ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast01e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 697 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 659
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Plus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 3455048 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 3455107 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 3455108 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 3455146 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 362 gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 421 |||| |||||||||||||| ||| ||| ||||||| | || |||||||||||||||||| Sbjct: 25844286 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 25844227 Query: 422 agga 425 |||| Sbjct: 25844226 agga 25844223
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Plus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 71752 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 71811 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 71812 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 71850
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Plus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 146602 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 146661 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 146662 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 146700
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 697 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 659
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 757 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 698 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 697 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 659
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 340 ggggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccac 399 |||||||| ||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct: 1174 ggggcacttgaagccgggaggcgggtgcttgccgcaggtgatgagcagctcgagcgcgac 1115 Query: 400 cgggaggtagatgttgatgttgaggacccgcgcccggat 438 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 1114 ggggaggtagatgttgatgttgaggaggcgcgcgcggat 1076
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 1010 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 951 Query: 401 gggaggtagatgttgatgttgag 423 ||||||||||||||||||||||| Sbjct: 950 gggaggtagatgttgatgttgag 928
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 671 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 612 Query: 401 gggaggtagatgttgatgttgag 423 ||||||||||||||||||||||| Sbjct: 611 gggaggtagatgttgatgttgag 589
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 364 gtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttgag 423 |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 861 gtgcttgccgcaggtgatgagcaggttgagcgcgatggggaggtagatgttgatgttgag 802
>gb|AY094261.1| Zea mays cultivar C_9 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094260.1| Zea mays cultivar F_7 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094259.1| Zea mays cultivar D_9 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094258.1| Zea mays cultivar D_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094257.1| Zea mays cultivar F_1 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094256.1| Zea mays cultivar Mo17 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094255.1| Zea mays cultivar D_7 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094254.1| Zea mays cultivar Wf9Ht proline rich protein, 3' UTR and partial cds Length = 297 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 221 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 280 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 281 gggaggtagatgttgat 297
>gb|AY094251.1| Zea mays cultivar B84 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094250.1| Zea mays cultivar H60 proline rich protein, 3' UTR and partial cds Length = 303 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 286 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 287 gggaggtagatgttgat 303
>gb|AY094249.1| Zea mays cultivar DE811 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094248.1| Zea mays cultivar 684 proline rich protein, 3' UTR and partial cds Length = 313 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 237 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 296 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 297 gggaggtagatgttgat 313
>gb|AY094247.1| Zea mays cultivar D71-4HT proline rich protein, 3' UTR and partial cds Length = 307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 290 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 291 gggaggtagatgttgat 307
>gb|AY094246.1| Zea mays cultivar H99 proline rich protein, 3' UTR and partial cds Length = 307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 231 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 290 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 291 gggaggtagatgttgat 307
>gb|AY094245.1| Zea mays cultivar IVANA proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094244.1| Zea mays cultivar CO109 proline rich protein, 3' UTR and partial cds Length = 303 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 227 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 286 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 287 gggaggtagatgttgat 303
>gb|AY094243.1| Zea mays cultivar I_1 proline rich protein, 3' UTR and partial cds Length = 305 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 229 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 288 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 289 gggaggtagatgttgat 305
>gb|AY094242.1| Zea mays cultivar B73 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094241.1| Zea mays cultivar F_2 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094240.1| Zea mays cultivar G_1 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094239.1| Zea mays cultivar B_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094238.1| Zea mays cultivar H_4 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094237.1| Zea mays cultivar F_4 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094236.1| Zea mays cultivar F_3 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094235.1| Zea mays cultivar F_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094234.1| Zea mays cultivar H_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094233.1| Zea mays cultivar H_3 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094232.1| Zea mays cultivar J40 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094231.1| Zea mays cultivar 647 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094230.1| Zea mays cultivar B_1 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094229.1| Zea mays cultivar F_6 proline rich protein, 3' UTR and partial cds Length = 314 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 238 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 297 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 298 gggaggtagatgttgat 314
>gb|AY094228.1| Zea mays cultivar C_5 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>gb|AY094227.1| Zea mays cultivar H_1 proline rich protein, 3' UTR and partial cds Length = 315 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 341 gggcactggaagccgttgggcgggtgcttgccgcaggtgatgagcagccggagcgccacc 400 |||||||||||||| |||| |||||||||||||||||||||||| |||||| | Sbjct: 239 gggcactggaagcccgacggcgcgtgcttgccgcaggtgatgagcaggttgagcgcgatg 298 Query: 401 gggaggtagatgttgat 417 ||||||||||||||||| Sbjct: 299 gggaggtagatgttgat 315
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 362 gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 421 |||| |||||||||||||| ||| ||| ||||||| | || |||||||||||||||||| Sbjct: 126490 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 126431 Query: 422 agga 425 |||| Sbjct: 126430 agga 126427
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full insert sequence Length = 1338 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 362 gggtgcttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttg 421 |||| |||||||||||||| ||| ||| ||||||| | || |||||||||||||||||| Sbjct: 831 gggttcttgccgcaggtgaggaggagctggagcgcgaggggcaggtagatgttgatgttg 772 Query: 422 agga 425 |||| Sbjct: 771 agga 768
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence Length = 1420 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 367 cttgccgcaggtgatgagcagccggagcgccaccgggaggtagatgttgatgttgagga 425 |||||||||||||| ||| ||| ||||||||| || ||||||| |||||||||||||| Sbjct: 929 cttgccgcaggtgaggaggagctggagcgccagtggcaggtagaggttgatgttgagga 871
>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete sequence Length = 215366 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 304 catgcaggctaggctaggctaggc 327 |||||||||||||||||||||||| Sbjct: 139579 catgcaggctaggctaggctaggc 139602
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattattcaa 106 ||||||||||||||||||||||| Sbjct: 36206 atgttaattaattaattattcaa 36228
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 gcgggtgcttgccgcaggtgat 381 |||||||||||||||||||||| Sbjct: 2594989 gcgggtgcttgccgcaggtgat 2595010
>emb|Z69380.1|SPAC4H3 S.pombe chromosome I cosmid c4H3 Length = 34635 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 gttaattaattaattattcaa 106 ||||||||||||||||||||| Sbjct: 15265 gttaattaattaattattcaa 15285
>emb|BX511175.5| Zebrafish DNA sequence from clone DKEY-197A18 in linkage group 21, complete sequence Length = 231778 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 tgttaattaattaattattca 105 ||||||||||||||||||||| Sbjct: 161513 tgttaattaattaattattca 161493
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaac 107 ||||||||||||||||||||| Sbjct: 20641526 ttaattaattaattattcaac 20641546
>gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, complete sequence Length = 148332 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 ggtagatgttgatgttgagga 425 ||||||||||||||||||||| Sbjct: 94037 ggtagatgttgatgttgagga 94057
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaac 107 ||||||||||||||||||||| Sbjct: 35137 ttaattaattaattattcaac 35157
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaac 107 ||||||||||||||||||||| Sbjct: 107184 ttaattaattaattattcaac 107204
>emb|CR396590.9| Zebrafish DNA sequence from clone CH211-238P8 in linkage group 10, complete sequence Length = 153114 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 tgttaattaattaattattca 105 ||||||||||||||||||||| Sbjct: 17576 tgttaattaattaattattca 17556
>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence Length = 156592 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 catgttaattaattaattatt 103 ||||||||||||||||||||| Sbjct: 73994 catgttaattaattaattatt 74014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 catgttaattaattaattatt 103 ||||||||||||||||||||| Sbjct: 73846 catgttaattaattaattatt 73866
>emb|AL845426.9| Mouse DNA sequence from clone RP23-289M11 on chromosome 2, complete sequence Length = 181434 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 catgttaattaattaattatt 103 ||||||||||||||||||||| Sbjct: 123608 catgttaattaattaattatt 123628
>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence Length = 186611 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcacaattgaaaattataaa 26 |||||||||||||||||||| Sbjct: 17784 tcacaattgaaaattataaa 17765
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 13834 acatgttaattaattaatta 13815
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence Length = 210979 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 aggctaggctaggctaggcg 328 |||||||||||||||||||| Sbjct: 136589 aggctaggctaggctaggcg 136570
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence Length = 170718 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 59390 caggctaggctaggctaggc 59409
>gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome 14, complete sequence Length = 242114 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 51375 ttaattaattaattattcaa 51394
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcacaattgaaaattataaa 26 |||||||||||||||||||| Sbjct: 1903844 tcacaattgaaaattataaa 1903825
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 72803 caggctaggctaggctaggc 72822
>gb|AC123860.4| Mus musculus BAC clone RP23-349N13 from chromosome 14, complete sequence Length = 191104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 102194 atgttaattaattaattatt 102213
>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete sequence Length = 135495 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 18328 atgttaattaattaattatt 18347 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 9236 atgttaattaattaattatt 9255
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 101172 caggctaggctaggctaggc 101191
>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence Length = 196490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 113292 atgttaattaattaattatt 113311
>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence Length = 173862 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gttaattaattaattattca 105 |||||||||||||||||||| Sbjct: 90098 gttaattaattaattattca 90117
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 57997 acatgttaattaattaatta 57978
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence Length = 126541 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaacatc 110 ||||||||||||||||||| |||| Sbjct: 107467 ttaattaattaattattcatcatc 107444
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaacatc 110 ||||||||||||||||||| |||| Sbjct: 91278 ttaattaattaattattcatcatc 91301
>emb|BX640546.13| Zebrafish DNA sequence from clone CH211-152L3 in linkage group 5, complete sequence Length = 101103 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 26583 ttaattaattaattattcaa 26564
>ref|NM_004022.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant D140ab, mRNA Length = 7339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6557 atgttaattaattaattatt 6538
>ref|NM_004021.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140b, mRNA Length = 7378 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6596 atgttaattaattaattatt 6577
>ref|NM_004014.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp116, mRNA Length = 5623 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 4841 atgttaattaattaattatt 4822
>ref|NM_004023.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140bc, mRNA Length = 7048 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6266 atgttaattaattaattatt 6247
>ref|NM_004011.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp260-1, mRNA Length = 9773 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 8991 atgttaattaattaattatt 8972
>ref|NM_004015.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71, mRNA Length = 4623 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3841 atgttaattaattaattatt 3822
>ref|NM_004013.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140, mRNA Length = 7410 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6628 atgttaattaattaattatt 6609
>ref|NM_004006.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427m, mRNA Length = 13993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 13211 atgttaattaattaattatt 13192
>ref|NM_004012.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp260-2, mRNA Length = 9916 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 9134 atgttaattaattaattatt 9115
>ref|NM_004007.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427l, mRNA Length = 13764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 12982 atgttaattaattaattatt 12963
>ref|NM_004009.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427p1, mRNA Length = 14000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 13218 atgttaattaattaattatt 13199
>ref|NM_004010.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427p2, mRNA Length = 14082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 13300 atgttaattaattaattatt 13281
>ref|NM_000109.2| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427c, mRNA Length = 14069 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 13287 atgttaattaattaattatt 13268
>ref|NM_004020.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp140c, mRNA Length = 7050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6268 atgttaattaattaattatt 6249
>ref|NM_004016.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71b, mRNA Length = 4591 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3809 atgttaattaattaattatt 3790
>ref|NM_004017.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71a, mRNA Length = 4584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3802 atgttaattaattaattatt 3783
>ref|NM_004018.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71ab, mRNA Length = 4552 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3770 atgttaattaattaattatt 3751
>emb|AL390242.17| Human DNA sequence from clone RP11-31F15 on chromosome 1p13.1-13.3 Contains the 3' end of a novel gene, the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 68883 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 56554 atgttaattaattaattatt 56535
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 45438 ttaattaattaattattcaa 45457
>gb|BC094758.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71b, mRNA (cDNA clone IMAGE:30336570), complete cds Length = 4621 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3823 atgttaattaattaattatt 3804
>gb|BC028720.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71b, mRNA (cDNA clone IMAGE:4822807), complete cds Length = 4658 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3860 atgttaattaattaattatt 3841
>gb|BC070078.1| Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types), transcript variant Dp71a, mRNA (cDNA clone IMAGE:5262850), complete cds Length = 4598 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 3801 atgttaattaattaattatt 3782
>emb|AL935165.5| Zebrafish DNA sequence from clone CH211-198D18 in linkage group 4 Contains the cugbp2 gene for CUG triplet repeat, RNA binding protein 2, the 5' end of a novel gene and a CpG island, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 70232 ttaattaattaattattcaa 70251
>emb|BX248106.7| Zebrafish DNA sequence from clone CH211-123P13 in linkage group 17, complete sequence Length = 140228 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 42520 ttaattaattaattattcaa 42501
>emb|CR394567.7| Zebrafish DNA sequence from clone DKEY-88M1 in linkage group 9, complete sequence Length = 60177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 40330 ttaattaattaattattcaa 40349
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaacatc 110 ||||||||||||||||||| |||| Sbjct: 49679 ttaattaattaattattcatcatc 49702
>gb|DQ397636.1| Cenarchaeum symbiosum clone C07D10, complete sequence Length = 36261 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ttgggcgggtgcttgccgca 375 |||||||||||||||||||| Sbjct: 27616 ttgggcgggtgcttgccgca 27597
>gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequence Length = 45713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ttgggcgggtgcttgccgca 375 |||||||||||||||||||| Sbjct: 24144 ttgggcgggtgcttgccgca 24125
>emb|BX511270.9| Zebrafish DNA sequence from clone DKEY-35N12 in linkage group 14, complete sequence Length = 246102 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 169799 ttaattaattaattattcaa 169818
>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13, complete sequence Length = 193538 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 agcacatgttaattaattaattattcaa 106 ||||||| ||||||||||||||| |||| Sbjct: 79117 agcacattttaattaattaattaatcaa 79144
>tpg|BK005032.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 29 (WRKY29) gene, complete cds Length = 3368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cacatgttaattaattaatt 100 |||||||||||||||||||| Sbjct: 2901 cacatgttaattaattaatt 2882
>gb|AC006061.1| Homo sapiens X BAC GSHB-19O24 (Genome Systems Human BAC Library) complete sequence Length = 98056 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 91783 atgttaattaattaattatt 91802
>gb|AC025800.10| Homo sapiens chromosome 8, clone RP11-600N23, complete sequence Length = 185359 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atcacaattgaaaattataa 25 |||||||||||||||||||| Sbjct: 72609 atcacaattgaaaattataa 72628
>gb|AF331456.1|AF331456 Heterodera glycines chemosensory receptor gene, complete sequence Length = 7127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 2040 ttaattaattaattattcaa 2021
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ggcactggaagccgttgggcgggt 365 |||||||||| ||||||||||||| Sbjct: 1223748 ggcactggaatccgttgggcgggt 1223771
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15, complete sequence Length = 205794 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 123459 ttaattaattaattattcaa 123440
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 acatgttaattaattaattattcaacat 109 |||||| |||||||||||| |||||||| Sbjct: 35917 acatgtaaattaattaatttttcaacat 35944
>gb|AC102189.13| Mus musculus chromosome 8, clone RP24-216J7, complete sequence Length = 136839 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 7480 atgttaattaattaattatt 7499
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 22247461 caggctaggctaggctaggc 22247480
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 7803121 acatgttaattaattaatta 7803140
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cacatgttaattaattaatt 100 |||||||||||||||||||| Sbjct: 630286 cacatgttaattaattaatt 630305
>emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 in linkage group 1, complete sequence Length = 169067 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gttaattaattaattattca 105 |||||||||||||||||||| Sbjct: 100615 gttaattaattaattattca 100634
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaacatc 110 ||||||||||||||||||| |||| Sbjct: 49679 ttaattaattaattattcatcatc 49702
>gb|AC084653.1|CBRG45O14 Caenorhabditis briggsae cosmid G45O14, complete sequence Length = 43983 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 acatgttaattaattaattattca 105 |||| ||||||||||||||||||| Sbjct: 43689 acattttaattaattaattattca 43666
>gb|M18533.1|HUMDYS Homo sapiens dystrophin (DMD) mRNA, complete cds Length = 13957 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 13175 atgttaattaattaattatt 13156
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cacatgttaattaattaatt 100 |||||||||||||||||||| Sbjct: 64788 cacatgttaattaattaatt 64807
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 46405 acatgttaattaattaatta 46424
>dbj|AK129855.1| Homo sapiens cDNA FLJ26345 fis, clone HRT03668 Length = 2563 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 1781 atgttaattaattaattatt 1762
>gb|AC156367.3| Bos taurus clone RP42-394P24, complete sequence Length = 78774 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcacaattgaaaattataaa 26 |||||||||||||||||||| Sbjct: 77867 tcacaattgaaaattataaa 77848
>gb|AC004998.2|AC004998 Homo sapiens PAC clone RP1-164D5 from Xq23, complete sequence Length = 135572 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 98091 acatgttaattaattaatta 98110
>dbj|AK073019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150A21, full insert sequence Length = 2797 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 508 caggctaggctaggctaggc 489
>gb|U70853.1| Caenorhabditis elegans cosmid M01H9, complete sequence Length = 30522 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 aggctaggctaggctaggcg 328 |||||||||||||||||||| Sbjct: 7054 aggctaggctaggctaggcg 7073
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence Length = 176649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 12773 atgttaattaattaattatt 12792
>emb|CR381594.6| Zebrafish DNA sequence from clone DKEY-12H3 in linkage group 19, complete sequence Length = 182645 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 30935 ttaattaattaattattcaa 30954
>emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 in linkage group 10, complete sequence Length = 176964 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gttaattaattaattattca 105 |||||||||||||||||||| Sbjct: 53125 gttaattaattaattattca 53106
>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete sequence Length = 254899 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 136512 caggctaggctaggctaggc 136531
>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence Length = 158922 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 aggctaggctaggctaggcg 328 |||||||||||||||||||| Sbjct: 93297 aggctaggctaggctaggcg 93316
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence Length = 215708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 aggctaggctaggctaggcg 328 |||||||||||||||||||| Sbjct: 12874 aggctaggctaggctaggcg 12855
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 242506 ttaattaattaattattcaa 242525
>emb|CT573090.2| RP43-052E01, complete sequence Length = 161118 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 88948 atgttaattaattaattatt 88929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 acatgttaattaattaatta 101 |||||||||||||||||||| Sbjct: 7873208 acatgttaattaattaatta 7873227
>emb|AL928864.11| Zebrafish DNA sequence from clone CH211-10P21, complete sequence Length = 181508 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 58905 ttaattaattaattattcaa 58924
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 117322 caggctaggctaggctaggc 117341
>gb|AC005298.1|AC005298 Drosophila melanogaster DNA sequence (P1s DS04841 (D188) and DS08189 (D218)), complete sequence Length = 95272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caggctaggctaggctaggc 327 |||||||||||||||||||| Sbjct: 35614 caggctaggctaggctaggc 35633
>emb|AL928672.14| Zebrafish DNA sequence from clone CH211-136O4, complete sequence Length = 187939 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 137803 ttaattaattaattattcaa 137784
>gb|AF052733.1|AF052733 Heterodera glycines beta-1,4-endoglucanase-1 precursor (HG-eng-1) gene, complete cds Length = 5368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 456 ttaattaattaattattcaa 475
>emb|CT025570.7| Mouse DNA sequence from clone RP24-82O4 on chromosome 14, complete sequence Length = 232110 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 227715 atgttaattaattaattatt 227696
>emb|AL807832.6| Mouse DNA sequence from clone RP23-198D21 on chromosome 2, complete sequence Length = 192480 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 78908 ttaattaattaattattcaa 78927
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ttaattaattaattattcaa 106 |||||||||||||||||||| Sbjct: 161665 ttaattaattaattattcaa 161646
>dbj|AB208836.1| Homo sapiens mRNA for dystrophin Dp427c isoform variant protein Length = 6801 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atgttaattaattaattatt 103 |||||||||||||||||||| Sbjct: 6012 atgttaattaattaattatt 5993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,371,279 Number of Sequences: 3902068 Number of extensions: 3371279 Number of successful extensions: 151818 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150628 Number of HSP's gapped (non-prelim): 1140 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
