>ODB2_PSEPU (P09062) Lipoamide acyltransferase component of branched-chain|
           alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
           (Dihydrolipoyllysine-residue
           (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide
           branched chain transacylase)
          Length = 423

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 286 KKAELPSLPIASDPDSHSSVKP*ALDLLASY 378
           K AE+P+ P+A+ P+    VKP A    AS+
Sbjct: 92  KPAEVPAAPVAAKPEPQKDVKPAAYQASASH 122

>HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain binding protein-related) (RAB-R)
          Length = 479

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +1

Query: 238 PLLHQPKLRLETCSSEKKAELPSLPIASDPDSHSSVKP*ALDLLASYG 381
           P L  P        S+ +A   S   +S P SHSS K  + DLLA  G
Sbjct: 185 PSLSDPASTSSQPGSQSQARSSSQARSSQPPSHSSTKKASTDLLADIG 232

>ICEN_PSESY (P06620) Ice nucleation protein|
          Length = 1200

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 459 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGAD 507



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 363 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGSD 411

>ATG2_DEBHA (Q6BTX0) Autophagy-related protein 2|
          Length = 1903

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -3

Query: 377  YDASRSSAY----GFTEEWLSGSDAIGNDGSSAFFSEEHVSN 264
            YD S +S+     GF +  +S SD   +D SS  F EEH S+
Sbjct: 1161 YDGSHTSSQSLENGFNKLSISESDNAKDDASSFSFDEEHFSS 1202

>ICEV_PSESX (O33479) Ice nucleation protein|
          Length = 1196

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 455 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGAD 503



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 407 DSSLIAGYGSTQT--SGSDSSLTAGYGSTQTAQEGSNLTAGYGSTGTAGVD 455



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 359 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGSD 407

>ICEK_PSESX (O30611) Ice nucleation protein|
          Length = 1148

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 407 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGAD 455



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 359 DSSLIAGYGSTQT--SGSDSSLTAGYGSTQTAQEGSNLTAGYGSTGTAGVD 407



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 374 DASRSSAYGFTEEWLSGSDAIGNDGSSAFFSEEHVSNLNFGWCSSGAEGFD 222
           D+S  + YG T+   SGSD+    G  +  + +  SNL  G+ S+G  G D
Sbjct: 311 DSSLIAGYGSTQT--SGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTAGSD 359

>MSH2_MAIZE (Q9XGC9) DNA mismatch repair protein MSH2 (MUS1)|
          Length = 942

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 277 SSEKKAELPSLPIASDPDS--HSSVKP*ALDLLASYGYALGHLGS 405
           + +KKA+  S  +A D       SV+P   DLL+ + YALG LG+
Sbjct: 225 TEKKKADFKSRDLAQDLGRIIRGSVEP-VRDLLSQFDYALGPLGA 268


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,611,555
Number of Sequences: 219361
Number of extensions: 838562
Number of successful extensions: 2426
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)