| Clone Name | rbaet94a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_148434.2| Arabidopsis thaliana transcription factor AT1G05055 mRNA, complete cds Length = 1464 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ccaaacatgtcgaagctttca 209 ||||||||||||||||||||| Sbjct: 327 ccaaacatgtcgaagctttca 347
>gb|AF499443.1| Arabidopsis thaliana p44/SSL1-like protein mRNA, complete cds Length = 1266 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ccaaacatgtcgaagctttca 209 ||||||||||||||||||||| Sbjct: 323 ccaaacatgtcgaagctttca 343
>emb|BX816023.1|CNS0AD5T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ccaaacatgtcgaagctttca 209 ||||||||||||||||||||| Sbjct: 311 ccaaacatgtcgaagctttca 331
>gb|AC005322.2|T7A14 Arabidopsis thaliana chromosome 1 BAC T7A14 sequence, complete sequence Length = 54157 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ccaaacatgtcgaagctttca 209 ||||||||||||||||||||| Sbjct: 26424 ccaaacatgtcgaagctttca 26444
>ref|XM_788291.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9907-PA (LOC588616), mRNA Length = 5586 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 acgaaaaaatcaaaccaattccac 70 ||||||||||| |||||||||||| Sbjct: 530 acgaaaaaatccaaccaattccac 507
>gb|AC051642.5| Homo sapiens chromosome 8, clone RP11-583M2, complete sequence Length = 174445 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acaccaaggcaaacttttta 154 |||||||||||||||||||| Sbjct: 117528 acaccaaggcaaacttttta 117547
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaggcaaactttttaggccc 159 |||||||||||||||||||| Sbjct: 22453906 aaggcaaactttttaggccc 22453887
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaggcaaactttttaggccc 159 |||||||||||||||||||| Sbjct: 91039 aaggcaaactttttaggccc 91020 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,450,150 Number of Sequences: 3902068 Number of extensions: 2450150 Number of successful extensions: 45126 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45104 Number of HSP's gapped (non-prelim): 22 length of query: 289 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 267 effective length of database: 17,147,199,772 effective search space: 4578302339124 effective search space used: 4578302339124 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)