ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast01e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468738.1| Oryza sativa (japonica cultivar-group), mRNA 260 2e-66
2gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 260 2e-66
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 260 2e-66
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 260 2e-66
5dbj|AK070282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 2e-66
6gb|AY106713.1| Zea mays PCO091216 mRNA sequence 172 4e-40
7ref|XM_480561.1| Oryza sativa (japonica cultivar-group), mRNA 76 8e-11
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 76 8e-11
9dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic D... 76 8e-11
10dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic D... 76 8e-11
11ref|XM_480551.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
12dbj|AK105852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
13gb|U09269.1|TAU09269 Thunbergia alata delta6-palmitoyl-acyl carr... 46 0.069
14dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 44 0.27
15dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.27
16gb|U07597.1|TAU07597 Thunbergia alata clone pTAD2 delta-9 stearo... 44 0.27
17emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 42 1.1
18gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, p... 40 4.2
19ref|NM_033513.1| Homo sapiens chromosome 19 open reading frame 2... 40 4.2
20gb|BC009520.1| Homo sapiens chromosome 19 open reading frame 20,... 40 4.2
21gb|AC099609.8| Mus musculus chromosome 7, clone RP23-376D24, com... 40 4.2
22dbj|AK126170.1| Homo sapiens cDNA FLJ44182 fis, clone THYMU20383... 40 4.2
23gb|AC011531.7|AC011531 Homo sapiens chromosome 19 clone LLNLR-23... 40 4.2
24dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 4.2
25gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 4.2
26dbj|AP006104.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 4.2
27emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chr... 40 4.2 
>ref|XM_468738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1496

 Score =  260 bits (131), Expect = 2e-66
 Identities = 229/261 (87%), Gaps = 3/261 (1%)
 Strand = Plus / Minus

                                                                        
Query: 64   tcagcccaccatgacgtgcctatcgaatatccaactgaagcgggccggcctgagctcgct 123
            |||||||| ||||||| |||||||||| ||||| ||||| ||||||     | ||||| |
Sbjct: 1268 tcagcccagcatgacgggcctatcgaagatccagctgaaacgggccatggcgggctcgat 1209

                                                                        
Query: 124  acgggccgccctctggtgtgccagttcctccatcctccggatcttgggcggcagcccgca 183
             |||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 1208 gcgggccgccctccggtgggccagctcctccatcctccggatcttgggcgccaacccgca 1149

                                                                        
Query: 184  cacgtactcctgcgcgcggcggccctctccagagagcccggc---gagctccgccacccg 240
            || ||||||||||||||| |||||||| || |||||||| ||   |||||||||||||||
Sbjct: 1148 caggtactcctgcgcgcgtcggccctcgccggagagccccgccgcgagctccgccacccg 1089

                                                                        
Query: 241  ccacctgcgcacgaagtgctccaccagatcgccgtagtccctcgccgtgtacacgccggc 300
            |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 1088 ccacctccgcacgaagtgctcgacgaggtcgccgtagtccctcgccgtgtacacgccggc 1029

                                 
Query: 301  acgctgcgccacggcggagaa 321
             |||| |||||||||||||||
Sbjct: 1028 gcgctccgccacggcggagaa 1008
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score =  260 bits (131), Expect = 2e-66
 Identities = 229/261 (87%), Gaps = 3/261 (1%)
 Strand = Plus / Minus

                                                                          
Query: 64     tcagcccaccatgacgtgcctatcgaatatccaactgaagcgggccggcctgagctcgct 123
              |||||||| ||||||| |||||||||| ||||| ||||| ||||||     | ||||| |
Sbjct: 127755 tcagcccagcatgacgggcctatcgaagatccagctgaaacgggccatggcgggctcgat 127696

                                                                          
Query: 124    acgggccgccctctggtgtgccagttcctccatcctccggatcttgggcggcagcccgca 183
               |||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 127695 gcgggccgccctccggtgggccagctcctccatcctccggatcttgggcgccaacccgca 127636

                                                                          
Query: 184    cacgtactcctgcgcgcggcggccctctccagagagcccggc---gagctccgccacccg 240
              || ||||||||||||||| |||||||| || |||||||| ||   |||||||||||||||
Sbjct: 127635 caggtactcctgcgcgcgtcggccctcgccggagagccccgccgcgagctccgccacccg 127576

                                                                          
Query: 241    ccacctgcgcacgaagtgctccaccagatcgccgtagtccctcgccgtgtacacgccggc 300
              |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 127575 ccacctccgcacgaagtgctcgacgaggtcgccgtagtccctcgccgtgtacacgccggc 127516

                                   
Query: 301    acgctgcgccacggcggagaa 321
               |||| |||||||||||||||
Sbjct: 127515 gcgctccgccacggcggagaa 127495
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  260 bits (131), Expect = 2e-66
 Identities = 229/261 (87%), Gaps = 3/261 (1%)
 Strand = Plus / Plus

                                                                            
Query: 64       tcagcccaccatgacgtgcctatcgaatatccaactgaagcgggccggcctgagctcgct 123
                |||||||| ||||||| |||||||||| ||||| ||||| ||||||     | ||||| |
Sbjct: 17435988 tcagcccagcatgacgggcctatcgaagatccagctgaaacgggccatggcgggctcgat 17436047

                                                                            
Query: 124      acgggccgccctctggtgtgccagttcctccatcctccggatcttgggcggcagcccgca 183
                 |||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 17436048 gcgggccgccctccggtgggccagctcctccatcctccggatcttgggcgccaacccgca 17436107

                                                                            
Query: 184      cacgtactcctgcgcgcggcggccctctccagagagcccggc---gagctccgccacccg 240
                || ||||||||||||||| |||||||| || |||||||| ||   |||||||||||||||
Sbjct: 17436108 caggtactcctgcgcgcgtcggccctcgccggagagccccgccgcgagctccgccacccg 17436167

                                                                            
Query: 241      ccacctgcgcacgaagtgctccaccagatcgccgtagtccctcgccgtgtacacgccggc 300
                |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 17436168 ccacctccgcacgaagtgctcgacgaggtcgccgtagtccctcgccgtgtacacgccggc 17436227

                                     
Query: 301      acgctgcgccacggcggagaa 321
                 |||| |||||||||||||||
Sbjct: 17436228 gcgctccgccacggcggagaa 17436248
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  260 bits (131), Expect = 2e-66
 Identities = 229/261 (87%), Gaps = 3/261 (1%)
 Strand = Plus / Plus

                                                                            
Query: 64       tcagcccaccatgacgtgcctatcgaatatccaactgaagcgggccggcctgagctcgct 123
                |||||||| ||||||| |||||||||| ||||| ||||| ||||||     | ||||| |
Sbjct: 17429529 tcagcccagcatgacgggcctatcgaagatccagctgaaacgggccatggcgggctcgat 17429588

                                                                            
Query: 124      acgggccgccctctggtgtgccagttcctccatcctccggatcttgggcggcagcccgca 183
                 |||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 17429589 gcgggccgccctccggtgggccagctcctccatcctccggatcttgggcgccaacccgca 17429648

                                                                            
Query: 184      cacgtactcctgcgcgcggcggccctctccagagagcccggc---gagctccgccacccg 240
                || ||||||||||||||| |||||||| || |||||||| ||   |||||||||||||||
Sbjct: 17429649 caggtactcctgcgcgcgtcggccctcgccggagagccccgccgcgagctccgccacccg 17429708

                                                                            
Query: 241      ccacctgcgcacgaagtgctccaccagatcgccgtagtccctcgccgtgtacacgccggc 300
                |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 17429709 ccacctccgcacgaagtgctcgacgaggtcgccgtagtccctcgccgtgtacacgccggc 17429768

                                     
Query: 301      acgctgcgccacggcggagaa 321
                 |||| |||||||||||||||
Sbjct: 17429769 gcgctccgccacggcggagaa 17429789
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>dbj|AK070282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047A21, full
            insert sequence
          Length = 1506

 Score =  260 bits (131), Expect = 2e-66
 Identities = 229/261 (87%), Gaps = 3/261 (1%)
 Strand = Plus / Minus

                                                                        
Query: 64   tcagcccaccatgacgtgcctatcgaatatccaactgaagcgggccggcctgagctcgct 123
            |||||||| ||||||| |||||||||| ||||| ||||| ||||||     | ||||| |
Sbjct: 1278 tcagcccagcatgacgggcctatcgaagatccagctgaaacgggccatggcgggctcgat 1219

                                                                        
Query: 124  acgggccgccctctggtgtgccagttcctccatcctccggatcttgggcggcagcccgca 183
             |||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 1218 gcgggccgccctccggtgggccagctcctccatcctccggatcttgggcgccaacccgca 1159

                                                                        
Query: 184  cacgtactcctgcgcgcggcggccctctccagagagcccggc---gagctccgccacccg 240
            || ||||||||||||||| |||||||| || |||||||| ||   |||||||||||||||
Sbjct: 1158 caggtactcctgcgcgcgtcggccctcgccggagagccccgccgcgagctccgccacccg 1099

                                                                        
Query: 241  ccacctgcgcacgaagtgctccaccagatcgccgtagtccctcgccgtgtacacgccggc 300
            |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 1098 ccacctccgcacgaagtgctcgacgaggtcgccgtagtccctcgccgtgtacacgccggc 1039

                                 
Query: 301  acgctgcgccacggcggagaa 321
             |||| |||||||||||||||
Sbjct: 1038 gcgctccgccacggcggagaa 1018
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>gb|AY106713.1| Zea mays PCO091216 mRNA sequence
          Length = 692

 Score =  172 bits (87), Expect = 4e-40
 Identities = 156/179 (87%)
 Strand = Plus / Minus

                                                                       
Query: 143 gccagttcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcgg 202
           ||||| ||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 308 gccagctcctccatcctgcggatcttgcgcggcagcccgcacacgtagtcttgcgcgcgg 249

                                                                       
Query: 203 cggccctctccagagagcccggcgagctccgccacccgccacctgcgcacgaagtgctcc 262
           || ||||| ||||| |||||   |||| ||| ||||| |||| |||||||||||||||||
Sbjct: 248 cgcccctcgccagacagcccctggagccccggcaccctccacgtgcgcacgaagtgctcc 189

                                                                      
Query: 263 accagatcgccgtagtccctcgccgtgtacacgccggcacgctgcgccacggcggagaa 321
           ||||  ||||||||||||  |||||||||||| ||||| ||||||||||| || |||||
Sbjct: 188 accatgtcgccgtagtccgccgccgtgtacaccccggcgcgctgcgccaccgccgagaa 130
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>ref|XM_480561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 149  tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
            ||||||||||||||||||||  |||||||| |||||||||| ||| ||||||| || |||
Sbjct: 1118 tcctccatcctccggatcttctgcggcagcgcgcacacgtagtcccgcgcgcgccgcccc 1059

                                                    
Query: 209  tctccagagagcccggcg---agctccgccacccgccacc 245
            || || |||||||| ||    ||||||||||| |||||||
Sbjct: 1058 tcgccggagagccccgcctccagctccgccacgcgccacc 1019
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Plus

                                                                           
Query: 149     tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
               ||||||||||||||||||||  |||||||| |||||||||| ||| ||||||| || |||
Sbjct: 5781490 tcctccatcctccggatcttctgcggcagcgcgcacacgtagtcccgcgcgcgccgcccc 5781549

                                                       
Query: 209     tctccagagagcccggcg---agctccgccacccgccacc 245
               || || |||||||| ||    ||||||||||| |||||||
Sbjct: 5781550 tcgccggagagccccgcctccagctccgccacgcgccacc 5781589



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 149     tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
               |||| |||||||||||||||  |||||||| |||||||||| ||| ||||||| || || 
Sbjct: 5745838 tccttcatcctccggatcttctgcggcagctcgcacacgtagtcccgcgcgcgccgccct 5745897

                             
Query: 209     tctccagagagccc 222
               || || ||||||||
Sbjct: 5745898 tcgccggagagccc 5745911
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>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0094P23
          Length = 149341

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Plus

                                                                          
Query: 149    tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
              ||||||||||||||||||||  |||||||| |||||||||| ||| ||||||| || |||
Sbjct: 136115 tcctccatcctccggatcttctgcggcagcgcgcacacgtagtcccgcgcgcgccgcccc 136174

                                                      
Query: 209    tctccagagagcccggcg---agctccgccacccgccacc 245
              || || |||||||| ||    ||||||||||| |||||||
Sbjct: 136175 tcgccggagagccccgcctccagctccgccacgcgccacc 136214



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 149    tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
              |||| |||||||||||||||  |||||||| |||||||||| ||| ||||||| || || 
Sbjct: 100463 tccttcatcctccggatcttctgcggcagctcgcacacgtagtcccgcgcgcgccgccct 100522

                            
Query: 209    tctccagagagccc 222
              || || ||||||||
Sbjct: 100523 tcgccggagagccc 100536
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>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0556A11
          Length = 138096

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Plus

                                                                         
Query: 149   tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
             ||||||||||||||||||||  |||||||| |||||||||| ||| ||||||| || |||
Sbjct: 35635 tcctccatcctccggatcttctgcggcagcgcgcacacgtagtcccgcgcgcgccgcccc 35694

                                                     
Query: 209   tctccagagagcccggcg---agctccgccacccgccacc 245
             || || |||||||| ||    ||||||||||| |||||||
Sbjct: 35695 tcgccggagagccccgcctccagctccgccacgcgccacc 35734
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>ref|XM_480551.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1564

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 149  tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
            |||| |||||||||||||||  |||||||| |||||||||| ||| ||||||| || || 
Sbjct: 1245 tccttcatcctccggatcttctgcggcagctcgcacacgtagtcccgcgcgcgccgccct 1186

                          
Query: 209  tctccagagagccc 222
            || || ||||||||
Sbjct: 1185 tcgccggagagccc 1172
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>dbj|AK105852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G10, full
            insert sequence
          Length = 1564

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 149  tcctccatcctccggatcttgggcggcagcccgcacacgtactcctgcgcgcggcggccc 208
            |||| |||||||||||||||  |||||||| |||||||||| ||| ||||||| || || 
Sbjct: 1245 tccttcatcctccggatcttctgcggcagctcgcacacgtagtcccgcgcgcgccgccct 1186

                          
Query: 209  tctccagagagccc 222
            || || ||||||||
Sbjct: 1185 tcgccggagagccc 1172
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>gb|U09269.1|TAU09269 Thunbergia alata delta6-palmitoyl-acyl carrier protein desaturase
            precursor mRNA, complete cds
          Length = 1259

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 172  cggcagcccgcacacgtactcctgcgcgcggcggccctc 210
            ||||| |||||||||||| |||||||| | |||||||||
Sbjct: 1087 cggcaacccgcacacgtaatcctgcgccctgcggccctc 1049
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 159     tccggatcttgggcggcagcccgcacacgt 188
               |||| |||||| ||||||||||||||||||
Sbjct: 2009732 tccgcatcttgtgcggcagcccgcacacgt 2009703
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>dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete
            sequence
          Length = 176713

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 139  gtgtgccagttcctccatcctc 160
            ||||||||||||||||||||||
Sbjct: 9594 gtgtgccagttcctccatcctc 9573
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>gb|U07597.1|TAU07597 Thunbergia alata clone pTAD2 delta-9 stearoyl-acyl carrier protein
            desaturase precursor mRNA, complete cds
          Length = 1337

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 178  cccgcacacgtactcctgcgcg 199
            ||||||||||||||||||||||
Sbjct: 1104 cccgcacacgtactcctgcgcg 1083
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   gagcccggcgagctccgccacccgc 241
             |||| ||||||||||||||||||||
Sbjct: 50458 gagcgcggcgagctccgccacccgc 50482
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>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cgaagtgctccaccagatcg 271
             ||||||||||||||||||||
Sbjct: 39788 cgaagtgctccaccagatcg 39769
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>ref|NM_033513.1| Homo sapiens chromosome 19 open reading frame 20 (C19orf20), mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gcgcggcggccctctccaga 216
           ||||||||||||||||||||
Sbjct: 794 gcgcggcggccctctccaga 775
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>gb|BC009520.1| Homo sapiens chromosome 19 open reading frame 20, mRNA (cDNA clone
           IMAGE:3637796), partial cds
          Length = 1069

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gcgcggcggccctctccaga 216
           ||||||||||||||||||||
Sbjct: 737 gcgcggcggccctctccaga 718
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>gb|AC099609.8| Mus musculus chromosome 7, clone RP23-376D24, complete sequence
          Length = 226284

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   ctggtgtgccagttcctccatcct 159
             ||||||||||||| ||||||||||
Sbjct: 92393 ctggtgtgccagtccctccatcct 92416
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>dbj|AK126170.1| Homo sapiens cDNA FLJ44182 fis, clone THYMU2038369, highly  similar
           to Mus musculus GTRGEO22 (Gtrgeo22) mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gcgcggcggccctctccaga 216
           ||||||||||||||||||||
Sbjct: 794 gcgcggcggccctctccaga 775
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>gb|AC011531.7|AC011531 Homo sapiens chromosome 19 clone LLNLR-231G5, complete sequence
          Length = 36377

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  gcgcggcggccctctccaga 216
            ||||||||||||||||||||
Sbjct: 8880 gcgcggcggccctctccaga 8861
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     ctcgccgtgtacacgccggc 300
               ||||||||||||||||||||
Sbjct: 1639353 ctcgccgtgtacacgccggc 1639372
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     gaagtgctccaccagatcgc 272
               ||||||||||||||||||||
Sbjct: 6946935 gaagtgctccaccagatcgc 6946954
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>dbj|AP006104.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10H09, TM0189,
             complete sequence
          Length = 92745

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 282   tcgccgtgtacacgccggcacgctgcgccacggcgg 317
             |||| |||||||||||||  ||||| ||||||||||
Sbjct: 12140 tcgcggtgtacacgccggtgcgctgtgccacggcgg 12175
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>emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chromosome X, complete
             sequence
          Length = 156879

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ggccgccctctggtgtgcca 146
             ||||||||||||||||||||
Sbjct: 31696 ggccgccctctggtgtgcca 31715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,766,579
Number of Sequences: 3902068
Number of extensions: 1766579
Number of successful extensions: 31343
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31236
Number of HSP's gapped (non-prelim): 102
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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