>FLBA_EMENI (P38093) Developmental regulator flbA|
          Length = 719

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +3

Query: 111 HTTTEYKHDHTVPTASSIQSLA*LRFHPLQNVAKATDPFFILATCTTNFSSCPH--ARDI 284
           H     K+DHT  +  +I +L  L+F     +    DP  I+ T TT   S     AR +
Sbjct: 249 HRVRFTKYDHTFTSEEAINNLGSLKFSQSNRMPDPKDPSRIVTTTTTTTFSMAKEMARSV 308

Query: 285 C 287
           C
Sbjct: 309 C 309

>DPYD_PIG (Q28943) Dihydropyrimidine dehydrogenase [NADP+] precursor (EC|
           1.3.1.2) (DPD) (DHPDHase) (Dihydrouracil dehydrogenase)
           (Dihydrothymine dehydrogenase)
          Length = 1025

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 313 SCQCGLRTAQMSLACGQDEKLVVHVAKMKKGSVAFATF 200
           SC  G+    M LACGQD +LV ++ +  + +V    F
Sbjct: 670 SCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFF 707

>DPYD_HUMAN (Q12882) Dihydropyrimidine dehydrogenase [NADP+] precursor (EC|
           1.3.1.2) (DPD) (DHPDHase) (Dihydrouracil dehydrogenase)
           (Dihydrothymine dehydrogenase)
          Length = 1025

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 313 SCQCGLRTAQMSLACGQDEKLVVHVAKMKKGSVAFATF 200
           SC  G+    M LACGQD +LV ++ +  + +V    F
Sbjct: 670 SCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFF 707

>DPYD_BOVIN (Q28007) Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) (DPD)|
           (DHPDHase) (Dihydrouracil dehydrogenase) (Dihydrothymine
           dehydrogenase)
          Length = 1025

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 313 SCQCGLRTAQMSLACGQDEKLVVHVAKMKKGSVAFATF 200
           SC  G+    M LACGQD +LV ++ +  + +V    F
Sbjct: 670 SCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIPFF 707

>GPR78_HUMAN (Q96P69) Probable G-protein coupled receptor 78|
          Length = 363

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 400 LLLTMRMGQAVGISGASMSCSWQLVVIDGSCQCGLR 293
           LLL    GQ++  SGA++ CSW L        C LR
Sbjct: 125 LLLGCAWGQSLAFSGAALGCSW-LGYSSAFASCSLR 159

>RCEM_RHOCA (P11847) Reaction center protein M chain (Photosynthetic reaction|
           center M subunit)
          Length = 306

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 217 PILFSSWPHAPPIFHLAHMQGTFVLSADH 303
           PIL  SW  APP    +H+  T   S DH
Sbjct: 163 PILMGSWSVAPPYGIFSHLDWTNQFSLDH 191

>SYFA_METKA (Q8TYM5) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 524

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -1

Query: 95  DWVHVGGWSL-----INPLGHMPDVMCL 27
           DWV +GG  +     + PLG  PDV+CL
Sbjct: 457 DWVELGGAGIFRPEVLQPLGFDPDVVCL 484

>AMT1_CAEEL (P54145) Putative ammonium transporter 1|
          Length = 534

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 339 HGSWWLLMVLVNVVCGQHKCPLHVGKMKNWWCMW 238
           HG W LL+ +   + G         KM+ W C+W
Sbjct: 288 HGKWTLLLTINACLSGMVAACAGCNKMEPWACIW 321

>NUDH_HAEDU (Q7VPB7) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 197

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 228 KKDRWLLLRSVADETVVMLKT 166
           +K RW LL+ V+DE+ V LKT
Sbjct: 96  QKQRWFLLQLVSDESAVNLKT 116

>MAD58_ORYSA (Q2V0P1) MADS-box transcription factor 58 (OsMADS58)|
          Length = 272

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 17  EYSTSTLHQAYDPRGLLNSSLQHAPNHYIE 106
           EY  + +H  YDPR  L  ++ H P +Y E
Sbjct: 233 EYVQNMIH--YDPRNFLQFNIMHQPQYYPE 260

>LIMK1_CHICK (Q8QFP8) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (chLIMK1)|
          Length = 662

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 218 RSFFHLGHMHHQFFILPTCKGHLC-CPQTTLTRTINNHQLP*TAHRGSRDPHCLPHPHCQ 394
           RS  + GH ++Q  + P  +  L   P + +  T+    +P     G R       PHC 
Sbjct: 130 RSKLYCGHCYYQMVVTPVIEQILPDSPGSRIPHTVTLVSIP-ACSDGKRGFSVSIDPHCG 188

Query: 395 KQGC 406
            QGC
Sbjct: 189 AQGC 192

>XYLT_DROPS (Q5QQ53) Xylosyltransferase oxt (EC 2.4.2.26) (Peptide|
           O-xylosyltransferase)
          Length = 880

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -2

Query: 355 ASMSCSWQL-----VVIDGSCQCGLRTAQMSLACGQDEK 254
           A ++CS Q      + +  SC  G  TA +SL C +DEK
Sbjct: 111 AQIACSIQAGRFYAIQLKSSCPSGNHTANVSLGCYRDEK 149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,032,367
Number of Sequences: 219361
Number of extensions: 1348659
Number of successful extensions: 3285
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3277
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)