| Clone Name | rbaet94c03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 Score = 860 bits (434), Expect = 0.0 Identities = 440/442 (99%) Strand = Plus / Minus Query: 1 agacatgtgaaaactatggcatcatcatatcatataaccaaaagaaattttacgtccctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1783 agacatgtgaaaactatggcatcatcatatcatataaccaaaagaaattttacgtccctg 1724 Query: 61 gcactcccaggaagaacggaagtgtcaatggaccgcacggaggggattacagttattatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 gcactcccaggaagaacggaagtgtcaatggaccgcacggaggggattacagttattatg 1664 Query: 121 taacagggctcccgcaggacaacaccccagcagaatgcacacgaaaaattacaggacggt 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 taacggggctcccgcaggacaacaccccagcagaatgcacacgaaaaattacaggacggt 1604 Query: 181 taacccagcaaaggaggaccggaaggtttctggggatgcgagaaggtgggcgggcaggcg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1603 taactcagcaaaggaggaccggaaggtttctggggatgcgagaaggtgggcgggcaggcg 1544 Query: 241 ggtgaacgtcactcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctcc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1543 ggtgaacgtcactcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctcc 1484 Query: 301 gtctgggatctccaacttgactccagccttggcggcgatggtcacgttgcccttgagtac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gtctgggatctccaacttgactccagccttggcggcgatggtcacgttgcccttgagtac 1424 Query: 361 gactccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 gactccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgct 1364 Query: 421 ggggatcgacttgaaacgggca 442 |||||||||||||||||||||| Sbjct: 1363 ggggatcgacttgaaacgggca 1342
>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA sequence Length = 1814 Score = 299 bits (151), Expect = 4e-78 Identities = 181/191 (94%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1527 ctcaaagatcctccgggccgttgatgtccttgttctccagcacagctccgtctgggatct 1468 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| Sbjct: 1467 ccaacttgactccagccttggctgcgatggtcacgttgccctcgagcacgactccagagc 1408 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || Sbjct: 1407 caaacgagacatcaccagagaccttcaagctgtcgagctcaacgatgctggggatcgtct 1348 Query: 432 tgaaacgggca 442 ||||||||||| Sbjct: 1347 tgaaacgggca 1337 Score = 214 bits (108), Expect = 2e-52 Identities = 172/191 (90%), Gaps = 3/191 (1%) Strand = Plus / Minus Query: 29 atcatataaccaaaagaaattttacgtccctggcactcccaggaagaacggaagtgtcaa 88 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | Sbjct: 1739 atcatataaccaaaagaaattttacgtccctggcacgcccaggaagaac--aagtgtaga 1682 Query: 89 tggaccgcacggaggggattacagttattatgtaacagggctcccgcaggacaacacccc 148 || || |||| |||||||||||| ||||||||||| ||||| | |||||||||||||| Sbjct: 1681 tgaacagcacagaggggattacaattattatgtaagggggctatcccaggacaacacccc 1622 Query: 149 agcagaatgcacacgaaaaattacaggacggttaacccagcaaaggaggaccggaaggtt 208 ||||||||||||||| |||||||||||||||||||| || | |||||||||||||||||| Sbjct: 1621 agcagaatgcacacg-aaaattacaggacggttaactcaacgaaggaggaccggaaggtt 1563 Query: 209 tctggggatgc 219 |||||| |||| Sbjct: 1562 tctgggaatgc 1552
>dbj|AK119232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E10, full insert sequence Length = 1696 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1498 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1439 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1438 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1382 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1381 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1322 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1321 taaaccgggc 1312
>dbj|AK119197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C12, full insert sequence Length = 1727 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1499 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1440 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1439 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1383 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1382 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1323 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1322 taaaccgggc 1313
>dbj|AK104344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B12, full insert sequence Length = 1695 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1497 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1438 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1437 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1381 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1380 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1321 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1320 taaaccgggc 1311
>dbj|AK103930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E03, full insert sequence Length = 1694 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1491 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1432 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1431 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1375 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1374 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1315 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1314 taaaccgggc 1305
>dbj|AK065780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M01, full insert sequence Length = 1750 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1498 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1439 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1438 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1382 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1381 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1322 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1321 taaaccgggc 1312
>dbj|AB062606.1| Oryza sativa (japonica cultivar-group) UGP mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1700 Score = 182 bits (92), Expect = 6e-43 Identities = 166/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||||| |||||| || |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1478 ctcaaagatcctccggaccgttgatgtccttgttctcaagcacggctccatctgggatct 1419 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| || | |||||||| ||||||||| || ||||||||| |||||||||| Sbjct: 1418 ccaacttccct---gacttggcggtgatggtcaccttacccttgagtgtaactccagagc 1362 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 1361 cgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctggggattgact 1302 Query: 432 tgaaacgggc 441 | || ||||| Sbjct: 1301 taaaccgggc 1292
>gb|AY178448.1| Bambusa oldhamii UDP-glucose pyrophosphorylase (UGP) mRNA, complete cds Length = 1731 Score = 167 bits (84), Expect = 4e-38 Identities = 147/168 (87%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||| || || ||||||||||||||||||||||| | ||| ||||| ||||||| ||| Sbjct: 1518 atcctccggaccattgatgtccttgttctcaagcacagttccatctggaatctccagctt 1459 Query: 319 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 378 ||||||| |||||| | ||||||||| |||||||||||| | |||||||||||| | Sbjct: 1458 cactccagacttggcagagatggtcaccttgcccttgagtgtaatgccagagccaaacca 1399 Query: 379 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggat 426 |||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1398 gacatcaccagagaccttcatgctgtcaagctcgacaatgctggggat 1351
>gb|BT016795.1| Zea mays clone Contig628 mRNA sequence Length = 1522 Score = 153 bits (77), Expect = 6e-34 Identities = 152/177 (85%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||| ||||| |||| |||||||| |||| || ||||| ||||| | ||||||||| Sbjct: 973 atcctcagggccattgacatccttgttttcaaatacagctccatctggaacctccaactt 914 Query: 319 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 378 ||||||| |||||||| ||| ||||| ||||||||||| | |||||| |||||| | Sbjct: 913 cactccagacttggcggtgattgtcaccttgcccttgagcgtaattccagaaccaaacca 854 Query: 379 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 853 gacatcaccagaaaccttcaagctgtcaagctcgacgatgctggggatggacttgaa 797
>gb|AY103595.1| Zea mays PCO108378 mRNA sequence Length = 1960 Score = 153 bits (77), Expect = 6e-34 Identities = 152/177 (85%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||| ||||| |||| |||||||| |||| || ||||| ||||| | ||||||||| Sbjct: 1559 atcctcagggccattgacatccttgttttcaaatacagctccatctggaacctccaactt 1500 Query: 319 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 378 ||||||| |||||||| ||| ||||| ||||||||||| | |||||| |||||| | Sbjct: 1499 cactccagacttggcggtgattgtcaccttgcccttgagcgtaattccagaaccaaacca 1440 Query: 379 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1439 gacatcaccagaaaccttcaagctgtcaagctcgacgatgctggggatggacttgaa 1383
>gb|BT016879.1| Zea mays clone Contig712 mRNA sequence Length = 1052 Score = 145 bits (73), Expect = 1e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 259 atcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||| ||||| |||| |||||||||||||| || |||| ||||| ||||||||||| Sbjct: 246 atcctcagggccattgacatccttgttctcaagtacgtctccatctggaatctccaactt 305 Query: 319 gactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacga 378 ||||||| ||||||| || ||||| |||||||||||| | ||| ||||||||| | Sbjct: 306 cactccaggcttggcgataattgtcaccttgcccttgagtgtaattccggagccaaacca 365 Query: 379 gacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 366 gacatcaccagaaaccttcaagctgtcaagctcaactatgctggggatggacttgaa 422
>gb|AF203909.1|AF203909 Musa acuminata UDP-glucose pyrophosphorylase (MWUGPA) mRNA, complete cds Length = 1722 Score = 109 bits (55), Expect = 8e-21 Identities = 154/187 (82%) Strand = Plus / Minus Query: 252 ctcaaatatcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatct 311 |||| ||||| || ||||| ||||| |||||||||| || || ||||| || | ||||| Sbjct: 1479 ctcagatatcttcggggccattgatcaccttgttctcgaggacggctccatcagagatct 1420 Query: 312 ccaacttgactccagccttggcggcgatggtcacgttgcccttgagtacgactccagagc 371 ||||||| ||||||| ||| || ||||| |||| |||||||| ||||| ||||| | Sbjct: 1419 ccaactttactccagactttgcagcgatactcacattgcccttcagtactactccttcac 1360 Query: 372 caaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgact 431 ||||| | ||||||||||| ||||| ||||| |||||||| |||||||| || ||||||| Sbjct: 1359 caaaccaaacatcaccagaaacctttaagctatcaagctcaacgatgctaggtatcgact 1300 Query: 432 tgaaacg 438 ||||||| Sbjct: 1299 tgaaacg 1293
>gb|BT018223.1| Zea mays clone EL01N0561D12.c mRNA sequence Length = 1307 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 364 tccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggg 423 ||||||||||||| ||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 653 tccagagccaaaccagacatcaccagaaaccttcaagctgtcaagctcaactatgctggg 594 Query: 424 gatcgacttgaa 435 ||| |||||||| Sbjct: 593 gatggacttgaa 582 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 279 ccttgttctcaagcaccgctccgtctgggatctccaacttgactccagccttggcg 334 ||||||||||||| || |||| ||||| ||||||||||| ||||||| ||||||| Sbjct: 1062 ccttgttctcaagtacgtctccatctggaatctccaacttcactccaggcttggcg 1007
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 362 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 421 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 76980 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 76921 Query: 422 gggatcgacttgaaacgggc 441 ||||| ||||| || ||||| Sbjct: 76920 gggattgacttaaaccgggc 76901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 279 ccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 77270 ccttgttctcaagcacggctccatctgggatctccaactt 77231
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 362 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 421 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 21620354 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 21620295 Query: 422 gggatcgacttgaaacgggc 441 ||||| ||||| || ||||| Sbjct: 21620294 gggattgacttaaaccgggc 21620275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 279 ccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 21620644 ccttgttctcaagcacggctccatctgggatctccaactt 21620605
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 362 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 421 ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 28678 actccagagccgaaccagacatcaccagagaccttcaaggtgtcaagctcgacaatgctg 28619 Query: 422 gggatcgacttgaaacgggc 441 ||||| ||||| || ||||| Sbjct: 28618 gggattgacttaaaccgggc 28599 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 279 ccttgttctcaagcaccgctccgtctgggatctccaactt 318 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 28968 ccttgttctcaagcacggctccatctgggatctccaactt 28929
>ref|XM_463887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1769 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 260 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 319 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1460 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1401 Query: 320 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 379 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1400 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1341 Query: 380 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| Sbjct: 1340 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaa 1285
>gb|AF249880.1|AF249880 Oryza sativa subsp. indica UDP-glucose pyrophosphorylase (UDPGase) mRNA, complete cds Length = 1746 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 260 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 319 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1447 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1388 Query: 320 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 379 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1387 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1328 Query: 380 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| Sbjct: 1327 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaa 1272
>dbj|AK071248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D10, full insert sequence Length = 1769 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 260 tcctctgggccgttgatgtccttgttctcaagcaccgctccgtctgggatctccaacttg 319 ||||| ||||| ||||| ||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 1460 tcctcggggccattgatatccttgttctcgatcactgctccatctgggatttccagtttg 1401 Query: 320 actccagccttggcggcgatggtcacgttgcccttgagtacgactccagagccaaacgag 379 || |||| | ||| | ||||||||| |||||||| | | || | |||||||||| | Sbjct: 1400 acaccaggttgggctgtgatggtcaccttgcccttcaatgtgatgctagagccaaaccaa 1341 Query: 380 acatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 |||||||| || ||||||||| |||||||||| || ||||||||||| |||||||| Sbjct: 1340 acatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggattgacttgaa 1285
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggat 426 |||||||||| | |||||||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 926943 agagccaaaccaaacatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggat 927002 Query: 427 cgacttgaa 435 |||||||| Sbjct: 927003 tgacttgaa 927011
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctggggat 426 |||||||||| | |||||||| || ||||||||| |||||||||| || ||||||||||| Sbjct: 136151 agagccaaaccaaacatcaccggaaaccttcaaggtgtcaagctcaacaatgctggggat 136210 Query: 427 cgacttgaa 435 |||||||| Sbjct: 136211 tgacttgaa 136219
>dbj|AB013353.1| Pyrus pyrifolia mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1699 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 378 agacatcaccagagaccttcaagctgtcaagctcgacgatgctggggatcgacttgaa 435 ||||||||||||| ||||| | ||| |||||||| | |||||||||||| |||||||| Sbjct: 1379 agacatcaccagaaaccttaaggctctcaagctcaaggatgctggggattgacttgaa 1322
>ref|NM_111195.2| Arabidopsis thaliana UGP; UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT3G03250 (UGP) mRNA, complete cds Length = 1837 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1441 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1394
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 30506 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 30459
>gb|AY059148.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1441 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1296 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1249
>gb|AY035071.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1382 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1335
>gb|AF361605.1| Arabidopsis thaliana AT3g03250/T17B22_6 mRNA, complete cds Length = 1739 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1367 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1320
>emb|BX825911.1|CNS0A4WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1359 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1312
>emb|BX823422.1|CNS0A4T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 367 agagccaaacgagacatcaccagagaccttcaagctgtcaagctcgac 414 |||||||||| ||||||||||||| ||||| | |||||| |||||||| Sbjct: 1306 agagccaaaccagacatcaccagacaccttaaggctgtcgagctcgac 1259
>ref|NM_180506.1| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.1 mRNA, complete cds Length = 1516 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1202 atcctctggaccgttgatgtccttattctcgagcac 1167 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1120 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1065
>ref|NM_121737.2| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.2 mRNA, complete cds Length = 1798 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1484 atcctctggaccgttgatgtccttattctcgagcac 1449 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1402 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1347
>gb|AY040042.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1413 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1407 atcctctggaccgttgatgtccttattctcgagcac 1372 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1325 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1270
>gb|AF360244.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1628 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1484 atcctctggaccgttgatgtccttattctcgagcac 1449 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1402 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1347
>gb|AF361816.1| Arabidopsis thaliana AT5g17310/MKP11_16 mRNA, complete cds Length = 1800 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1485 atcctctggaccgttgatgtccttattctcgagcac 1450 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1403 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1348
>emb|BX831255.1|CNS0A26Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1571 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcctctgggccgttgatgtccttgttctcaagcac 294 ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1464 atcctctggaccgttgatgtccttattctcgagcac 1429 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 1382 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 1327
>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11 Length = 75188 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 341 gtcacgttgcccttgagtacgactccagagccaaacgagacatcaccagagacctt 396 ||||| ||||||||||| || || || ||||||||| | |||||||| |||||||| Sbjct: 56123 gtcactttgcccttgagaacaacgccggagccaaaccaaacatcacctgagacctt 56178
>gb|AY082622.1| Solanum tuberosum BelRus UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || |||| ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcgatgatgctgggaatagacttgaaacgg 1248
>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 tggggatcgacttgaaacggg 440 ||||||||||||||||||||| Sbjct: 124647 tggggatcgacttgaaacggg 124627
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 tggggatcgacttgaaacggg 440 ||||||||||||||||||||| Sbjct: 281476 tggggatcgacttgaaacggg 281456
>dbj|AB055502.1| Nicotiana tabacum NtUGPase mRNA for UDP-glucose pyrophosphorylase, partial cds Length = 1128 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Minus Query: 362 actccagagccaaacgagacatcaccagagaccttcaagctgtcaagctcgacgatgctg 421 |||||||| |||||| | |||||||| | ||||| ||||| || || || | ||||||| Sbjct: 1043 actccagatccaaaccatacatcacccgtcacctttaagctatctagatcaatgatgctg 984 Query: 422 gggatcgacttgaaacg 438 || || ||||||||||| Sbjct: 983 ggaatagacttgaaacg 967
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggcgggcaggcgggtgaacg 248 |||||||||||||||||||| Sbjct: 3059650 ggcgggcaggcgggtgaacg 3059631
>gb|U20345.1|STU20345 Solanum tuberosum UDP-glucose pyrophosphorylase (UGPase) gene, UGPase-Lemhi10 allele, complete cds Length = 7646 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 7180 accttcaagctatcgagatcaatgatgctgggaatagacttgaaacgg 7133
>gb|DQ191641.1| Solanum tuberosum UDP-glucose pyrophosphorylase-like protein mRNA, complete cds Length = 1671 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1366 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1319
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ggtgggcgggcaggcgggtg 244 |||||||||||||||||||| Sbjct: 98734 ggtgggcgggcaggcgggtg 98753
>ref|XM_754216.1| Ustilago maydis 521 hypothetical protein (UM03162.1) partial mRNA Length = 2046 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gctgtcaagctcgacgatgc 419 |||||||||||||||||||| Sbjct: 526 gctgtcaagctcgacgatgc 545
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gacatcaccagagaccttca 398 |||||||||||||||||||| Sbjct: 114519 gacatcaccagagaccttca 114538
>gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 accagagaccttcaagctgt 404 |||||||||||||||||||| Sbjct: 86344 accagagaccttcaagctgt 86363
>emb|AL162852.14| Human DNA sequence from clone RP11-267I18 on chromosome 13 Contains a novel gene, complete sequence Length = 110166 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gttattatgtaacagggctc 131 |||||||||||||||||||| Sbjct: 97072 gttattatgtaacagggctc 97091
>emb|AL158135.5| Human DNA sequence from clone RP1-304H12 on chromosome 6, complete sequence Length = 64854 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 catcatcatatcatataaccaaaa 43 |||||||||||||||| ||||||| Sbjct: 39074 catcatcatatcatatgaccaaaa 39097
>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the 5' end of the BFSP1 gene for beaded filament structural protein 1 (filensin), the DSTN gene for destrin (actin depolymerizing factor ADF), a ras-like pseudogene, the RRBP1 gene for ribosome binding protein 1 (dog 180 kDa homolog), the 5' end of the C20orf179 gene for chromosome 20 open reading frame 179 and two CpG islands, complete sequence Length = 166001 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ctggcactcccaggaagaac 77 |||||||||||||||||||| Sbjct: 126669 ctggcactcccaggaagaac 126650
>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the Kcnj12 gene for potassium inwardly-rectifying channel subfamily J member 12, a ribosomal protein L27a (Rpl27a) pseudogene, the Tnfrsf13b gene for tumor necrosis factor receptor superfamily member 13b, the Usp22 gene for ubiquitin specific protease 22, a ribosomal protein S13 (Rps13) pseudogene, the Aldh3a1 gene for aldehyde dehydrogenase family 3 subfamily A1, the 3' end of one variant of the Aldh3a2 gene for aldehyde dehydrogenase family 3 subfamily A2 and three CpG islands, complete sequence Length = 241400 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggtgggcgggcaggcgggtg 244 |||||||||||||||||||| Sbjct: 17683 ggtgggcgggcaggcgggtg 17664
>gb|AY942707.1| Streptomyces noursei ATCC 11455 lantibiotic biosynthesis gene cluster, complete sequence Length = 13830 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ggtgggcgggcaggcgggtg 244 |||||||||||||||||||| Sbjct: 5072 ggtgggcgggcaggcgggtg 5091
>gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 map 11, complete sequence Length = 264908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggtgggcgggcaggcgggtg 244 |||||||||||||||||||| Sbjct: 195150 ggtgggcgggcaggcgggtg 195131
>emb|BX004831.16| Zebrafish DNA sequence from clone BUSM1-143H6 in linkage group 7, complete sequence Length = 119156 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 accagagaccttcaagctgt 404 |||||||||||||||||||| Sbjct: 69415 accagagaccttcaagctgt 69434
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tggcatcatcatatcatata 36 |||||||||||||||||||| Sbjct: 3257780 tggcatcatcatatcatata 3257799
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tggcatcatcatatcatata 36 |||||||||||||||||||| Sbjct: 35347 tggcatcatcatatcatata 35366
>emb|Z18924.1|STUDPGPYP S.tuberosum mRNA for UDP-glucose pyrophosphorylase Length = 1683 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1378 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1331
>gb|AC004542.1|AC004542 Homo sapiens PAC clone RP3-430N8 from 22q12.1-qter, complete sequence Length = 134914 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tataaccaaaagaaatttta 52 |||||||||||||||||||| Sbjct: 115041 tataaccaaaagaaatttta 115060
>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7, complete sequence Length = 144689 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 accagagaccttcaagctgt 404 |||||||||||||||||||| Sbjct: 15261 accagagaccttcaagctgt 15280
>gb|AY082623.1| Solanum tuberosum Russet Burbank-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>gb|AY082621.1| Solanum tuberosum Redsen UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>gb|AY082620.1| Solanum tuberosum Norchip UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>gb|AY082619.1| Solanum tuberosum Russet Burbank-1 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>gb|AY082618.1| Solanum tuberosum ND860-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>gb|AY082617.1| Solanum tuberosum Snowden UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1295 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1248
>dbj|D00667.1|POTUDPGP Solanum tuberosum mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1758 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 392 accttcaagctgtcaagctcgacgatgctggggatcgacttgaaacgg 439 ||||||||||| || || || | ||||||||| || |||||||||||| Sbjct: 1434 accttcaagctatctagatcaatgatgctgggaatagacttgaaacgg 1387
>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ggtgggcgggcaggcgggtg 244 |||||||||||||||||||| Sbjct: 135177 ggtgggcgggcaggcgggtg 135196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,368,315 Number of Sequences: 3902068 Number of extensions: 3368315 Number of successful extensions: 65683 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65504 Number of HSP's gapped (non-prelim): 173 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)