ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast01d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184115.2| Oryza sativa (japonica cultivar-group), mRNA 121 2e-24
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
3dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AK099387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5dbj|AK059097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
6gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence 103 4e-19
7gb|AY106811.1| Zea mays PCO109530 mRNA sequence 103 4e-19
8gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 70 5e-09
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
10dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
11dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 5e-09
13dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 70 5e-09
14dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
15gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 54 3e-04
16gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 44 0.29
17gb|AY103557.1| Zea mays PCO070710 mRNA sequence 44 0.29
18gb|AC008040.7| Homo sapiens 3 BAC RP11-379K17 (Roswell Park Canc... 42 1.2
19gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Can... 42 1.2
20emb|Z49913.1|CEZK938 Caenorhabditis elegans Cosmid ZK938, comple... 42 1.2
21emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 42 1.2
22emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 42 1.2
23gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 4.6
24ref|XM_500907.1| Yarrowia lipolytica CLIB122, YALI0B14949g predi... 40 4.6
25gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 4.6
26gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.6
27emb|AL121866.13|HSA191C22 Human DNA sequence from clone RP11-191... 40 4.6
28emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in ... 40 4.6
29gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like ... 40 4.6
30gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence 40 4.6
31gb|AC022089.7| Homo sapiens chromosome 5 clone CTB-125N5, comple... 40 4.6
32gb|AC010428.7| Homo sapiens chromosome 5 clone CTD-2199C13, comp... 40 4.6
33gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.6
34gb|AC011403.4|AC011403 Homo sapiens chromosome 5 clone CTB-3P13,... 40 4.6
35gb|AC106886.3| Homo sapiens chromosome 16 clone RP11-2C24, compl... 40 4.6
36gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, comple... 40 4.6
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.6
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.6
39dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 4.6
40dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.6
41dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.6
42emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, co... 40 4.6
43emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 4.6
44gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipie... 40 4.6 
>ref|NM_184115.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1421

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  catcagtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcg 289
            |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1234 catcagtaagtgtagcccttctggaacattcccttcttggcctcatcgctctcgccctcg 1175

                                                                 
Query: 290  ccggtgtagctgccaagctgccccaacgagttggccttggcgcggaccagcag 342
            ||||||||||  || |||||  ||| |||||| |||||||| |||||||||||
Sbjct: 1174 ccggtgtagcgaccgagctgagccagcgagttcgccttggcacggaccagcag 1122
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                           
Query: 230     catcagtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcg 289
               |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1018248 catcagtaagtgtagcccttctggaacattcccttcttggcctcatcgctctcgccctcg 1018189

                                                                    
Query: 290     ccggtgtagctgccaagctgccccaacgagttggccttggcgcggaccagcag 342
               ||||||||||  || |||||  ||| |||||| |||||||| |||||||||||
Sbjct: 1018188 ccggtgtagcgaccgagctgagccagcgagttcgccttggcacggaccagcag 1018136
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>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0494A10
          Length = 145576

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 230   catcagtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcg 289
             |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 55916 catcagtaagtgtagcccttctggaacattcccttcttggcctcatcgctctcgccctcg 55857

                                                                  
Query: 290   ccggtgtagctgccaagctgccccaacgagttggccttggcgcggaccagcag 342
             ||||||||||  || |||||  ||| |||||| |||||||| |||||||||||
Sbjct: 55856 ccggtgtagcgaccgagctgagccagcgagttcgccttggcacggaccagcag 55804
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>dbj|AK099387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075H15, full
            insert sequence
          Length = 1477

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  catcagtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcg 289
            |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1233 catcagtaagtgtagcccttctggaacattcccttcttggcctcatcgctctcgccctcg 1174

                                                                 
Query: 290  ccggtgtagctgccaagctgccccaacgagttggccttggcgcggaccagcag 342
            ||||||||||  || |||||  ||| |||||| |||||||| |||||||||||
Sbjct: 1173 ccggtgtagcgaccgagctgagccagcgagttcgccttggcacggaccagcag 1121
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>dbj|AK059097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C06, full
            insert sequence
          Length = 1421

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 230  catcagtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcg 289
            |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1234 catcagtaagtgtagcccttctggaacattcccttcttggcctcatcgctctcgccctcg 1175

                                                                 
Query: 290  ccggtgtagctgccaagctgccccaacgagttggccttggcgcggaccagcag 342
            ||||||||||  || |||||  ||| |||||| |||||||| |||||||||||
Sbjct: 1174 ccggtgtagcgaccgagctgagccagcgagttcgccttggcacggaccagcag 1122
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>gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence
          Length = 859

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                       
Query: 234 agtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcgccgg 293
           |||||||||| ||||||||||||||||| || || |||||||||||||| ||||| || |
Sbjct: 737 agtaggtgtagcccttctggaacatgcctttcttcgcctcgtcgctctcaccctcaccag 678

                                                               
Query: 294 tgtagctgccaagctgccccaacgagttggccttggcgcggaccagcagggc 345
           ||||||  || |||||  ||| |||||||||||| ||||| |||||||||||
Sbjct: 677 tgtagcgacctagctgtgccagcgagttggcctttgcgcgcaccagcagggc 626
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>gb|AY106811.1| Zea mays PCO109530 mRNA sequence
          Length = 1545

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 234  agtaggtgtaacccttctggaacatgccctttttggcctcgtcgctctcgccctcgccgg 293
            |||||||||| ||||||||||||||||| || ||||| || |||||||||||||| || |
Sbjct: 1242 agtaggtgtagcccttctggaacatgcctttcttggcatcatcgctctcgccctcaccag 1183

                                                                
Query: 294  tgtagctgccaagctgccccaacgagttggccttggcgcggaccagcagggc 345
            ||||||  || |||||  ||| |||||||||||| ||||| |||||||||||
Sbjct: 1182 tgtagcgaccgagctgggccagcgagttggcctttgcgcgcaccagcagggc 1131
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                         
Query: 253   gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
             |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 63374 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 63433

                                    
Query: 313   caacgagttggccttggcgcgga 335
             || ||||||||||||||||||||
Sbjct: 63434 cagcgagttggccttggcgcgga 63456
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                           
Query: 253     gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
               |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 3469419 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 3469478

                                      
Query: 313     caacgagttggccttggcgcgga 335
               || ||||||||||||||||||||
Sbjct: 3469479 cagcgagttggccttggcgcgga 3469501
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
            |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 1240 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 1181

                                   
Query: 313  caacgagttggccttggcgcgga 335
            || ||||||||||||||||||||
Sbjct: 1180 cagcgagttggccttggcgcgga 1158
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
            |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 1236 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 1177

                                   
Query: 313  caacgagttggccttggcgcgga 335
            || ||||||||||||||||||||
Sbjct: 1176 cagcgagttggccttggcgcgga 1154
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                           
Query: 253     gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
               |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 3478123 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 3478182

                                      
Query: 313     caacgagttggccttggcgcgga 335
               || ||||||||||||||||||||
Sbjct: 3478183 cagcgagttggccttggcgcgga 3478205
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
            |||||||||||  ||||||||| ||  |||||| |||| ||||||  |||| |||||| |
Sbjct: 2768 gaacatgccctccttggcctcggcggcctcgccgtcgctggtgtacttgccgagctgcgc 2709

                                   
Query: 313  caacgagttggccttggcgcgga 335
            || ||||||||||||||||||||
Sbjct: 2708 cagcgagttggccttggcgcgga 2686
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 280  ctcgccctcgccggtgtagctgccaagctgccccaacgagttggccttggcgcgga 335
            |||||| |||| ||||||  |||| |||||| ||| ||||||||||||||||||||
Sbjct: 1204 ctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcgga 1149
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 281  tcgccctcgccggtgtagctgccaagctgccccaacgagttggccttggcgcgga 335
            ||||| |||| ||||||  |||| |||||| ||| ||||||||||||||||||||
Sbjct: 1104 tcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcgga 1050
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>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 280  ctcgccctcgccggtgtagctgccaagctgccccaacgagttggccttggcgcg 333
            |||||| |||| ||||||  |||| |||||| |||  |||||||||||||||||
Sbjct: 1217 ctcgccgtcgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 1164
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 253  gaacatgccctttttggcctcgtcgctctcgccctcgccggtgtagctgccaagctgccc 312
            |||||| ||||  ||||||||| ||  |||||| |||  ||||||  |||| |||||| |
Sbjct: 1385 gaacattccctccttggcctcggcggcctcgccgtcggaggtgtacttgccgagctgcgc 1326

                                          
Query: 313  caacgagttggccttggcgcggaccagcag 342
            ||  ||||||||||||||||| | ||||||
Sbjct: 1325 cagggagttggccttggcgcgcagcagcag 1296
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>gb|AC008040.7| Homo sapiens 3 BAC RP11-379K17 (Roswell Park Cancer Institue Human BAC
              Library) complete sequence
          Length = 204917

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 104    atacagctaacagtccttggcaccaacac 132
              |||||||||||| |||||| |||||||||
Sbjct: 203379 atacagctaacattccttgtcaccaacac 203407
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>gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 125445

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 104 atacagctaacagtccttggcaccaacac 132
           |||||||||||| |||||| |||||||||
Sbjct: 461 atacagctaacattccttgtcaccaacac 489
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>emb|Z49913.1|CEZK938 Caenorhabditis elegans Cosmid ZK938, complete sequence
          Length = 21971

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 52   gtttgttctcataaatataacttca 76
            ||||||| |||||||||||||||||
Sbjct: 8664 gtttgttttcataaatataacttca 8640
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>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 66     atataacttcaggcaactctagagt 90
              |||||||||||| ||||||||||||
Sbjct: 143553 atataacttcagtcaactctagagt 143529
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>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 66    atataacttcaggcaactctagagt 90
             |||||||||||| ||||||||||||
Sbjct: 46331 atataacttcagtcaactctagagt 46307
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 269     gcctcgtcgctctcgccctcgccg 292
               ||||||||| ||||||||||||||
Sbjct: 2565658 gcctcgtcgatctcgccctcgccg 2565681
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>ref|XM_500907.1| Yarrowia lipolytica CLIB122, YALI0B14949g predicted mRNA
          Length = 4830

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttttggcctcgtcgctct 281
           ||||||||||||||||||||
Sbjct: 369 ctttttggcctcgtcgctct 350
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 321     tggccttggcgcggaccagc 340
               ||||||||||||||||||||
Sbjct: 2976405 tggccttggcgcggaccagc 2976386
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 269     gcctcgtcgctctcgccctcgccg 292
               |||||||||| |||||||||||||
Sbjct: 2790691 gcctcgtcgcgctcgccctcgccg 2790668
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>emb|AL121866.13|HSA191C22 Human DNA sequence from clone RP11-191C22 on chromosome Xq22.1-23,
             complete sequence
          Length = 37545

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 29    ctcagggtatgcatacagtaattgtttgttct 60
             |||| ||||||||| ||||||||||| |||||
Sbjct: 11794 ctcatggtatgcattcagtaattgttagttct 11763
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>emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in linkage group 24,
              complete sequence
          Length = 161081

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ttgtttgttctcataaatat 69
              ||||||||||||||||||||
Sbjct: 118593 ttgtttgttctcataaatat 118574
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>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA,
            complete cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  gagttggccttggcgcggac 336
            ||||||||||||||||||||
Sbjct: 1236 gagttggccttggcgcggac 1217
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>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence
          Length = 179113

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    acatgccctttttggcctcg 274
              ||||||||||||||||||||
Sbjct: 104587 acatgccctttttggcctcg 104568
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>gb|AC022089.7| Homo sapiens chromosome 5 clone CTB-125N5, complete sequence
          Length = 44504

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   aattgtttgttctcataaat 67
            ||||||||||||||||||||
Sbjct: 1543 aattgtttgttctcataaat 1524
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>gb|AC010428.7| Homo sapiens chromosome 5 clone CTD-2199C13, complete sequence
          Length = 134420

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aattgtttgttctcataaat 67
             ||||||||||||||||||||
Sbjct: 59480 aattgtttgttctcataaat 59499
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 269     gcctcgtcgctctcgccctcgccg 292
               |||||||||| |||||||||||||
Sbjct: 3376909 gcctcgtcgcgctcgccctcgccg 3376932
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>gb|AC011403.4|AC011403 Homo sapiens chromosome 5 clone CTB-3P13, complete sequence
          Length = 124552

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aattgtttgttctcataaat 67
             ||||||||||||||||||||
Sbjct: 20201 aattgtttgttctcataaat 20182
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>gb|AC106886.3| Homo sapiens chromosome 16 clone RP11-2C24, complete sequence
          Length = 207950

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    taaatataacttcaggcaactcta 86
             ||||||||| ||||||||||||||
Sbjct: 86736 taaatataatttcaggcaactcta 86759
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>gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, complete sequence
          Length = 188829

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   acatgccctttttggcctcg 274
             ||||||||||||||||||||
Sbjct: 33415 acatgccctttttggcctcg 33396
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     ttggccttggcgcggaccag 339
               ||||||||||||||||||||
Sbjct: 1486250 ttggccttggcgcggaccag 1486269
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 269     gcctcgtcgctctcgccctcgccg 292
               |||||||||| |||||||||||||
Sbjct: 4825536 gcctcgtcgcgctcgccctcgccg 4825513
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     ccttctggaacatgcccttt 265
               ||||||||||||||||||||
Sbjct: 2201080 ccttctggaacatgcccttt 2201099
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 269    gcctcgtcgctctcgccctcgccg 292
              |||||||||| |||||||||||||
Sbjct: 750810 gcctcgtcgcgctcgccctcgccg 750833
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 272     tcgtcgctctcgccctcgccggtg 295
               ||||||| ||||||||||||||||
Sbjct: 5893293 tcgtcgccctcgccctcgccggtg 5893316
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>emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, complete sequence
          Length = 58683

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    tttgttctcataaatataacttca 76
             |||||| |||||||||||||||||
Sbjct: 25761 tttgttttcataaatataacttca 25738
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 262     ctttttggcctcgtcgctct 281
               ||||||||||||||||||||
Sbjct: 1983192 ctttttggcctcgtcgctct 1983173
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>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940144D9, complete sequence
          Length = 114276

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ctcgtcgctctcgccctcgc 290
             ||||||||||||||||||||
Sbjct: 31691 ctcgtcgctctcgccctcgc 31710


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,114,815
Number of Sequences: 3902068
Number of extensions: 3114815
Number of successful extensions: 54816
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54389
Number of HSP's gapped (non-prelim): 427
length of query: 345
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 323
effective length of database: 17,147,199,772
effective search space: 5538545526356
effective search space used: 5538545526356
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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