>SYL_BUCAP (Q8K9B9) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 861

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = +2

Query: 2   PGESQQFWHLAPSHNSNVHRFLVKN*EHKPPQGLHRKFGNHTKVTQHGKKKIPKNGR*YR 181
           PG +Q  W+ +  HN  + ++++KN ++K  Q LH  F     +  +  +    N   Y 
Sbjct: 339 PGHNQNDWNFSIKHNLKI-KYVIKNKKYKNTQ-LHNLFTTEKGILYNSGE---FNNLNYH 393

Query: 182 NDTVILKDLLIQIRI 226
           N T  +K  L++ +I
Sbjct: 394 NATEKIKKTLLKKKI 408

>RS6_NITOC (Q3JEJ6) 30S ribosomal protein S6|
          Length = 156

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 176 YRNDTVILKDLLIQIRIAITNKKPLVKGNRAKQKGKQGY 292
           +R +  +L+D++I+   AIT   PL KG   ++ G +GY
Sbjct: 78  FRFNDAVLRDMVIRREEAITETSPLAKG---EESGGRGY 113

>IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1|
           protease)
          Length = 1849

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = +2

Query: 5   GESQQFWHLAPSHNSNVHRFLVKN*EHKPPQGLHRKFGNH-TKVTQHGKKKIPKNGR*YR 181
           GES + W      +    R ++ +  ++   G +  FG   TK TQ+GK  +  NG+  +
Sbjct: 631 GESNENWLYMGRTSDEAKRNVMNHINNERMNGFNGYFGEEETKATQNGKLNVTFNGKSDQ 690

Query: 182 NDTVILKDLLIQIRIAITNKKPLVKGNRAKQKGKQGYPGRNTP 310
           N            R  +T    L  G+   +KG     GR TP
Sbjct: 691 N------------RFLLTGGTNL-NGDLNVEKGTLFLSGRPTP 720

>TMEM8_MOUSE (Q9ESN3) Transmembrane protein 8 precursor (M83 protein)|
          Length = 769

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 240 LFVIAILI*ISRSFNITVSFLYYRPFFGIFFFPC 139
           +F+  I I + RSF +  S  +Y  FF  F+  C
Sbjct: 555 MFLAPIAISLHRSFLVEASVYFYTMFFSTFYHAC 588

>Y1880_SYNY3 (P74125) Hypothetical UPF0047 protein sll1880|
          Length = 147

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +2

Query: 155 IPKNGR*YRNDTVILKDLLIQIRIAITNKK---PLVKG 259
           +P++GR YR+ T  L D+   IR A+T      P+V G
Sbjct: 78  VPEDGRRYRHSTEGLDDMPAHIRSALTKTSEHIPIVNG 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,559,685
Number of Sequences: 219361
Number of extensions: 1055050
Number of successful extensions: 2496
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2490
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)