag 24250
to top
>gb|AY657573.1| Synthetic construct Peudomonas aeruginosa clone FLH041006.01F
           PA0785 gene, partial cds
          Length = 639

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 gcgccagcgccagcaggcgc 214
           ||||||||||||||||||||
Sbjct: 628 gcgccagcgccagcaggcgc 609
to top
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    caggaacagcgccagcgccagcag 210
              ||||| ||||||||||||||||||
Sbjct: 395394 caggagcagcgccagcgccagcag 395371
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 187     caggaacagcgccagcgccagcag 210
               ||||||||||| ||||||||||||
Sbjct: 3463507 caggaacagcgtcagcgccagcag 3463484
to top
>gb|BC033691.1| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1,
           mRNA (cDNA clone MGC:44853 IMAGE:5212609), complete cds
          Length = 2619

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 68  caggagcagcgccagcgccagcag 45
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gccaggaacagcgccagcgc 204
               ||||||||||||||||||||
Sbjct: 2304511 gccaggaacagcgccagcgc 2304530
to top
>ref|XM_748937.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g06020)
           partial mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 agcgccagcgccagcaggcg 213
           ||||||||||||||||||||
Sbjct: 63  agcgccagcgccagcaggcg 44
to top
>gb|AY358603.1| Homo sapiens clone DNA76395 Cytochrome p450 (UNQ891) mRNA, complete
           cds
          Length = 2626

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 94  caggagcagcgccagcgccagcag 71
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    cctgcgcctgaaacgctgcg 300
              ||||||||||||||||||||
Sbjct: 460069 cctgcgcctgaaacgctgcg 460050
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     gccaggaacagcgccagcgccagc 208
               ||||||| ||||||||||||||||
Sbjct: 3637625 gccaggatcagcgccagcgccagc 3637602
to top
>emb|AJ969056.1| Triticum aestivum mRNA for glycosyltransferase (pglcat7 gene)
          Length = 1660

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 211 gcgcaccaccaggtccacca 230
           ||||||||||||||||||||
Sbjct: 377 gcgcaccaccaggtccacca 396
to top
>emb|BX035466.1|CNS08ZJ2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA6DC07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 402

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 gcgccagcgccagcaggcgc 214
           ||||||||||||||||||||
Sbjct: 380 gcgccagcgccagcaggcgc 361
to top
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 626

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 gcgccagcgccagcaggcgc 214
           ||||||||||||||||||||
Sbjct: 566 gcgccagcgccagcaggcgc 547
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    cagcgccagcgccagcaggc 212
              ||||||||||||||||||||
Sbjct: 127602 cagcgccagcgccagcaggc 127621
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cagcgccagcaggcgcacca 218
              ||||||||||||||||||||
Sbjct: 102180 cagcgccagcaggcgcacca 102161
to top
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    gccaggaacagcgccagcgccagc 208
              ||||||| ||||||||||||||||
Sbjct: 297962 gccaggagcagcgccagcgccagc 297939
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   cagcgccagcaggcgcacca 218
             ||||||||||||||||||||
Sbjct: 13081 cagcgccagcaggcgcacca 13062
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    gccaggaacagcgccagcgccagc 208
              ||||||| ||||||||||||||||
Sbjct: 243450 gccaggagcagcgccagcgccagc 243427
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    cagcgccagcgccagcaggc 212
              ||||||||||||||||||||
Sbjct: 178780 cagcgccagcgccagcaggc 178761
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cagcgccagcaggcgcacca 218
              ||||||||||||||||||||
Sbjct: 297984 cagcgccagcaggcgcacca 297965
to top
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 193   cagcgccagcgccagcaggcgcaccacc 220
             |||||||||||||||||| | |||||||
Sbjct: 50798 cagcgccagcgccagcagtctcaccacc 50825
to top
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
              biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 182    ggcgccaggaacagcgccagcgccagca 209
              ||||||||  ||||||||||||||||||
Sbjct: 106714 ggcgccagacacagcgccagcgccagca 106687
to top
>dbj|AK027605.1| Homo sapiens cDNA FLJ14699 fis, clone NT2RP2006571, moderately
           similar to CYTOCHROME P450 2G1 (EC 1.14.14.1)
          Length = 2513

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 106 caggagcagcgccagcgccagcag 83
to top
>gb|AE011662.1| Xanthomonas axonopodis pv. citri str. 306,  section 40 of 469 of
           the complete genome
          Length = 11001

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 ggaacagcgccagcgccagc 208
           ||||||||||||||||||||
Sbjct: 676 ggaacagcgccagcgccagc 695
to top
>gb|AC007655.1| Homo sapiens 12p13 BAC RPCI11-233G1 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 180069

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aaaatataaagacctgatca 38
             ||||||||||||||||||||
Sbjct: 27468 aaaatataaagacctgatca 27449
to top
>dbj|AK137844.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130026I10
           product:unclassifiable, full insert sequence
          Length = 3211

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  aaaatataaagacctgatca 38
           ||||||||||||||||||||
Sbjct: 735 aaaatataaagacctgatca 716
to top
>gb|AF335278.1|AF335278 Homo sapiens cytochrome P450 2S1 (CYP2S1) mRNA, complete cds
          Length = 2261

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 caggaacagcgccagcgccagcag 210
           ||||| ||||||||||||||||||
Sbjct: 51  caggagcagcgccagcgccagcag 28
to top
>gb|AC022354.1|AC022354 Arabidopsis thaliana chromosome 1 BAC F9I5 genomic sequence, complete
             sequence
          Length = 46335

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    attgcagcaaaaactagaatagtt 99
             |||||| |||||||||||||||||
Sbjct: 12604 attgcaacaaaaactagaatagtt 12581
to top
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence
          Length = 129402

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   caggaacagcgccagcgccagcag 210
             ||||| ||||||||||||||||||
Sbjct: 21866 caggagcagcgccagcgccagcag 21843
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     gcaccaccaggtccaccagg 232
               ||||||||||||||||||||
Sbjct: 2579352 gcaccaccaggtccaccagg 2579333
to top
>gb|AE004513.1| Pseudomonas aeruginosa PAO1, section 74 of 529 of the complete genome
          Length = 15470

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   gcgccagcgccagcaggcgc 214
             ||||||||||||||||||||
Sbjct: 10368 gcgccagcgccagcaggcgc 10349
to top
>gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete sequence
          Length = 27323

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    gaaattgtcaaaatataaagacct 33
             |||||||||| |||||||||||||
Sbjct: 20760 gaaattgtcataatataaagacct 20737
to top
>ref|XM_216893.3| PREDICTED: Rattus norvegicus cleavage and polyadenylation specific
            factor 6, 68kDa (predicted) (Cpsf6_predicted), mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 215  accaccaggtccaccagggcctcc 238
            |||||||||||||| |||||||||
Sbjct: 1341 accaccaggtccactagggcctcc 1364
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 183     gcgccaggaacagcgccagcgcca 206
               ||||| ||||||||||||||||||
Sbjct: 4187591 gcgccgggaacagcgccagcgcca 4187568



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 189     ggaacagcgccagcgccagcaggc 212
               |||||||||||||| |||||||||
Sbjct: 1926381 ggaacagcgccagcaccagcaggc 1926358
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    cagcgccagcgccagcaggc 212
              ||||||||||||||||||||
Sbjct: 858815 cagcgccagcgccagcaggc 858796
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    ccaccagggcctccagcacg 244
              ||||||||||||||||||||
Sbjct: 158313 ccaccagggcctccagcacg 158332
to top
>gb|AF169387.1|AF169387 Mus musculus alpha 3 collagen IV (Col4a3) mRNA, complete cds
          Length = 7765

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 217  caccaggtccaccagggcctccag 240
            |||||||||||||||| |||||||
Sbjct: 1643 caccaggtccaccaggccctccag 1666
to top
>gb|AY110541.1| Zea mays CL4825_1 mRNA sequence
          Length = 837

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 cagcgccagcgccagcaggc 212
           ||||||||||||||||||||
Sbjct: 125 cagcgccagcgccagcaggc 106
to top
>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence
          Length = 194931

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aaaatataaagacctgatca 38
             ||||||||||||||||||||
Sbjct: 92608 aaaatataaagacctgatca 92627
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     ccaccaggtccaccagggcctcca 239
               ||||||| ||||||||||||||||
Sbjct: 1638372 ccaccagctccaccagggcctcca 1638349
to top
>gb|AY823670.1| Mus musculus 2010007H12Rik (2010007H12Rik), BIPL1 (Bipl1), ZCWPW1
             (Zcwpw1), and PILRA (Pilra) genes, complete cds; PILRP5
             (Pilrp5) pseudogene, complete sequence; PILRB (Pilrb)
             gene, complete cds; PILRP4 (Pilrp4) pseudogene, complete
             sequence; PILRB2 (Pilrb2) gene, complete cds; PILRP3
             (Pilrp3), PILRP2 (Pilrp2), and PILRP1 (Pilrp1)
             pseudogenes, complete sequence; and CYP3A13 (Cyp3a13) and
             GJE1 (Gje1) genes, complete cds
          Length = 194414

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aaaatataaagacctgatca 38
             ||||||||||||||||||||
Sbjct: 20405 aaaatataaagacctgatca 20386
to top
>gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 map 5, complete sequence
          Length = 203821

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aaaatataaagacctgatca 38
              ||||||||||||||||||||
Sbjct: 120295 aaaatataaagacctgatca 120314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,791,986
Number of Sequences: 3902068
Number of extensions: 2791986
Number of successful extensions: 60616
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58773
Number of HSP's gapped (non-prelim): 1836
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top